RNA–Protein interactions for RNA: ENST00000628124.2

GABRB3-216, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2 BASIC

Gene GABRB3, Length 5,581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-216ENST00000628124 WDR76Q9H967 626 aa8.3□□□□□ -1.08
GABRB3-216ENST00000628124 UFSP2Q9NUQ7 469 aa8.3□□□□□ -1.08
GABRB3-216ENST00000628124 UGT2A1Q9Y4X1 527 aa8.3□□□□□ -1.08
GABRB3-216ENST00000628124 TRAV36DV7A0A075B6V5 113 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 DBX1A6NMT0 343 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 ABCD4O14678 606 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 XRCC3O43542 346 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 ZNF207O43670 478 aaKnown RBP8.29□□□□□ -1.08
GABRB3-216ENST00000628124 TCN2P20062 427 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 ZNF90Q03938 601 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 RAB6CQ53S08 254 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 FAM26DQ5JW98 314 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 IER5LQ5T953 404 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 KCTD11Q693B1 232 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 ZNF425Q6IV72 752 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 GLIS1Q8NBF1 620 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 ISG20Q96AZ6 181 aaKnown RBP8.29□□□□□ -1.08
GABRB3-216ENST00000628124 CPPED1Q9BRF8 314 aaPredicted RBP8.29□□□□□ -1.08
GABRB3-216ENST00000628124 DUSP22Q9NRW4 184 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 ZMAT5Q9UDW3 170 aaKnown RBP8.29□□□□□ -1.08
GABRB3-216ENST00000628124 TRAV27A0A087WT01 109 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 ARPC3O15145 178 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 GALR2O43603 387 aaPredicted RBP8.29□□□□□ -1.08
GABRB3-216ENST00000628124 CIDEAO60543 219 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 HIST1H1TP22492 207 aaPredicted RBP8.29□□□□□ -1.08
GABRB3-216ENST00000628124 SSTR2P30874 369 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 MRPL19P49406 292 aaKnown RBP8.29□□□□□ -1.08
GABRB3-216ENST00000628124 RAB38P57729 211 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 UBE2IP63279 158 aaKnown RBP8.29□□□□□ -1.08
GABRB3-216ENST00000628124 CDK5Q00535 292 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 VAMP3Q15836 100 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 PXDC1Q5TGL8 231 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 ISCA2Q86U28 154 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 C12orf76Q8N812 135 aaPredicted RBP8.29□□□□□ -1.08
GABRB3-216ENST00000628124 OR6M1Q8NGM8 313 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 MARC2Q969Z3 335 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 INPP5KQ9BT40 448 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 ALG12Q9BV10 488 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 IKZF5Q9H5V7 419 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 LIN7CQ9NUP9 197 aaKnown RBP8.29□□□□□ -1.08
GABRB3-216ENST00000628124 DIP2BQ9P265 1576 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 SERTM2A0A1B0GWG4 89 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 TNFRSF1BP20333 461 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 MTNR1BP49286 362 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 MEOX1P50221 254 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 AGFG1P52594 562 aaKnown RBP8.29□□□□□ -1.08
GABRB3-216ENST00000628124 CARD18P57730 90 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 ZNF761Q86XN6 746 aaPredicted RBP8.29□□□□□ -1.08
GABRB3-216ENST00000628124 NAXDQ8IW45 347 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 DTWD1Q8N5C7 304 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 OR52E1Q8NGJ3 308 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 OR6K3Q8NGY3 331 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 OR10J5Q8NHC4 309 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 HLA-CQ95604 372 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 FBXL2Q9UKC9 423 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 GABRQQ9UN88 632 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 POLDIP2Q9Y2S7 368 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 MRPS2Q9Y399 296 aaKnown RBP8.29□□□□□ -1.08
GABRB3-216ENST00000628124 PTGDR2Q9Y5Y4 395 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 NID2Q14112 1375 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 CD38P28907 300 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 TRIM23P36406 574 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 GDNFP39905 211 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 ETV1P50549 477 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 ERHP84090 104 aaKnown RBP8.29□□□□□ -1.08
GABRB3-216ENST00000628124 ALKAL2Q6UX46 152 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 ZNF813Q6ZN06 617 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 ADIPOR2Q86V24 386 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 MDGA1Q8NFP4 955 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 OR2T11Q8NH01 316 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 LYSMD1Q96S90 227 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 NTMT1Q9BV86 223 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 ULBP3Q9BZM4 244 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 TGIF2Q9GZN2 237 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 BCO1Q9HAY6 547 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 ZCWPW2A0A1B0GU75 182 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 ZFP92A6NM28 416 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 TERTO14746 1132 aaKnown RBP8.29□□□□□ -1.08
GABRB3-216ENST00000628124 DEGS1O15121 323 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 SIGLEC6O43699 453 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 PRICKLE3O43900 615 aaPredicted RBP8.29□□□□□ -1.08
GABRB3-216ENST00000628124 M6PRP20645 277 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 SSTR4P31391 388 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 TNFSF8P32971 234 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 SIRPAP78324 504 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 GABREP78334 506 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 C9orf135Q5VTT2 229 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 STEAP1BQ6NZ63 245 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 DNAJC5GQ8N7S2 189 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 HSD17B11Q8NBQ5 300 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 OR5M8Q8NGP6 311 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 TFAP2CQ92754 450 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 ADIPOR1Q96A54 375 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 CTDSP1Q9GZU7 261 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 PIGMQ9H3S5 423 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 C5AR2Q9P296 337 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 LRIT1Q9P2V4 623 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 POMT1Q9Y6A1 747 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 ARL2-SNX15V9GYD0 113 aa8.29□□□□□ -1.08
GABRB3-216ENST00000628124 ST8SIA3O43173 380 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms