RNA–Protein interactions for RNA: ENST00000415828.5

CSTF1-202, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 2

Gene CSTF1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-202ENST00000415828 PGRMC1O00264 195 aaKnown RBP4.04□□□□□ -1.76
CSTF1-202ENST00000415828 RAD51CO43502 376 aa4.04□□□□□ -1.76
CSTF1-202ENST00000415828 CHST10O43529 356 aa4.04□□□□□ -1.76
CSTF1-202ENST00000415828 VPS26AO75436 327 aa4.04□□□□□ -1.76
CSTF1-202ENST00000415828 MPZL1O95297 269 aa4.04□□□□□ -1.76
CSTF1-202ENST00000415828 AMBPP02760 352 aa4.04□□□□□ -1.76
CSTF1-202ENST00000415828 GBAP04062 536 aa4.04□□□□□ -1.76
CSTF1-202ENST00000415828 CFC1BP0CG36 223 aa4.04□□□□□ -1.76
CSTF1-202ENST00000415828 CFC1P0CG37 223 aa4.04□□□□□ -1.76
CSTF1-202ENST00000415828 DUX4L2P0CJ85 424 aa4.04□□□□□ -1.76
CSTF1-202ENST00000415828 DUX4L3P0CJ86 424 aa4.04□□□□□ -1.76
CSTF1-202ENST00000415828 DUX4L5P0CJ88 424 aa4.04□□□□□ -1.76
CSTF1-202ENST00000415828 DUX4L6P0CJ89 424 aa4.04□□□□□ -1.76
CSTF1-202ENST00000415828 DUX4L7P0CJ90 424 aa4.04□□□□□ -1.76
CSTF1-202ENST00000415828 TCP1P17987 556 aaKnown RBP4.04□□□□□ -1.76
CSTF1-202ENST00000415828 CPT2P23786 658 aa4.04□□□□□ -1.76
CSTF1-202ENST00000415828 KRTAP5-9P26371 169 aa4.04□□□□□ -1.76
CSTF1-202ENST00000415828 ATP5OP48047 213 aa4.04□□□□□ -1.76
CSTF1-202ENST00000415828 SUCLG1P53597 346 aaKnown RBP4.04□□□□□ -1.76
CSTF1-202ENST00000415828 EIF3EP60228 445 aaKnown RBP4.04□□□□□ -1.76
CSTF1-202ENST00000415828 ITGA9Q13797 1035 aa4.04□□□□□ -1.76
CSTF1-202ENST00000415828 NDUFA9Q16795 377 aa4.04□□□□□ -1.76
CSTF1-202ENST00000415828 KBTBD12Q3ZCT8 623 aa4.04□□□□□ -1.76
CSTF1-202ENST00000415828 PIGGQ5H8A4 983 aa4.04□□□□□ -1.76
CSTF1-202ENST00000415828 C6orf163Q5TEZ5 329 aa4.04□□□□□ -1.76
CSTF1-202ENST00000415828 NCBP2-AS2Q69YL0 99 aa4.04□□□□□ -1.76
CSTF1-202ENST00000415828 SLC35E4Q6ICL7 350 aa4.04□□□□□ -1.76
CSTF1-202ENST00000415828 KRT80Q6KB66 452 aa4.04□□□□□ -1.76
CSTF1-202ENST00000415828 ZNF544Q6NX49 715 aa4.04□□□□□ -1.76
CSTF1-202ENST00000415828 DUX4L9Q6RFH8 374 aaPredicted RBP4.04□□□□□ -1.76
CSTF1-202ENST00000415828 CES3Q6UWW8 571 aa4.04□□□□□ -1.76
CSTF1-202ENST00000415828 HSDL2Q6YN16 418 aa4.04□□□□□ -1.76
CSTF1-202ENST00000415828 PTOV1Q86YD1 416 aa4.04□□□□□ -1.76
CSTF1-202ENST00000415828 UBQLNLQ8IYU4 475 aa4.04□□□□□ -1.76
CSTF1-202ENST00000415828 ZNF786Q8N393 782 aa4.04□□□□□ -1.76
CSTF1-202ENST00000415828 ACTL9Q8TC94 416 aa4.04□□□□□ -1.76
CSTF1-202ENST00000415828 MCOLN3Q8TDD5 553 aa4.04□□□□□ -1.76
CSTF1-202ENST00000415828 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.04□□□□□ -1.76
CSTF1-202ENST00000415828 PTPMT1Q8WUK0 201 aaPredicted RBP4.04□□□□□ -1.76
CSTF1-202ENST00000415828 MAGOHBQ96A72 148 aaKnown RBP4.04□□□□□ -1.76
CSTF1-202ENST00000415828 SPACA9Q96E40 222 aaPredicted RBP4.04□□□□□ -1.76
CSTF1-202ENST00000415828 RILPQ96NA2 401 aa4.04□□□□□ -1.76
CSTF1-202ENST00000415828 DUX3Q96PT4 197 aa4.04□□□□□ -1.76
CSTF1-202ENST00000415828 RNF157Q96PX1 679 aa4.04□□□□□ -1.76
CSTF1-202ENST00000415828 PSD2Q9BQI7 771 aa4.04□□□□□ -1.76
CSTF1-202ENST00000415828 MRPL1Q9BYD6 325 aaKnown RBP4.04□□□□□ -1.76
CSTF1-202ENST00000415828 DPH5Q9H2P9 285 aa4.04□□□□□ -1.76
CSTF1-202ENST00000415828 RBM22Q9NW64 420 aaKnown RBP eCLIP4.04□□□□□ -1.76
CSTF1-202ENST00000415828 PLEK2Q9NYT0 353 aa4.04□□□□□ -1.76
CSTF1-202ENST00000415828 DUX4Q9UBX2 424 aa4.04□□□□□ -1.76
CSTF1-202ENST00000415828 FETUBQ9UGM5 382 aa4.04□□□□□ -1.76
CSTF1-202ENST00000415828 AMACRQ9UHK6 382 aa4.04□□□□□ -1.76
CSTF1-202ENST00000415828 IKBKGQ9Y6K9 419 aa4.04□□□□□ -1.76
CSTF1-202ENST00000415828 PRSS21Q9Y6M0 314 aa4.04□□□□□ -1.76
CSTF1-202ENST00000415828 A0A1W2PPI3 338 aa4.03□□□□□ -1.76
CSTF1-202ENST00000415828 OR2M5A3KFT3 312 aa4.03□□□□□ -1.76
CSTF1-202ENST00000415828 CTAGE15A4D2H0 777 aa4.03□□□□□ -1.76
CSTF1-202ENST00000415828 DUXAA6NLW8 204 aa4.03□□□□□ -1.76
CSTF1-202ENST00000415828 E9PQ18 207 aa4.03□□□□□ -1.76
CSTF1-202ENST00000415828 KCNK1O00180 336 aa4.03□□□□□ -1.76
CSTF1-202ENST00000415828 ERLIN1O75477 346 aa4.03□□□□□ -1.76
CSTF1-202ENST00000415828 PRKRAO75569 313 aaKnown RBP4.03□□□□□ -1.76
CSTF1-202ENST00000415828 LY6G6CO95867 125 aa4.03□□□□□ -1.76
CSTF1-202ENST00000415828 IFNB1P01574 187 aa4.03□□□□□ -1.76
CSTF1-202ENST00000415828 IGFBP1P08833 259 aaPredicted RBP4.03□□□□□ -1.76
CSTF1-202ENST00000415828 CCDC159P0C7I6 412 aa4.03□□□□□ -1.76
CSTF1-202ENST00000415828 RBMY1CP0DJD4 496 aa4.03□□□□□ -1.76
CSTF1-202ENST00000415828 IGHV4-38-2P0DP08 117 aa4.03□□□□□ -1.76
CSTF1-202ENST00000415828 SAGP10523 405 aaPredicted RBP4.03□□□□□ -1.76
CSTF1-202ENST00000415828 DESP17661 470 aa4.03□□□□□ -1.76
CSTF1-202ENST00000415828 COILP38432 576 aaPredicted RBP4.03□□□□□ -1.76
CSTF1-202ENST00000415828 SLC6A8P48029 635 aa4.03□□□□□ -1.76
CSTF1-202ENST00000415828 GLIPR1P48060 266 aa4.03□□□□□ -1.76
CSTF1-202ENST00000415828 CRIP2P52943 208 aaPredicted RBP4.03□□□□□ -1.76
CSTF1-202ENST00000415828 CKAP4Q07065 602 aaKnown RBP4.03□□□□□ -1.76
CSTF1-202ENST00000415828 EGFEM1PQ0D2K5 195 aa4.03□□□□□ -1.76
CSTF1-202ENST00000415828 CAMK2DQ13557 499 aa4.03□□□□□ -1.76
CSTF1-202ENST00000415828 PPA1Q15181 289 aa4.03□□□□□ -1.76
CSTF1-202ENST00000415828 STK11Q15831 433 aa4.03□□□□□ -1.76
CSTF1-202ENST00000415828 DPYSL2Q16555 572 aa4.03□□□□□ -1.76
CSTF1-202ENST00000415828 WHAMMP3Q1A5X7 153 aa4.03□□□□□ -1.76
CSTF1-202ENST00000415828 NSUN5P1Q3KNT7 163 aa4.03□□□□□ -1.76
CSTF1-202ENST00000415828 BOLA3Q53S33 107 aa4.03□□□□□ -1.76
CSTF1-202ENST00000415828 WDR38Q5JTN6 314 aa4.03□□□□□ -1.76
CSTF1-202ENST00000415828 LRRC38Q5VT99 294 aa4.03□□□□□ -1.76
CSTF1-202ENST00000415828 TMEM64Q6YI46 380 aa4.03□□□□□ -1.76
CSTF1-202ENST00000415828 ZNF534Q76KX8 674 aa4.03□□□□□ -1.76
CSTF1-202ENST00000415828 CTAGE6Q86UF2 777 aa4.03□□□□□ -1.76
CSTF1-202ENST00000415828 GABRG1Q8N1C3 465 aa4.03□□□□□ -1.76
CSTF1-202ENST00000415828 CCNYQ8ND76 341 aa4.03□□□□□ -1.76
CSTF1-202ENST00000415828 SPATA4Q8NEY3 305 aa4.03□□□□□ -1.76
CSTF1-202ENST00000415828 OR6K3Q8NGY3 331 aa4.03□□□□□ -1.76
CSTF1-202ENST00000415828 ZNF473Q8WTR7 871 aaKnown RBP4.03□□□□□ -1.76
CSTF1-202ENST00000415828 ZNF524Q96C55 264 aa4.03□□□□□ -1.76
CSTF1-202ENST00000415828 C17orf77Q96MU5 243 aa4.03□□□□□ -1.76
CSTF1-202ENST00000415828 INPP5KQ9BT40 448 aa4.03□□□□□ -1.76
CSTF1-202ENST00000415828 PINK1Q9BXM7 581 aa4.03□□□□□ -1.76
CSTF1-202ENST00000415828 RTN4RQ9BZR6 473 aa4.03□□□□□ -1.76
CSTF1-202ENST00000415828 OPA3Q9H6K4 179 aa4.03□□□□□ -1.76
CSTF1-202ENST00000415828 ANKHQ9HCJ1 492 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms