RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 CHP1Q99653 195 aa4.16□□□□□ -1.74
SFXN1-202ENST00000421887 RBM4BQ9BQ04 359 aaKnown RBP4.16□□□□□ -1.74
SFXN1-202ENST00000421887 BPIFA3Q9BQP9 254 aa4.16□□□□□ -1.74
SFXN1-202ENST00000421887 C1QTNF5Q9BXJ0 243 aa4.16□□□□□ -1.74
SFXN1-202ENST00000421887 FRMD8P1Q9BZ68 369 aaPredicted RBP4.16□□□□□ -1.74
SFXN1-202ENST00000421887 TBL1XR1Q9BZK7 514 aa4.16□□□□□ -1.74
SFXN1-202ENST00000421887 RABEP2Q9H5N1 569 aa4.16□□□□□ -1.74
SFXN1-202ENST00000421887 TMEM185BQ9H7F4 350 aa4.16□□□□□ -1.74
SFXN1-202ENST00000421887 BEX1Q9HBH7 125 aa4.16□□□□□ -1.74
SFXN1-202ENST00000421887 HHATLQ9HCP6 504 aa4.16□□□□□ -1.74
SFXN1-202ENST00000421887 DYNLRB1Q9NP97 96 aa4.16□□□□□ -1.74
SFXN1-202ENST00000421887 CA10Q9NS85 328 aa4.16□□□□□ -1.74
SFXN1-202ENST00000421887 ACSS1Q9NUB1 689 aaPredicted RBP4.16□□□□□ -1.74
SFXN1-202ENST00000421887 MRPL15Q9P015 296 aaKnown RBP4.16□□□□□ -1.74
SFXN1-202ENST00000421887 SENP1Q9P0U3 644 aa4.16□□□□□ -1.74
SFXN1-202ENST00000421887 PEMTQ9UBM1 199 aa4.16□□□□□ -1.74
SFXN1-202ENST00000421887 ZDHHC2Q9UIJ5 367 aa4.16□□□□□ -1.74
SFXN1-202ENST00000421887 MRTO4Q9UKD2 239 aaKnown RBP4.16□□□□□ -1.74
SFXN1-202ENST00000421887 ABCG2Q9UNQ0 655 aa4.16□□□□□ -1.74
SFXN1-202ENST00000421887 OARD1Q9Y530 152 aa4.16□□□□□ -1.74
SFXN1-202ENST00000421887 TRRAPQ9Y4A5 3859 aa4.15□□□□□ -1.74
SFXN1-202ENST00000421887 A0A087WZY1 265 aa4.15□□□□□ -1.75
SFXN1-202ENST00000421887 A0A0J9YW62 118 aa4.15□□□□□ -1.75
SFXN1-202ENST00000421887 LOC100653049A0A140TA62 436 aa4.15□□□□□ -1.75
SFXN1-202ENST00000421887 A0A1B0GUV1 79 aa4.15□□□□□ -1.75
SFXN1-202ENST00000421887 SH3PXD2BA1X283 911 aa4.15□□□□□ -1.75
SFXN1-202ENST00000421887 SDR42E2A6NKP2 422 aa4.15□□□□□ -1.75
SFXN1-202ENST00000421887 C17orf51A8MQB3 221 aa4.15□□□□□ -1.75
SFXN1-202ENST00000421887 PLPP1O14494 284 aa4.15□□□□□ -1.75
SFXN1-202ENST00000421887 TSPAN2O60636 221 aa4.15□□□□□ -1.75
SFXN1-202ENST00000421887 EEDO75530 441 aaKnown RBP4.15□□□□□ -1.75
SFXN1-202ENST00000421887 STK16O75716 305 aa4.15□□□□□ -1.75
SFXN1-202ENST00000421887 KRT34O76011 436 aa4.15□□□□□ -1.75
SFXN1-202ENST00000421887 MPZL1O95297 269 aa4.15□□□□□ -1.75
SFXN1-202ENST00000421887 CRYAAP02489 173 aa4.15□□□□□ -1.75
SFXN1-202ENST00000421887 PRB2P02812 416 aaPredicted RBP4.15□□□□□ -1.75
SFXN1-202ENST00000421887 ATP1B1P05026 303 aa4.15□□□□□ -1.75
SFXN1-202ENST00000421887 CHRM4P08173 479 aa4.15□□□□□ -1.75
SFXN1-202ENST00000421887 OR4A8P0C604 315 aa4.15□□□□□ -1.75
SFXN1-202ENST00000421887 ZSCAN5DPP0CG00 497 aa4.15□□□□□ -1.75
SFXN1-202ENST00000421887 CSNK2A2P19784 350 aaPredicted RBP4.15□□□□□ -1.75
SFXN1-202ENST00000421887 COX5AP20674 150 aa4.15□□□□□ -1.75
SFXN1-202ENST00000421887 OMGP23515 440 aa4.15□□□□□ -1.75
SFXN1-202ENST00000421887 SFTPDP35247 375 aa4.15□□□□□ -1.75
SFXN1-202ENST00000421887 MTNR1AP48039 350 aa4.15□□□□□ -1.75
SFXN1-202ENST00000421887 RFX3P48380 749 aa4.15□□□□□ -1.75
SFXN1-202ENST00000421887 PSMD4P55036 377 aaKnown RBP4.15□□□□□ -1.75
SFXN1-202ENST00000421887 MYBPC1Q00872 1141 aa4.15□□□□□ -1.75
SFXN1-202ENST00000421887 OASLQ15646 514 aaKnown RBP4.15□□□□□ -1.75
SFXN1-202ENST00000421887 TAF9Q16594 264 aa4.15□□□□□ -1.75
SFXN1-202ENST00000421887 GSTA3Q16772 222 aa4.15□□□□□ -1.75
SFXN1-202ENST00000421887 C18orf21Q32NC0 220 aaPredicted RBP4.15□□□□□ -1.75
SFXN1-202ENST00000421887 SAXO2Q658L1 398 aa4.15□□□□□ -1.75
SFXN1-202ENST00000421887 FAM45BPQ6NSW5 357 aa4.15□□□□□ -1.75
SFXN1-202ENST00000421887 ACSM5Q6NUN0 579 aa4.15□□□□□ -1.75
SFXN1-202ENST00000421887 SPSB3Q6PJ21 355 aa4.15□□□□□ -1.75
SFXN1-202ENST00000421887 PEX26Q7Z412 305 aa4.15□□□□□ -1.75
SFXN1-202ENST00000421887 SNX32Q86XE0 403 aa4.15□□□□□ -1.75
SFXN1-202ENST00000421887 RNF10Q8N5U6 811 aaKnown RBP4.15□□□□□ -1.75
SFXN1-202ENST00000421887 ZNF433Q8N7K0 673 aaPredicted RBP4.15□□□□□ -1.75
SFXN1-202ENST00000421887 OR4F5Q8NH21 305 aa4.15□□□□□ -1.75
SFXN1-202ENST00000421887 CLDND2Q8NHS1 167 aa4.15□□□□□ -1.75
SFXN1-202ENST00000421887 FAM110DQ8TAY7 271 aaPredicted RBP4.15□□□□□ -1.75
SFXN1-202ENST00000421887 FAM45AQ8TCE6 357 aa4.15□□□□□ -1.75
SFXN1-202ENST00000421887 C1orf54Q8WWF1 131 aa4.15□□□□□ -1.75
SFXN1-202ENST00000421887 GTF3AQ92664 365 aaKnown RBP4.15□□□□□ -1.75
SFXN1-202ENST00000421887 PDLIM5Q96HC4 596 aaKnown RBP4.15□□□□□ -1.75
SFXN1-202ENST00000421887 ADGRG7Q96K78 797 aa4.15□□□□□ -1.75
SFXN1-202ENST00000421887 BBS4Q96RK4 519 aa4.15□□□□□ -1.75
SFXN1-202ENST00000421887 MTERF1Q99551 399 aaKnown RBP4.15□□□□□ -1.75
SFXN1-202ENST00000421887 SLC30A2Q9BRI3 323 aa4.15□□□□□ -1.75
SFXN1-202ENST00000421887 PLAC1Q9HBJ0 212 aa4.15□□□□□ -1.75
SFXN1-202ENST00000421887 PPANQ9NQ55 473 aaKnown RBP4.15□□□□□ -1.75
SFXN1-202ENST00000421887 PFDN4Q9NQP4 134 aa4.15□□□□□ -1.75
SFXN1-202ENST00000421887 SLC35C2Q9NQQ7 365 aa4.15□□□□□ -1.75
SFXN1-202ENST00000421887 ABHD10Q9NUJ1 306 aa4.15□□□□□ -1.75
SFXN1-202ENST00000421887 TREM2Q9NZC2 230 aa4.15□□□□□ -1.75
SFXN1-202ENST00000421887 MAT2BQ9NZL9 334 aa4.15□□□□□ -1.75
SFXN1-202ENST00000421887 CTNNAL1Q9UBT7 734 aa4.15□□□□□ -1.75
SFXN1-202ENST00000421887 PSME2Q9UL46 239 aa4.15□□□□□ -1.75
SFXN1-202ENST00000421887 AMDHD2Q9Y303 409 aa4.15□□□□□ -1.75
SFXN1-202ENST00000421887 ASB4Q9Y574 426 aa4.15□□□□□ -1.75
SFXN1-202ENST00000421887 SLC25A15Q9Y619 301 aa4.15□□□□□ -1.75
SFXN1-202ENST00000421887 ZNF780BQ9Y6R6 833 aa4.15□□□□□ -1.75
SFXN1-202ENST00000421887 A0A0A6YYD5 115 aa4.14□□□□□ -1.75
SFXN1-202ENST00000421887 ZCWPW2A0A1B0GU75 182 aa4.14□□□□□ -1.75
SFXN1-202ENST00000421887 MIF4GDA9UHW6 222 aaKnown RBP4.14□□□□□ -1.75
SFXN1-202ENST00000421887 B4DXG7 233 aa4.14□□□□□ -1.75
SFXN1-202ENST00000421887 C9JVG2 144 aa4.14□□□□□ -1.75
SFXN1-202ENST00000421887 hCG_2039718K7EN88 272 aa4.14□□□□□ -1.75
SFXN1-202ENST00000421887 LDLRAD4O15165 306 aa4.14□□□□□ -1.75
SFXN1-202ENST00000421887 PGRMC2O15173 223 aa4.14□□□□□ -1.75
SFXN1-202ENST00000421887 IPO7O95373 1038 aaKnown RBP4.14□□□□□ -1.75
SFXN1-202ENST00000421887 TTC4O95801 387 aa4.14□□□□□ -1.75
SFXN1-202ENST00000421887 ANGPTL1O95841 491 aa4.14□□□□□ -1.75
SFXN1-202ENST00000421887 IGHV3-9P01782 118 aa4.14□□□□□ -1.75
SFXN1-202ENST00000421887 GBAP04062 536 aa4.14□□□□□ -1.75
SFXN1-202ENST00000421887 CCDC175P0C221 793 aa4.14□□□□□ -1.75
SFXN1-202ENST00000421887 CT45A8P0DMV1 189 aa4.14□□□□□ -1.75
SFXN1-202ENST00000421887 CT45A9P0DMV2 189 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms