RNA–Protein interactions for RNA: ENST00000586119.1

LIG3-207, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-207ENST00000586119 NUP37Q8NFH4 326 aa10.03□□□□□ -0.8
LIG3-207ENST00000586119 OR4F15Q8NGB8 312 aa10.03□□□□□ -0.8
LIG3-207ENST00000586119 MFSD8Q8NHS3 518 aa10.03□□□□□ -0.8
LIG3-207ENST00000586119 STK35Q8TDR2 534 aa10.03□□□□□ -0.8
LIG3-207ENST00000586119 UBASH3BQ8TF42 649 aa10.03□□□□□ -0.8
LIG3-207ENST00000586119 MAL2Q969L2 176 aa10.03□□□□□ -0.8
LIG3-207ENST00000586119 TAAR8Q969N4 342 aa10.03□□□□□ -0.8
LIG3-207ENST00000586119 MS4A3Q96HJ5 214 aa10.03□□□□□ -0.8
LIG3-207ENST00000586119 TXNDC15Q96J42 360 aa10.03□□□□□ -0.8
LIG3-207ENST00000586119 EMC6Q9BV81 110 aa10.03□□□□□ -0.8
LIG3-207ENST00000586119 SPATA9Q9BWV2 254 aa10.03□□□□□ -0.8
LIG3-207ENST00000586119 TPT1P8Q9HAU6 139 aa10.03□□□□□ -0.8
LIG3-207ENST00000586119 CRLF2Q9HC73 371 aa10.03□□□□□ -0.8
LIG3-207ENST00000586119 MYOZ1Q9NP98 299 aaPredicted RBP10.03□□□□□ -0.8
LIG3-207ENST00000586119 P2RX2Q9UBL9 471 aa10.03□□□□□ -0.8
LIG3-207ENST00000586119 FZR1Q9UM11 496 aa10.03□□□□□ -0.8
LIG3-207ENST00000586119 IGKV1D-42A0A075B6H8 117 aa10.02□□□□□ -0.81
LIG3-207ENST00000586119 MS4A18H0YCH9 400 aa10.02□□□□□ -0.81
LIG3-207ENST00000586119 RPL36A-HNRNPH2H7BZ11 118 aa10.02□□□□□ -0.81
LIG3-207ENST00000586119 M0R082 166 aa10.02□□□□□ -0.81
LIG3-207ENST00000586119 M0R3G1 203 aa10.02□□□□□ -0.81
LIG3-207ENST00000586119 TCF21O43680 179 aa10.02□□□□□ -0.81
LIG3-207ENST00000586119 RGS9O75916 674 aaPredicted RBP10.02□□□□□ -0.81
LIG3-207ENST00000586119 DCTN3O75935 186 aa10.02□□□□□ -0.81
LIG3-207ENST00000586119 VAMP5O95183 116 aa10.02□□□□□ -0.81
LIG3-207ENST00000586119 AHSA1O95433 338 aa10.02□□□□□ -0.81
LIG3-207ENST00000586119 HPRP00739 348 aa10.02□□□□□ -0.81
LIG3-207ENST00000586119 HLA-HP01893 362 aa10.02□□□□□ -0.81
LIG3-207ENST00000586119 IFNGR1P15260 489 aa10.02□□□□□ -0.81
LIG3-207ENST00000586119 ZNF43P17038 809 aa10.02□□□□□ -0.81
LIG3-207ENST00000586119 HTR2AP28223 471 aa10.02□□□□□ -0.81
LIG3-207ENST00000586119 SRP14P37108 136 aaKnown RBP10.02□□□□□ -0.81
LIG3-207ENST00000586119 CAPZA2P47755 286 aa10.02□□□□□ -0.81
LIG3-207ENST00000586119 ANXA11P50995 505 aaKnown RBP10.02□□□□□ -0.81
LIG3-207ENST00000586119 CHN2P52757 468 aa10.02□□□□□ -0.81
LIG3-207ENST00000586119 CDH15P55291 814 aa10.02□□□□□ -0.81
LIG3-207ENST00000586119 DSTNP60981 165 aa10.02□□□□□ -0.81
LIG3-207ENST00000586119 KLF10Q13118 480 aa10.02□□□□□ -0.81
LIG3-207ENST00000586119 SNTB2Q13425 540 aaKnown RBP10.02□□□□□ -0.81
LIG3-207ENST00000586119 MS4A18Q3C1V0 323 aa10.02□□□□□ -0.81
LIG3-207ENST00000586119 C3orf36Q3SXR2 165 aa10.02□□□□□ -0.81
LIG3-207ENST00000586119 C1QTNF12Q5T7M4 302 aa10.02□□□□□ -0.81
LIG3-207ENST00000586119 RNF220Q5VTB9 566 aa10.02□□□□□ -0.81
LIG3-207ENST00000586119 RINLQ6ZS11 566 aa10.02□□□□□ -0.81
LIG3-207ENST00000586119 FUNDC1Q8IVP5 155 aa10.02□□□□□ -0.81
LIG3-207ENST00000586119 CCDC197Q8NCU1 140 aa10.02□□□□□ -0.81
LIG3-207ENST00000586119 ZNF540Q8NDQ6 660 aa10.02□□□□□ -0.81
LIG3-207ENST00000586119 OR9I1Q8NGQ6 314 aa10.02□□□□□ -0.81
LIG3-207ENST00000586119 ZNF417Q8TAU3 575 aa10.02□□□□□ -0.81
LIG3-207ENST00000586119 NEU4Q8WWR8 484 aaPredicted RBP10.02□□□□□ -0.81
LIG3-207ENST00000586119 SPDL1Q96EA4 605 aa10.02□□□□□ -0.81
LIG3-207ENST00000586119 ITCHQ96J02 903 aa10.02□□□□□ -0.81
LIG3-207ENST00000586119 ZNF75AQ96N20 296 aa10.02□□□□□ -0.81
LIG3-207ENST00000586119 OXGR1Q96P68 337 aa10.02□□□□□ -0.81
LIG3-207ENST00000586119 OR2M2Q96R28 347 aa10.02□□□□□ -0.81
LIG3-207ENST00000586119 ZNF587Q96SQ5 575 aaPredicted RBP10.02□□□□□ -0.81
LIG3-207ENST00000586119 WFDC6Q9BQY6 131 aa10.02□□□□□ -0.81
LIG3-207ENST00000586119 MRPL37Q9BZE1 423 aaKnown RBP10.02□□□□□ -0.81
LIG3-207ENST00000586119 NARFLQ9H6Q4 476 aa10.02□□□□□ -0.81
LIG3-207ENST00000586119 ZNF442Q9H7R0 627 aa10.02□□□□□ -0.81
LIG3-207ENST00000586119 LPAR2Q9HBW0 351 aa10.02□□□□□ -0.81
LIG3-207ENST00000586119 B3GNT2Q9NY97 397 aa10.02□□□□□ -0.81
LIG3-207ENST00000586119 CCDC167Q9P0B6 97 aa10.02□□□□□ -0.81
LIG3-207ENST00000586119 MYEF2Q9P2K5 600 aaKnown RBP10.02□□□□□ -0.81
LIG3-207ENST00000586119 FAM157AC9JC47 383 aa10.01□□□□□ -0.81
LIG3-207ENST00000586119 NDUFAB1O14561 156 aa10.01□□□□□ -0.81
LIG3-207ENST00000586119 TPST1O60507 370 aa10.01□□□□□ -0.81
LIG3-207ENST00000586119 SLC43A1O75387 559 aa10.01□□□□□ -0.81
LIG3-207ENST00000586119 HPXP02790 462 aa10.01□□□□□ -0.81
LIG3-207ENST00000586119 PATE4P0C8F1 98 aa10.01□□□□□ -0.81
LIG3-207ENST00000586119 ZCCHC18P0CG32 403 aa10.01□□□□□ -0.81
LIG3-207ENST00000586119 HOXB1P14653 301 aaPredicted RBP10.01□□□□□ -0.81
LIG3-207ENST00000586119 GRPRP30550 384 aa10.01□□□□□ -0.81
LIG3-207ENST00000586119 CRISP3P54108 245 aa10.01□□□□□ -0.81
LIG3-207ENST00000586119 IL1RL1Q01638 556 aa10.01□□□□□ -0.81
LIG3-207ENST00000586119 SF3A3Q12874 501 aaKnown RBP eCLIP10.01□□□□□ -0.81
LIG3-207ENST00000586119 DAG1Q14118 895 aa10.01□□□□□ -0.81
LIG3-207ENST00000586119 MAD2L1BPQ15013 274 aaPredicted RBP10.01□□□□□ -0.81
LIG3-207ENST00000586119 LARS2Q15031 903 aaKnown RBP10.01□□□□□ -0.81
LIG3-207ENST00000586119 COQ5Q5HYK3 327 aa10.01□□□□□ -0.81
LIG3-207ENST00000586119 ZNF311Q5JNZ3 666 aa10.01□□□□□ -0.81
LIG3-207ENST00000586119 ELFN2Q5R3F8 820 aa10.01□□□□□ -0.81
LIG3-207ENST00000586119 NHLRC1Q6VVB1 395 aa10.01□□□□□ -0.81
LIG3-207ENST00000586119 TMEM123Q8N131 208 aa10.01□□□□□ -0.81
LIG3-207ENST00000586119 C10orf111Q8N326 155 aa10.01□□□□□ -0.81
LIG3-207ENST00000586119 GPR137CQ8N3F9 429 aa10.01□□□□□ -0.81
LIG3-207ENST00000586119 RFLNBQ8N5W9 214 aa10.01□□□□□ -0.81
LIG3-207ENST00000586119 FAM169BQ8N8A8 192 aa10.01□□□□□ -0.81
LIG3-207ENST00000586119 FGFBP3Q8TAT2 258 aa10.01□□□□□ -0.81
LIG3-207ENST00000586119 BCAS4Q8TDM0 211 aa10.01□□□□□ -0.81
LIG3-207ENST00000586119 SYT3Q9BQG1 590 aa10.01□□□□□ -0.81
LIG3-207ENST00000586119 MYLK2Q9H1R3 596 aa10.01□□□□□ -0.81
LIG3-207ENST00000586119 OCEL1Q9H607 264 aa10.01□□□□□ -0.81
LIG3-207ENST00000586119 DYNLRB1Q9NP97 96 aa10.01□□□□□ -0.81
LIG3-207ENST00000586119 SLC52A3Q9NQ40 469 aa10.01□□□□□ -0.81
LIG3-207ENST00000586119 LEF1Q9UJU2 399 aaPredicted RBP10.01□□□□□ -0.81
LIG3-207ENST00000586119 ZNF232Q9UNY5 417 aa10.01□□□□□ -0.81
LIG3-207ENST00000586119 CAPN7Q9Y6W3 813 aa10.01□□□□□ -0.81
LIG3-207ENST00000586119 WNK2Q9Y3S1 2297 aa10□□□□□ -0.81
LIG3-207ENST00000586119 A0A0G2JPF8 293 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms