RNA–Protein interactions for RNA: ENST00000420973.5

CHRD-204, Transcript of chordin, humanhuman

TSL 1 (best)

Gene CHRD, Length 3,492 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-204ENST00000420973 C3orf38Q5JPI3 329 aa13.31□□□□□ -0.28
CHRD-204ENST00000420973 FGD2Q7Z6J4 655 aa13.31□□□□□ -0.28
CHRD-204ENST00000420973 CCDC54Q8NEL0 328 aa13.31□□□□□ -0.28
CHRD-204ENST00000420973 TMEM163Q8TC26 289 aa13.31□□□□□ -0.28
CHRD-204ENST00000420973 MMABQ96EY8 250 aaPredicted RBP13.31□□□□□ -0.28
CHRD-204ENST00000420973 CCDC74BQ96LY2 380 aa13.31□□□□□ -0.28
CHRD-204ENST00000420973 METTL9Q9H1A3 318 aa13.31□□□□□ -0.28
CHRD-204ENST00000420973 ELK1P19419 428 aa13.31□□□□□ -0.28
CHRD-204ENST00000420973 CCR9P51686 369 aa13.31□□□□□ -0.28
CHRD-204ENST00000420973 PDZD11Q5EBL8 140 aa13.31□□□□□ -0.28
CHRD-204ENST00000420973 MARCH9Q86YJ5 346 aa13.31□□□□□ -0.28
CHRD-204ENST00000420973 LRRC25Q8N386 305 aaPredicted RBP13.31□□□□□ -0.28
CHRD-204ENST00000420973 SIRT7Q9NRC8 400 aa13.31□□□□□ -0.28
CHRD-204ENST00000420973 RPS6KB2Q9UBS0 482 aa13.31□□□□□ -0.28
CHRD-204ENST00000420973 RIF1Q5UIP0 2472 aaKnown RBP13.31□□□□□ -0.28
CHRD-204ENST00000420973 CENPVL1A0A0U1RR11 272 aa13.3□□□□□ -0.28
CHRD-204ENST00000420973 C2orf92A0A1B0GVN3 265 aa13.3□□□□□ -0.28
CHRD-204ENST00000420973 FAM183AA6NL82 134 aa13.3□□□□□ -0.28
CHRD-204ENST00000420973 H7C1Q1 480 aa13.3□□□□□ -0.28
CHRD-204ENST00000420973 FGF17O60258 216 aa13.3□□□□□ -0.28
CHRD-204ENST00000420973 ENTPD6O75354 484 aa13.3□□□□□ -0.28
CHRD-204ENST00000420973 HTR2AP28223 471 aa13.3□□□□□ -0.28
CHRD-204ENST00000420973 VASPP50552 380 aaPredicted RBP13.3□□□□□ -0.28
CHRD-204ENST00000420973 CRISP1P54107 249 aa13.3□□□□□ -0.28
CHRD-204ENST00000420973 CARD18P57730 90 aa13.3□□□□□ -0.28
CHRD-204ENST00000420973 ODF4Q2M2E3 257 aa13.3□□□□□ -0.28
CHRD-204ENST00000420973 SLC48A1Q6P1K1 146 aa13.3□□□□□ -0.28
CHRD-204ENST00000420973 SLITRK4Q8IW52 837 aa13.3□□□□□ -0.28
CHRD-204ENST00000420973 MCHR1Q99705 422 aa13.3□□□□□ -0.28
CHRD-204ENST00000420973 KCNJ15Q99712 375 aa13.3□□□□□ -0.28
CHRD-204ENST00000420973 MFFQ9GZY8 342 aa13.3□□□□□ -0.28
CHRD-204ENST00000420973 CHST8Q9H2A9 424 aa13.3□□□□□ -0.28
CHRD-204ENST00000420973 SLC38A1Q9H2H9 487 aa13.3□□□□□ -0.28
CHRD-204ENST00000420973 SEBOXQ9HB31 216 aaPredicted RBP13.3□□□□□ -0.28
CHRD-204ENST00000420973 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.3□□□□□ -0.28
CHRD-204ENST00000420973 CHST2Q9Y4C5 530 aa13.3□□□□□ -0.28
CHRD-204ENST00000420973 PLXNA2O75051 1894 aa13.3□□□□□ -0.28
CHRD-204ENST00000420973 TMEM229AB2RXF0 380 aa13.3□□□□□ -0.28
CHRD-204ENST00000420973 YIF1AO95070 293 aa13.3□□□□□ -0.28
CHRD-204ENST00000420973 DRD2P14416 443 aa13.3□□□□□ -0.28
CHRD-204ENST00000420973 NDUFS1P28331 727 aa13.3□□□□□ -0.28
CHRD-204ENST00000420973 STAT5AP42229 794 aa13.3□□□□□ -0.28
CHRD-204ENST00000420973 GFERP55789 205 aa13.3□□□□□ -0.28
CHRD-204ENST00000420973 TGIF1Q15583 401 aa13.3□□□□□ -0.28
CHRD-204ENST00000420973 TMEM35AQ53FP2 167 aa13.3□□□□□ -0.28
CHRD-204ENST00000420973 TMEM71Q6P5X7 295 aa13.3□□□□□ -0.28
CHRD-204ENST00000420973 ZNF561Q8N587 486 aa13.3□□□□□ -0.28
CHRD-204ENST00000420973 UBAC2Q8NBM4 344 aa13.3□□□□□ -0.28
CHRD-204ENST00000420973 TMEM52Q8NDY8 209 aa13.3□□□□□ -0.28
CHRD-204ENST00000420973 ZNF559Q9BR84 538 aa13.3□□□□□ -0.28
CHRD-204ENST00000420973 CDCA4Q9BXL8 241 aa13.3□□□□□ -0.28
CHRD-204ENST00000420973 MMACHCQ9Y4U1 282 aa13.3□□□□□ -0.28
CHRD-204ENST00000420973 TICRRQ7Z2Z1 1910 aa13.3□□□□□ -0.28
CHRD-204ENST00000420973 OR14I1A6ND48 311 aa13.3□□□□□ -0.28
CHRD-204ENST00000420973 PEX12O00623 359 aa13.3□□□□□ -0.28
CHRD-204ENST00000420973 EMC8O43402 210 aa13.3□□□□□ -0.28
CHRD-204ENST00000420973 HLA-DQB1P01920 261 aa13.3□□□□□ -0.28
CHRD-204ENST00000420973 ZNF44P15621 663 aa13.3□□□□□ -0.28
CHRD-204ENST00000420973 RAB4AP20338 218 aa13.3□□□□□ -0.28
CHRD-204ENST00000420973 XCR1P46094 333 aa13.3□□□□□ -0.28
CHRD-204ENST00000420973 HNRNPKP61978 463 aaKnown RBP eCLIP13.3□□□□□ -0.284e-15■■■□□ 17
CHRD-204ENST00000420973 RPS15AP62244 130 aaKnown RBP13.3□□□□□ -0.28
CHRD-204ENST00000420973 MRPS21P82921 87 aaKnown RBP13.3□□□□□ -0.28
CHRD-204ENST00000420973 Q6ZTK2 550 aa13.3□□□□□ -0.28
CHRD-204ENST00000420973 CAMKMTQ7Z624 323 aa13.3□□□□□ -0.28
CHRD-204ENST00000420973 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.3□□□□□ -0.28
CHRD-204ENST00000420973 SIAH3Q8IW03 269 aa13.3□□□□□ -0.28
CHRD-204ENST00000420973 NEIL3Q8TAT5 605 aa13.3□□□□□ -0.28
CHRD-204ENST00000420973 TLNRD1Q9H1K6 362 aa13.3□□□□□ -0.28
CHRD-204ENST00000420973 TMEM38AQ9H6F2 299 aa13.3□□□□□ -0.28
CHRD-204ENST00000420973 KCNIP3Q9Y2W7 256 aa13.3□□□□□ -0.28
CHRD-204ENST00000420973 PRRC2CQ9Y520 2896 aaKnown RBP13.29□□□□□ -0.28
CHRD-204ENST00000420973 SAGP10523 405 aaPredicted RBP13.29□□□□□ -0.28
CHRD-204ENST00000420973 PCBP4P57723 403 aaKnown RBP13.29□□□□□ -0.28
CHRD-204ENST00000420973 ILKQ13418 452 aa13.29□□□□□ -0.28
CHRD-204ENST00000420973 CDNFQ49AH0 187 aa13.29□□□□□ -0.28
CHRD-204ENST00000420973 C1orf189Q5VU69 101 aa13.29□□□□□ -0.28
CHRD-204ENST00000420973 NHLRC1Q6VVB1 395 aa13.29□□□□□ -0.28
CHRD-204ENST00000420973 GPR135Q8IZ08 494 aa13.29□□□□□ -0.28
CHRD-204ENST00000420973 MFSD9Q8NBP5 474 aa13.29□□□□□ -0.28
CHRD-204ENST00000420973 SUN3Q8TAQ9 357 aa13.29□□□□□ -0.28
CHRD-204ENST00000420973 WDR89Q96FK6 387 aaPredicted RBP13.29□□□□□ -0.28
CHRD-204ENST00000420973 EPYCQ99645 322 aa13.29□□□□□ -0.28
CHRD-204ENST00000420973 TAPBPLQ9BX59 468 aa13.29□□□□□ -0.28
CHRD-204ENST00000420973 ZNF471Q9BX82 626 aaPredicted RBP13.29□□□□□ -0.28
CHRD-204ENST00000420973 RSPO3Q9BXY4 272 aaPredicted RBP13.29□□□□□ -0.28
CHRD-204ENST00000420973 TMEM185BQ9H7F4 350 aa13.29□□□□□ -0.28
CHRD-204ENST00000420973 DUSP22Q9NRW4 184 aa13.29□□□□□ -0.28
CHRD-204ENST00000420973 MARCH11A6NNE9 402 aa13.29□□□□□ -0.28
CHRD-204ENST00000420973 PRAMEF26H0Y7S4 382 aa13.29□□□□□ -0.28
CHRD-204ENST00000420973 ZNF593O00488 134 aaPredicted RBP13.29□□□□□ -0.28
CHRD-204ENST00000420973 GNSP15586 552 aa13.29□□□□□ -0.28
CHRD-204ENST00000420973 CNR1P21554 472 aa13.29□□□□□ -0.28
CHRD-204ENST00000420973 ELAVL4P26378 380 aaKnown RBP13.29□□□□□ -0.28
CHRD-204ENST00000420973 OR1D4P47884 311 aa13.29□□□□□ -0.28
CHRD-204ENST00000420973 RAB5CP51148 216 aa13.29□□□□□ -0.28
CHRD-204ENST00000420973 BIKQ13323 160 aa13.29□□□□□ -0.28
CHRD-204ENST00000420973 SURF2Q15527 256 aaPredicted RBP13.29□□□□□ -0.28
CHRD-204ENST00000420973 ZIC1Q15915 447 aa13.29□□□□□ -0.28
CHRD-204ENST00000420973 DUSP5Q16690 384 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms