RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 FOXD4Q12950 439 aaPredicted RBP12.12□□□□□ -0.47
HERPUD1-218ENST00000569569 DEFB113Q30KQ7 82 aa12.12□□□□□ -0.47
HERPUD1-218ENST00000569569 ADAM5Q6NVV9 412 aa12.12□□□□□ -0.47
HERPUD1-218ENST00000569569 KLHL17Q6TDP4 642 aa12.12□□□□□ -0.47
HERPUD1-218ENST00000569569 SPNS3Q6ZMD2 512 aa12.12□□□□□ -0.47
HERPUD1-218ENST00000569569 LINGO2Q7L985 606 aa12.12□□□□□ -0.47
HERPUD1-218ENST00000569569 SLC46A3Q7Z3Q1 461 aa12.12□□□□□ -0.47
HERPUD1-218ENST00000569569 LURAP1LQ8IV03 231 aa12.12□□□□□ -0.47
HERPUD1-218ENST00000569569 DEFB107AQ8IZN7 70 aa12.12□□□□□ -0.47
HERPUD1-218ENST00000569569 GPR137CQ8N3F9 429 aa12.12□□□□□ -0.47
HERPUD1-218ENST00000569569 WDR31Q8NA23 367 aa12.12□□□□□ -0.47
HERPUD1-218ENST00000569569 OR1K1Q8NGR3 316 aa12.12□□□□□ -0.47
HERPUD1-218ENST00000569569 PFN4Q8NHR9 129 aa12.12□□□□□ -0.47
HERPUD1-218ENST00000569569 PIGTQ969N2 578 aa12.12□□□□□ -0.47
HERPUD1-218ENST00000569569 SGTBQ96EQ0 304 aa12.12□□□□□ -0.47
HERPUD1-218ENST00000569569 NSL1Q96IY1 281 aa12.12□□□□□ -0.47
HERPUD1-218ENST00000569569 TXNDC15Q96J42 360 aa12.12□□□□□ -0.47
HERPUD1-218ENST00000569569 LRR1Q96L50 414 aa12.12□□□□□ -0.47
HERPUD1-218ENST00000569569 ALKBH3Q96Q83 286 aaPredicted RBP12.12□□□□□ -0.47
HERPUD1-218ENST00000569569 ALPK1Q96QP1 1244 aa12.12□□□□□ -0.47
HERPUD1-218ENST00000569569 OR2M2Q96R28 347 aa12.12□□□□□ -0.47
HERPUD1-218ENST00000569569 EMC6Q9BV81 110 aa12.12□□□□□ -0.47
HERPUD1-218ENST00000569569 FNDC11Q9BVV2 318 aa12.12□□□□□ -0.47
HERPUD1-218ENST00000569569 CXXC4Q9H2H0 198 aa12.12□□□□□ -0.47
HERPUD1-218ENST00000569569 GORASP2Q9H8Y8 452 aa12.12□□□□□ -0.47
HERPUD1-218ENST00000569569 DCAF13Q9NV06 445 aaKnown RBP12.12□□□□□ -0.47
HERPUD1-218ENST00000569569 MED29Q9NX70 200 aa12.12□□□□□ -0.47
HERPUD1-218ENST00000569569 NPAP1Q9NZP6 1156 aa12.12□□□□□ -0.47
HERPUD1-218ENST00000569569 CD300AQ9UGN4 299 aa12.12□□□□□ -0.47
HERPUD1-218ENST00000569569 SAMD4AQ9UPU9 718 aaKnown RBP12.12□□□□□ -0.47
HERPUD1-218ENST00000569569 MAGED1Q9Y5V3 778 aaPredicted RBP12.12□□□□□ -0.47
HERPUD1-218ENST00000569569 MAP1AP78559 2803 aaPredicted RBP12.12□□□□□ -0.47
HERPUD1-218ENST00000569569 ITPR3Q14573 2671 aa12.11□□□□□ -0.47
HERPUD1-218ENST00000569569 B2RBV5 119 aa12.11□□□□□ -0.47
HERPUD1-218ENST00000569569 BLOC1S5-TXNDC5H3BN57 136 aa12.11□□□□□ -0.47
HERPUD1-218ENST00000569569 J3KTA2 159 aa12.11□□□□□ -0.47
HERPUD1-218ENST00000569569 HS3ST1O14792 307 aa12.11□□□□□ -0.47
HERPUD1-218ENST00000569569 CLOCKO15516 846 aa12.11□□□□□ -0.47
HERPUD1-218ENST00000569569 RNF13O43567 381 aa12.11□□□□□ -0.47
HERPUD1-218ENST00000569569 WNT11O96014 354 aa12.11□□□□□ -0.47
HERPUD1-218ENST00000569569 HOXB1P14653 301 aaPredicted RBP12.11□□□□□ -0.47
HERPUD1-218ENST00000569569 TCN1P20061 433 aaPredicted RBP12.11□□□□□ -0.47
HERPUD1-218ENST00000569569 PAX7P23759 505 aa12.11□□□□□ -0.47
HERPUD1-218ENST00000569569 SH3BGRP55822 239 aaPredicted RBP12.11□□□□□ -0.47
HERPUD1-218ENST00000569569 PRPS1P60891 318 aa12.11□□□□□ -0.47
HERPUD1-218ENST00000569569 ROR2Q01974 943 aaKnown RBP12.11□□□□□ -0.47
HERPUD1-218ENST00000569569 TRAM2Q15035 370 aa12.11□□□□□ -0.47
HERPUD1-218ENST00000569569 FXNQ16595 210 aa12.11□□□□□ -0.47
HERPUD1-218ENST00000569569 SPATS1Q496A3 300 aa12.11□□□□□ -0.47
HERPUD1-218ENST00000569569 KLHL24Q6TFL4 600 aa12.11□□□□□ -0.47
HERPUD1-218ENST00000569569 TMEM108Q6UXF1 575 aa12.11□□□□□ -0.47
HERPUD1-218ENST00000569569 NANOGNBQ7Z5D8 188 aa12.11□□□□□ -0.47
HERPUD1-218ENST00000569569 OFCC1Q8IZS5 231 aa12.11□□□□□ -0.47
HERPUD1-218ENST00000569569 TMEM123Q8N131 208 aa12.11□□□□□ -0.47
HERPUD1-218ENST00000569569 FAM156AQ8NDB6 213 aa12.11□□□□□ -0.47
HERPUD1-218ENST00000569569 LIPHQ8WWY8 451 aa12.11□□□□□ -0.47
HERPUD1-218ENST00000569569 AKAP1Q92667 903 aaKnown RBP eCLIP12.11□□□□□ -0.47
HERPUD1-218ENST00000569569 GPR35Q9HC97 309 aa12.11□□□□□ -0.47
HERPUD1-218ENST00000569569 OBP2BQ9NPH6 170 aa12.11□□□□□ -0.47
HERPUD1-218ENST00000569569 C20orf141Q9NUB4 165 aa12.11□□□□□ -0.47
HERPUD1-218ENST00000569569 BEX4Q9NWD9 120 aaPredicted RBP12.11□□□□□ -0.47
HERPUD1-218ENST00000569569 USF3Q68DE3 2245 aa12.11□□□□□ -0.47
HERPUD1-218ENST00000569569 F8P00451 2351 aa12.11□□□□□ -0.47
HERPUD1-218ENST00000569569 FFAR1O14842 300 aa12.1□□□□□ -0.47
HERPUD1-218ENST00000569569 SERPINI2O75830 405 aa12.1□□□□□ -0.47
HERPUD1-218ENST00000569569 OR7A10O76100 309 aa12.1□□□□□ -0.47
HERPUD1-218ENST00000569569 IFNGR1P15260 489 aa12.1□□□□□ -0.47
HERPUD1-218ENST00000569569 PTAFRP25105 342 aa12.1□□□□□ -0.47
HERPUD1-218ENST00000569569 ZNF83P51522 516 aa12.1□□□□□ -0.47
HERPUD1-218ENST00000569569 BIDP55957 195 aa12.1□□□□□ -0.47
HERPUD1-218ENST00000569569 CAMK2DQ13557 499 aa12.1□□□□□ -0.47
HERPUD1-218ENST00000569569 CEACAM16Q2WEN9 425 aa12.1□□□□□ -0.47
HERPUD1-218ENST00000569569 TBRG1Q3YBR2 411 aa12.1□□□□□ -0.47
HERPUD1-218ENST00000569569 HIKESHIQ53FT3 197 aa12.1□□□□□ -0.47
HERPUD1-218ENST00000569569 CARD17Q5XLA6 110 aa12.1□□□□□ -0.47
HERPUD1-218ENST00000569569 ANKRD16Q6P6B7 361 aa12.1□□□□□ -0.47
HERPUD1-218ENST00000569569 SLC35D2Q76EJ3 337 aa12.1□□□□□ -0.47
HERPUD1-218ENST00000569569 CYP4Z1Q86W10 505 aa12.1□□□□□ -0.47
HERPUD1-218ENST00000569569 C20orf196Q8IYI0 205 aa12.1□□□□□ -0.47
HERPUD1-218ENST00000569569 RNF113BQ8IZP6 322 aaKnown RBP12.1□□□□□ -0.47
HERPUD1-218ENST00000569569 ZNF611Q8N823 705 aa12.1□□□□□ -0.47
HERPUD1-218ENST00000569569 OR6X1Q8NH79 312 aa12.1□□□□□ -0.47
HERPUD1-218ENST00000569569 LILRB1Q8NHL6 650 aaPredicted RBP12.1□□□□□ -0.47
HERPUD1-218ENST00000569569 MAGEE2Q8TD90 523 aaPredicted RBP12.1□□□□□ -0.47
HERPUD1-218ENST00000569569 BCL2L2Q92843 193 aaPredicted RBP12.1□□□□□ -0.47
HERPUD1-218ENST00000569569 RADILQ96JH8 1075 aa12.1□□□□□ -0.47
HERPUD1-218ENST00000569569 ADAD1Q96M93 576 aaKnown RBP12.1□□□□□ -0.47
HERPUD1-218ENST00000569569 CCL19Q99731 98 aa12.1□□□□□ -0.47
HERPUD1-218ENST00000569569 PIP5K1AQ99755 562 aa12.1□□□□□ -0.47
HERPUD1-218ENST00000569569 C1QTNF6Q9BXI9 259 aa12.1□□□□□ -0.47
HERPUD1-218ENST00000569569 CRLF2Q9HC73 371 aa12.1□□□□□ -0.47
HERPUD1-218ENST00000569569 B3GAT2Q9NPZ5 323 aa12.1□□□□□ -0.47
HERPUD1-218ENST00000569569 RHCGQ9UBD6 479 aa12.1□□□□□ -0.47
HERPUD1-218ENST00000569569 MAGEL2Q9UJ55 1249 aa12.1□□□□□ -0.47
HERPUD1-218ENST00000569569 MGAT4BQ9UQ53 548 aa12.1□□□□□ -0.47
HERPUD1-218ENST00000569569 ENPP4Q9Y6X5 453 aa12.1□□□□□ -0.47
HERPUD1-218ENST00000569569 M0R3G1 203 aa12.09□□□□□ -0.47
HERPUD1-218ENST00000569569 ABCD4O14678 606 aa12.09□□□□□ -0.47
HERPUD1-218ENST00000569569 PRSS23O95084 383 aa12.09□□□□□ -0.47
HERPUD1-218ENST00000569569 IFI30P13284 250 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms