RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 DBTP11182 482 aaKnown RBP4.31□□□□□ -1.72
CDC27-215ENST00000573550 ELAVL4P26378 380 aaKnown RBP4.31□□□□□ -1.72
CDC27-215ENST00000573550 TEAD1P28347 426 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 PPP2R1BP30154 601 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 FGF9P31371 208 aaPredicted RBP4.31□□□□□ -1.72
CDC27-215ENST00000573550 CHI3L1P36222 383 aaPredicted RBP4.31□□□□□ -1.72
CDC27-215ENST00000573550 IFNGR2P38484 337 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 TSFMP43897 325 aaKnown RBP4.31□□□□□ -1.72
CDC27-215ENST00000573550 CAPZA2P47755 286 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 STK19P49842 368 aaPredicted RBP4.31□□□□□ -1.72
CDC27-215ENST00000573550 CAMPP49913 170 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 RORCP51449 518 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 LSM3P62310 102 aaKnown RBP4.31□□□□□ -1.72
CDC27-215ENST00000573550 PSPHP78330 225 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 REEP5Q00765 189 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 IL1RL1Q01638 556 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 BDH1Q02338 343 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 ACSM1Q08AH1 577 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 RAB40BQ12829 278 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 CNTN1Q12860 1018 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 PPP1R8Q12972 351 aaKnown RBP4.31□□□□□ -1.72
CDC27-215ENST00000573550 DDX39BQ13838 428 aaKnown RBP4.31□□□□□ -1.72
CDC27-215ENST00000573550 KIR2DS5Q14953 304 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 SPHARQ15513 63 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 KCNJ8Q15842 424 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 ZNF77Q15935 545 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 SSX1Q16384 188 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 SLC5A12Q1EHB4 618 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 LRRC26Q2I0M4 334 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 DDI2Q5TDH0 399 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 PLPP4Q5VZY2 271 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 TIGD3Q6B0B8 471 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 BHLHB9Q6PI77 547 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 XKRXQ6PP77 449 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 CD200R1LQ6Q8B3 271 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 CCBE1Q6UXH8 406 aaPredicted RBP4.31□□□□□ -1.72
CDC27-215ENST00000573550 CASP12Q6UXS9 341 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 TMIGD1Q6UXZ0 262 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 HSDL2Q6YN16 418 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 TMPRSS11AQ6ZMR5 421 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 GET4Q7L5D6 327 aaPredicted RBP4.31□□□□□ -1.72
CDC27-215ENST00000573550 ADIPOR2Q86V24 386 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 NUDT13Q86X67 352 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 MMAAQ8IVH4 418 aaKnown RBP4.31□□□□□ -1.72
CDC27-215ENST00000573550 UBQLNLQ8IYU4 475 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 CMTM8Q8IZV2 173 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 CYP4Z2PQ8N1L4 340 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 GBGT1Q8N5D6 347 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 TTLQ8NG68 377 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 OR10Q1Q8NGQ4 319 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 OR6F1Q8NGZ6 308 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 RAET1EQ8TD07 263 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 FGF11Q92914 225 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 MAL2Q969L2 176 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 SLC25A46Q96AG3 418 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 RAD51AP1Q96B01 352 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 MED8Q96G25 268 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 TMEM80Q96HE8 168 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 ZNF354BQ96LW1 612 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 PRRC1Q96M27 445 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 NIPSNAP1Q9BPW8 284 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 CHCHD6Q9BRQ6 235 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 CENPOQ9BU64 300 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 RIOK2Q9BVS4 552 aaKnown RBP4.31□□□□□ -1.72
CDC27-215ENST00000573550 RAB11FIP5Q9BXF6 653 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 MS4A8Q9BY19 250 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 POLR2J2Q9GZM3 115 aaKnown RBP4.31□□□□□ -1.72
CDC27-215ENST00000573550 SRRQ9GZT4 340 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 HOXD1Q9GZZ0 328 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 ATG10Q9H0Y0 220 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 POLR2J3Q9H1A7 115 aaKnown RBP4.31□□□□□ -1.72
CDC27-215ENST00000573550 NMNAT1Q9HAN9 279 aaPredicted RBP4.31□□□□□ -1.72
CDC27-215ENST00000573550 FGF20Q9NP95 211 aaPredicted RBP4.31□□□□□ -1.72
CDC27-215ENST00000573550 SPHK2Q9NRA0 654 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 ABCB10Q9NRK6 738 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 MED17Q9NVC6 651 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 MS4A12Q9NXJ0 267 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 RCC2Q9P258 522 aaKnown RBP4.31□□□□□ -1.72
CDC27-215ENST00000573550 P2RX2Q9UBL9 471 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 IL36AQ9UHA7 158 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 ERRFI1Q9UJM3 462 aaPredicted RBP4.31□□□□□ -1.72
CDC27-215ENST00000573550 ZNF221Q9UK13 617 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 RAB23Q9ULC3 237 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 CLEC4EQ9ULY5 219 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 SLC9A8Q9Y2E8 581 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 ASB4Q9Y574 426 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 LRRK1Q38SD2 2015 aa4.31□□□□□ -1.72
CDC27-215ENST00000573550 LOC100506127A0A0U1RQW1 187 aa4.3□□□□□ -1.72
CDC27-215ENST00000573550 A0A1W2PPI3 338 aa4.3□□□□□ -1.72
CDC27-215ENST00000573550 A0A1W2PR77 199 aa4.3□□□□□ -1.72
CDC27-215ENST00000573550 OR2AG2A6NM03 316 aa4.3□□□□□ -1.72
CDC27-215ENST00000573550 FAM25AB3EWG3 89 aa4.3□□□□□ -1.72
CDC27-215ENST00000573550 FAM25CB3EWG5 89 aa4.3□□□□□ -1.72
CDC27-215ENST00000573550 FAM25GB3EWG6 89 aa4.3□□□□□ -1.72
CDC27-215ENST00000573550 C5orf58C9J3I9 102 aa4.3□□□□□ -1.72
CDC27-215ENST00000573550 FFAR1O14842 300 aa4.3□□□□□ -1.72
CDC27-215ENST00000573550 MYL12BO14950 172 aa4.3□□□□□ -1.72
CDC27-215ENST00000573550 CHST10O43529 356 aa4.3□□□□□ -1.72
CDC27-215ENST00000573550 SCO2O43819 266 aa4.3□□□□□ -1.72
CDC27-215ENST00000573550 PTP4A3O75365 173 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms