RNA–Protein interactions for RNA: ENST00000397024.1

MCF2L-207, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5 BASIC

Gene MCF2L, Length 490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-207ENST00000397024 SLC46A3Q7Z3Q1 461 aa16.31■□□□□ 0.2
MCF2L-207ENST00000397024 ZCCHC24Q8N2G6 241 aaKnown RBP16.31■□□□□ 0.2
MCF2L-207ENST00000397024 LRRC17Q8N6Y2 441 aa16.31■□□□□ 0.2
MCF2L-207ENST00000397024 OR5J2Q8NH18 312 aa16.31■□□□□ 0.2
MCF2L-207ENST00000397024 MS4A3Q96HJ5 214 aa16.31■□□□□ 0.2
MCF2L-207ENST00000397024 ZNF75AQ96N20 296 aa16.31■□□□□ 0.2
MCF2L-207ENST00000397024 DOK1Q99704 481 aa16.31■□□□□ 0.2
MCF2L-207ENST00000397024 NANOGQ9H9S0 305 aa16.31■□□□□ 0.2
MCF2L-207ENST00000397024 ZNF224Q9NZL3 707 aa16.31■□□□□ 0.2
MCF2L-207ENST00000397024 PDE5AO76074 875 aa16.3■□□□□ 0.2
MCF2L-207ENST00000397024 CH25HO95992 272 aa16.3■□□□□ 0.2
MCF2L-207ENST00000397024 MT-ATP6P00846 226 aa16.3■□□□□ 0.2
MCF2L-207ENST00000397024 CSF3P09919 207 aa16.3■□□□□ 0.2
MCF2L-207ENST00000397024 ADORA3P0DMS8 318 aa16.3■□□□□ 0.2
MCF2L-207ENST00000397024 PDLIM4P50479 330 aa16.3■□□□□ 0.2
MCF2L-207ENST00000397024 PIGFQ07326 219 aa16.3■□□□□ 0.2
MCF2L-207ENST00000397024 SF3A3Q12874 501 aaKnown RBP eCLIP16.3■□□□□ 0.2
MCF2L-207ENST00000397024 ZNF74Q16587 644 aa16.3■□□□□ 0.2
MCF2L-207ENST00000397024 MSMPQ1L6U9 139 aa16.3■□□□□ 0.2
MCF2L-207ENST00000397024 RABL3Q5HYI8 236 aa16.3■□□□□ 0.2
MCF2L-207ENST00000397024 METTL21CQ5VZV1 264 aa16.3■□□□□ 0.2
MCF2L-207ENST00000397024 ZNF627Q7L945 461 aa16.3■□□□□ 0.2
MCF2L-207ENST00000397024 PATL1Q86TB9 770 aaKnown RBP16.3■□□□□ 0.2
MCF2L-207ENST00000397024 CCDC36Q8IYA8 594 aa16.3■□□□□ 0.2
MCF2L-207ENST00000397024 OR6N1Q8NGY5 312 aa16.3■□□□□ 0.2
MCF2L-207ENST00000397024 ADAMTS16Q8TE57 1224 aa16.3■□□□□ 0.2
MCF2L-207ENST00000397024 TMEM120AQ9BXJ8 343 aa16.3■□□□□ 0.2
MCF2L-207ENST00000397024 ZNF442Q9H7R0 627 aa16.3■□□□□ 0.2
MCF2L-207ENST00000397024 MOV10Q9HCE1 1003 aaKnown RBP16.3■□□□□ 0.2
MCF2L-207ENST00000397024 TAS2R5Q9NYW4 299 aa16.3■□□□□ 0.2
MCF2L-207ENST00000397024 SLC7A7Q9UM01 511 aa16.3■□□□□ 0.2
MCF2L-207ENST00000397024 USP22Q9UPT9 525 aa16.3■□□□□ 0.2
MCF2L-207ENST00000397024 ZNF726A6NNF4 738 aa16.29■□□□□ 0.2
MCF2L-207ENST00000397024 CD79AP11912 226 aa16.29■□□□□ 0.2
MCF2L-207ENST00000397024 IFNGR1P15260 489 aa16.29■□□□□ 0.2
MCF2L-207ENST00000397024 NPR2P20594 1047 aa16.29■□□□□ 0.2
MCF2L-207ENST00000397024 NR4A2P43354 598 aa16.29■□□□□ 0.2
MCF2L-207ENST00000397024 BIDP55957 195 aa16.29■□□□□ 0.2
MCF2L-207ENST00000397024 LSM11P83369 360 aaKnown RBP eCLIP16.29■□□□□ 0.2
MCF2L-207ENST00000397024 VMACQ2NL98 169 aa16.29■□□□□ 0.2
MCF2L-207ENST00000397024 ZNF813Q6ZN06 617 aa16.29■□□□□ 0.2
MCF2L-207ENST00000397024 SVOPLQ8N434 492 aa16.29■□□□□ 0.2
MCF2L-207ENST00000397024 FGFBP3Q8TAT2 258 aa16.29■□□□□ 0.2
MCF2L-207ENST00000397024 PRSS27Q9BQR3 290 aa16.29■□□□□ 0.2
MCF2L-207ENST00000397024 POFUT2Q9Y2G5 429 aa16.29■□□□□ 0.2
MCF2L-207ENST00000397024 SH3PXD2BA1X283 911 aa16.28■□□□□ 0.2
MCF2L-207ENST00000397024 TRAPPC13A5PLN9 417 aa16.28■□□□□ 0.2
MCF2L-207ENST00000397024 hCG_2039718K7EN88 272 aa16.28■□□□□ 0.2
MCF2L-207ENST00000397024 FXYD1O00168 92 aa16.28■□□□□ 0.2
MCF2L-207ENST00000397024 B4GALT1P15291 398 aa16.28■□□□□ 0.2
MCF2L-207ENST00000397024 ZNF14P17017 642 aaPredicted RBP16.28■□□□□ 0.2
MCF2L-207ENST00000397024 TNFRSF1BP20333 461 aa16.28■□□□□ 0.2
MCF2L-207ENST00000397024 ZP4Q12836 540 aa16.28■□□□□ 0.2
MCF2L-207ENST00000397024 GGTLC2Q14390 218 aa16.28■□□□□ 0.2
MCF2L-207ENST00000397024 CARTPTQ16568 116 aa16.28■□□□□ 0.2
MCF2L-207ENST00000397024 TRMT5Q32P41 509 aaKnown RBP16.28■□□□□ 0.2
MCF2L-207ENST00000397024 CYB5R2Q6BCY4 276 aa16.28■□□□□ 0.2
MCF2L-207ENST00000397024 TTC33Q6PID6 262 aaPredicted RBP16.28■□□□□ 0.2
MCF2L-207ENST00000397024 CCDC80Q76M96 950 aa16.28■□□□□ 0.2
MCF2L-207ENST00000397024 CXXC5Q7LFL8 322 aaKnown RBP16.28■□□□□ 0.2
MCF2L-207ENST00000397024 SPATA21Q7Z572 469 aa16.28■□□□□ 0.2
MCF2L-207ENST00000397024 CALHM3Q86XJ0 350 aa16.28■□□□□ 0.2
MCF2L-207ENST00000397024 SLC30A8Q8IWU4 369 aa16.28■□□□□ 0.2
MCF2L-207ENST00000397024 IL17RDQ8NFM7 739 aa16.28■□□□□ 0.2
MCF2L-207ENST00000397024 TMEM54Q969K7 222 aa16.28■□□□□ 0.2
MCF2L-207ENST00000397024 KCNK17Q96T54 332 aa16.28■□□□□ 0.2
MCF2L-207ENST00000397024 SIKE1Q9BRV8 207 aa16.28■□□□□ 0.2
MCF2L-207ENST00000397024 ZNF426Q9BUY5 554 aa16.28■□□□□ 0.2
MCF2L-207ENST00000397024 ULBP2Q9BZM5 246 aa16.28■□□□□ 0.2
MCF2L-207ENST00000397024 PCDHAC1Q9H158 963 aa16.28■□□□□ 0.2
MCF2L-207ENST00000397024 B3GAT2Q9NPZ5 323 aa16.28■□□□□ 0.2
MCF2L-207ENST00000397024 FKBP7Q9Y680 259 aa16.28■□□□□ 0.2
MCF2L-207ENST00000397024 IGHV4-61A0A0C4DH41 118 aa16.27■□□□□ 0.2
MCF2L-207ENST00000397024 KPNA4O00629 521 aaPredicted RBP16.27■□□□□ 0.2
MCF2L-207ENST00000397024 PATE4P0C8F1 98 aa16.27■□□□□ 0.2
MCF2L-207ENST00000397024 ZNF35P13682 527 aa16.27■□□□□ 0.2
MCF2L-207ENST00000397024 NR4A1P22736 598 aa16.27■□□□□ 0.2
MCF2L-207ENST00000397024 CSNK1A1P48729 337 aa16.27■□□□□ 0.2
MCF2L-207ENST00000397024 PPOXP50336 477 aa16.27■□□□□ 0.2
MCF2L-207ENST00000397024 SNTB2Q13425 540 aaKnown RBP16.27■□□□□ 0.2
MCF2L-207ENST00000397024 CYLC2Q14093 348 aaPredicted RBP16.27■□□□□ 0.2
MCF2L-207ENST00000397024 DAG1Q14118 895 aa16.27■□□□□ 0.2
MCF2L-207ENST00000397024 GSG1Q2KHT4 349 aa16.27■□□□□ 0.2
MCF2L-207ENST00000397024 CHRFAM7AQ494W8 412 aa16.27■□□□□ 0.2
MCF2L-207ENST00000397024 KRT80Q6KB66 452 aa16.27■□□□□ 0.2
MCF2L-207ENST00000397024 CGB2Q6NT52 195 aa16.27■□□□□ 0.2
MCF2L-207ENST00000397024 LRFN4Q6PJG9 635 aa16.27■□□□□ 0.2
MCF2L-207ENST00000397024 SLC35D2Q76EJ3 337 aa16.27■□□□□ 0.2
MCF2L-207ENST00000397024 CDK20Q8IZL9 346 aa16.27■□□□□ 0.2
MCF2L-207ENST00000397024 ARIH2OSQ8N7S6 290 aa16.27■□□□□ 0.2
MCF2L-207ENST00000397024 SLC26A7Q8TE54 656 aa16.27■□□□□ 0.2
MCF2L-207ENST00000397024 LRRC58Q96CX6 371 aa16.27■□□□□ 0.2
MCF2L-207ENST00000397024 FOXB1Q99853 325 aa16.27■□□□□ 0.2
MCF2L-207ENST00000397024 MEPEQ9NQ76 525 aaPredicted RBP16.27■□□□□ 0.2
MCF2L-207ENST00000397024 ARGLU1Q9NWB6 273 aaPredicted RBP16.27■□□□□ 0.2
MCF2L-207ENST00000397024 LOC390937A0A1W2PQ73 354 aa16.26■□□□□ 0.19
MCF2L-207ENST00000397024 NDUFS8O00217 210 aa16.26■□□□□ 0.19
MCF2L-207ENST00000397024 SHOX2O60902 331 aaPredicted RBP16.26■□□□□ 0.19
MCF2L-207ENST00000397024 OR6A2O95222 327 aa16.26■□□□□ 0.19
MCF2L-207ENST00000397024 ZNF16P17020 682 aaPredicted RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms