RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 SLC38A3Q99624 504 aa10.12□□□□□ -0.79
CCDC40-203ENST00000374877 EVA1AQ9H8M9 152 aa10.12□□□□□ -0.79
CCDC40-203ENST00000374877 EXOSC3Q9NQT5 275 aaKnown RBP10.12□□□□□ -0.79
CCDC40-203ENST00000374877 PCDHB16Q9NRJ7 776 aa10.12□□□□□ -0.79
CCDC40-203ENST00000374877 DUSP22Q9NRW4 184 aa10.12□□□□□ -0.79
CCDC40-203ENST00000374877 FBXL21Q9UKT6 434 aa10.12□□□□□ -0.79
CCDC40-203ENST00000374877 DAPP1Q9UN19 280 aa10.12□□□□□ -0.79
CCDC40-203ENST00000374877 REV3LO60673 3130 aa10.12□□□□□ -0.79
CCDC40-203ENST00000374877 ALPK2Q86TB3 2170 aa10.11□□□□□ -0.79
CCDC40-203ENST00000374877 TBC1D3DA0A087WVF3 549 aa10.11□□□□□ -0.79
CCDC40-203ENST00000374877 TBC1D3IA0A087WXS9 549 aa10.11□□□□□ -0.79
CCDC40-203ENST00000374877 OR6C74A6NCV1 312 aa10.11□□□□□ -0.79
CCDC40-203ENST00000374877 PRR32B1ATL7 298 aa10.11□□□□□ -0.79
CCDC40-203ENST00000374877 TBC1D3LB9A6J9 549 aa10.11□□□□□ -0.79
CCDC40-203ENST00000374877 P2RX6O15547 441 aa10.11□□□□□ -0.79
CCDC40-203ENST00000374877 TBC1D3HP0C7X1 549 aa10.11□□□□□ -0.79
CCDC40-203ENST00000374877 CALCBP10092 127 aa10.11□□□□□ -0.79
CCDC40-203ENST00000374877 ERVK-25P63136 954 aa10.11□□□□□ -0.79
CCDC40-203ENST00000374877 IL10RAQ13651 578 aa10.11□□□□□ -0.79
CCDC40-203ENST00000374877 GRM7Q14831 915 aa10.11□□□□□ -0.79
CCDC40-203ENST00000374877 FAM74A1Q5RGS3 127 aa10.11□□□□□ -0.79
CCDC40-203ENST00000374877 TBC1D3CQ6IPX1 549 aa10.11□□□□□ -0.79
CCDC40-203ENST00000374877 SLC35F3Q8IY50 421 aa10.11□□□□□ -0.79
CCDC40-203ENST00000374877 DND1Q8IYX4 353 aaKnown RBP10.11□□□□□ -0.79
CCDC40-203ENST00000374877 TBC1D3Q8IZP1 549 aaPredicted RBP10.11□□□□□ -0.79
CCDC40-203ENST00000374877 MRPS24Q96EL2 167 aaKnown RBP10.11□□□□□ -0.79
CCDC40-203ENST00000374877 FGF17O60258 216 aa10.11□□□□□ -0.79
CCDC40-203ENST00000374877 BRINP1O60477 761 aa10.11□□□□□ -0.79
CCDC40-203ENST00000374877 CBX7O95931 251 aa10.11□□□□□ -0.79
CCDC40-203ENST00000374877 GTF2F2P13984 249 aa10.11□□□□□ -0.79
CCDC40-203ENST00000374877 ADRA2CP18825 462 aa10.11□□□□□ -0.79
CCDC40-203ENST00000374877 RPS15AP62244 130 aaKnown RBP10.11□□□□□ -0.79
CCDC40-203ENST00000374877 GUCA2AQ02747 115 aa10.11□□□□□ -0.79
CCDC40-203ENST00000374877 GGTLC2Q14390 218 aa10.11□□□□□ -0.79
CCDC40-203ENST00000374877 USP53Q70EK8 1073 aa10.11□□□□□ -0.79
CCDC40-203ENST00000374877 SLC36A1Q7Z2H8 476 aa10.11□□□□□ -0.79
CCDC40-203ENST00000374877 OR51S1Q8NGJ8 323 aa10.11□□□□□ -0.79
CCDC40-203ENST00000374877 Q96M85 177 aa10.11□□□□□ -0.79
CCDC40-203ENST00000374877 UTP23Q9BRU9 249 aaKnown RBP10.11□□□□□ -0.79
CCDC40-203ENST00000374877 PRDM6Q9NQX0 595 aa10.11□□□□□ -0.79
CCDC40-203ENST00000374877 TMEM72A0PK05 275 aa10.11□□□□□ -0.79
CCDC40-203ENST00000374877 GLSO94925 669 aaPredicted RBP10.11□□□□□ -0.79
CCDC40-203ENST00000374877 CALCRP30988 508 aa10.11□□□□□ -0.79
CCDC40-203ENST00000374877 CCR5P51681 352 aa10.11□□□□□ -0.79
CCDC40-203ENST00000374877 ZNF169Q14929 603 aaPredicted RBP10.11□□□□□ -0.79
CCDC40-203ENST00000374877 UBXN2BQ14CS0 331 aa10.11□□□□□ -0.79
CCDC40-203ENST00000374877 ELP2Q6IA86 826 aa10.11□□□□□ -0.79
CCDC40-203ENST00000374877 FAM220AQ7Z4H9 259 aa10.11□□□□□ -0.79
CCDC40-203ENST00000374877 PAQR7Q86WK9 346 aa10.11□□□□□ -0.79
CCDC40-203ENST00000374877 OR5AK2Q8NH90 309 aa10.11□□□□□ -0.79
CCDC40-203ENST00000374877 TSSK2Q96PF2 358 aa10.11□□□□□ -0.79
CCDC40-203ENST00000374877 SERINC2Q96SA4 455 aa10.11□□□□□ -0.79
CCDC40-203ENST00000374877 PELOQ9BRX2 385 aaKnown RBP10.11□□□□□ -0.79
CCDC40-203ENST00000374877 TIMM29Q9BSF4 260 aa10.11□□□□□ -0.79
CCDC40-203ENST00000374877 IER2Q9BTL4 223 aa10.11□□□□□ -0.79
CCDC40-203ENST00000374877 SAV1Q9H4B6 383 aaPredicted RBP10.11□□□□□ -0.79
CCDC40-203ENST00000374877 EXO5Q9H790 373 aa10.11□□□□□ -0.79
CCDC40-203ENST00000374877 MKKSQ9NPJ1 570 aaPredicted RBP10.11□□□□□ -0.79
CCDC40-203ENST00000374877 MRTO4Q9UKD2 239 aaKnown RBP10.11□□□□□ -0.79
CCDC40-203ENST00000374877 CDV3Q9UKY7 258 aaKnown RBP10.11□□□□□ -0.79
CCDC40-203ENST00000374877 ENTPD2Q9Y5L3 495 aa10.11□□□□□ -0.79
CCDC40-203ENST00000374877 A0A1B0GTH9 108 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 C4orf47A7E2U8 309 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 KCNJ13O60928 360 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 CTNSO60931 367 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 WDPCPO95876 746 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 CD1AP06126 327 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 IGFALSP35858 605 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 HYAL4Q2M3T9 481 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 Q499Y3 187 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 FHL5Q5TD97 284 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 LRRN1Q6UXK5 716 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 NPEPL1Q8NDH3 523 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 PXT1Q8NFP0 134 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 TSTD1Q8NFU3 115 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 OR10K1Q8NGX5 313 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 OR10Z1Q8NGY1 313 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 DUSP19Q8WTR2 217 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 C15orf40Q8WUR7 153 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 DVL3Q92997 716 aaPredicted RBP10.1□□□□□ -0.79
CCDC40-203ENST00000374877 CLDN23Q96B33 292 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 LRRC46Q96FV0 321 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 IKZF2Q9UKS7 526 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 FAM74A7A6NL05 159 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 CT62P0C5K7 136 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 ACHEP22303 614 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 MECP2P51608 486 aaKnown RBP10.1□□□□□ -0.79
CCDC40-203ENST00000374877 FAM74A3Q4VXF1 159 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 LEG1Q6P5S2 330 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 KIRREL2Q6UWL6 708 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 PRSS41Q7RTY9 318 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 NSMAFQ92636 917 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 TRIM2Q9C040 744 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 CHST6Q9GZX3 395 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 SLC6A15Q9H2J7 730 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 RXFP3Q9NSD7 469 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 TAS2R3Q9NYW6 316 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 MOKQ9UQ07 419 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 H0YC42 278 aa10.1□□□□□ -0.79
CCDC40-203ENST00000374877 H7C417 338 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms