RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 VPS37AQ8NEZ2 397 aa10.97□□□□□ -0.65
RNF40-208ENST00000565995 OR51F2Q8NH61 342 aa10.97□□□□□ -0.65
RNF40-208ENST00000565995 RDH5Q92781 318 aa10.97□□□□□ -0.65
RNF40-208ENST00000565995 MRPL24Q96A35 216 aaKnown RBP10.97□□□□□ -0.65
RNF40-208ENST00000565995 TESCQ96BS2 214 aa10.97□□□□□ -0.65
RNF40-208ENST00000565995 LRRC37BQ96QE4 947 aa10.97□□□□□ -0.65
RNF40-208ENST00000565995 ZNF747Q9BV97 191 aa10.97□□□□□ -0.65
RNF40-208ENST00000565995 TAPBPLQ9BX59 468 aa10.97□□□□□ -0.65
RNF40-208ENST00000565995 NOX3Q9HBY0 568 aa10.97□□□□□ -0.65
RNF40-208ENST00000565995 GPR35Q9HC97 309 aa10.97□□□□□ -0.65
RNF40-208ENST00000565995 G6PC2Q9NQR9 355 aa10.97□□□□□ -0.65
RNF40-208ENST00000565995 REV1Q9UBZ9 1251 aa10.97□□□□□ -0.65
RNF40-208ENST00000565995 USP22Q9UPT9 525 aa10.97□□□□□ -0.65
RNF40-208ENST00000565995 LOC102725191A0A1B0GVB3 256 aa10.96□□□□□ -0.65
RNF40-208ENST00000565995 CDHR4A6H8M9 788 aa10.96□□□□□ -0.65
RNF40-208ENST00000565995 WNT9BO14905 357 aa10.96□□□□□ -0.65
RNF40-208ENST00000565995 FRS3O43559 492 aa10.96□□□□□ -0.65
RNF40-208ENST00000565995 PNPP00491 289 aa10.96□□□□□ -0.65
RNF40-208ENST00000565995 AVPP01185 164 aa10.96□□□□□ -0.65
RNF40-208ENST00000565995 HPXP02790 462 aa10.96□□□□□ -0.65
RNF40-208ENST00000565995 CHRM4P08173 479 aa10.96□□□□□ -0.65
RNF40-208ENST00000565995 IL7RP16871 459 aa10.96□□□□□ -0.65
RNF40-208ENST00000565995 EPHA1P21709 976 aa10.96□□□□□ -0.65
RNF40-208ENST00000565995 GLRXP35754 106 aa10.96□□□□□ -0.65
RNF40-208ENST00000565995 HPCAP84074 193 aa10.96□□□□□ -0.65
RNF40-208ENST00000565995 SNTB2Q13425 540 aaKnown RBP10.96□□□□□ -0.65
RNF40-208ENST00000565995 GNA13Q14344 377 aa10.96□□□□□ -0.65
RNF40-208ENST00000565995 TUSC1Q2TAM9 212 aa10.96□□□□□ -0.65
RNF40-208ENST00000565995 PDLIM3Q53GG5 364 aaPredicted RBP10.96□□□□□ -0.65
RNF40-208ENST00000565995 AWAT1Q58HT5 328 aa10.96□□□□□ -0.65
RNF40-208ENST00000565995 MRPL2Q5T653 305 aaKnown RBP10.96□□□□□ -0.65
RNF40-208ENST00000565995 C1orf140Q5VVS0 124 aa10.96□□□□□ -0.65
RNF40-208ENST00000565995 ZNF627Q7L945 461 aa10.96□□□□□ -0.65
RNF40-208ENST00000565995 LSRQ86X29 649 aaPredicted RBP10.96□□□□□ -0.65
RNF40-208ENST00000565995 ANKFN1Q8N957 763 aa10.96□□□□□ -0.65
RNF40-208ENST00000565995 MFSD8Q8NHS3 518 aa10.96□□□□□ -0.65
RNF40-208ENST00000565995 STK35Q8TDR2 534 aa10.96□□□□□ -0.65
RNF40-208ENST00000565995 ZBTB18Q99592 522 aa10.96□□□□□ -0.65
RNF40-208ENST00000565995 MRPL37Q9BZE1 423 aaKnown RBP10.96□□□□□ -0.65
RNF40-208ENST00000565995 DPY30Q9C005 99 aa10.96□□□□□ -0.65
RNF40-208ENST00000565995 ZNF385DQ9H6B1 395 aa10.96□□□□□ -0.65
RNF40-208ENST00000565995 MRGBPQ9NV56 204 aa10.96□□□□□ -0.65
RNF40-208ENST00000565995 ADPRHL2Q9NX46 363 aa10.96□□□□□ -0.65
RNF40-208ENST00000565995 ARMCX1Q9P291 453 aa10.96□□□□□ -0.65
RNF40-208ENST00000565995 CAPN7Q9Y6W3 813 aa10.96□□□□□ -0.65
RNF40-208ENST00000565995 M0R233 179 aa10.95□□□□□ -0.66
RNF40-208ENST00000565995 TMPRSS2O15393 492 aa10.95□□□□□ -0.66
RNF40-208ENST00000565995 RP2O75695 350 aa10.95□□□□□ -0.66
RNF40-208ENST00000565995 CPSF4O95639 269 aaKnown RBP10.95□□□□□ -0.66
RNF40-208ENST00000565995 C1QCP02747 245 aa10.95□□□□□ -0.66
RNF40-208ENST00000565995 SAGP10523 405 aaPredicted RBP10.95□□□□□ -0.66
RNF40-208ENST00000565995 ANPEPP15144 967 aa10.95□□□□□ -0.66
RNF40-208ENST00000565995 MYBPC1Q00872 1141 aa10.95□□□□□ -0.66
RNF40-208ENST00000565995 BNIP2Q12982 314 aa10.95□□□□□ -0.66
RNF40-208ENST00000565995 MAPK11Q15759 364 aa10.95□□□□□ -0.66
RNF40-208ENST00000565995 FXNQ16595 210 aa10.95□□□□□ -0.66
RNF40-208ENST00000565995 DPY19L1Q2PZI1 675 aa10.95□□□□□ -0.66
RNF40-208ENST00000565995 PDCD4Q53EL6 469 aaKnown RBP10.95□□□□□ -0.66
RNF40-208ENST00000565995 PRAMEF8Q5VWM4 474 aa10.95□□□□□ -0.66
RNF40-208ENST00000565995 PRAMEF7Q5VXH5 474 aa10.95□□□□□ -0.66
RNF40-208ENST00000565995 SHQ1Q6PI26 577 aaKnown RBP10.95□□□□□ -0.66
RNF40-208ENST00000565995 C1QL2Q7Z5L3 287 aa10.95□□□□□ -0.66
RNF40-208ENST00000565995 MDP1Q86V88 176 aa10.95□□□□□ -0.66
RNF40-208ENST00000565995 YIPF5Q969M3 257 aa10.95□□□□□ -0.66
RNF40-208ENST00000565995 ZNF837Q96EG3 531 aaPredicted RBP10.95□□□□□ -0.66
RNF40-208ENST00000565995 CCDC115Q96NT0 180 aa10.95□□□□□ -0.66
RNF40-208ENST00000565995 SLC35A5Q9BS91 424 aa10.95□□□□□ -0.66
RNF40-208ENST00000565995 SUCNR1Q9BXA5 334 aa10.95□□□□□ -0.66
RNF40-208ENST00000565995 TPK1Q9H3S4 243 aa10.95□□□□□ -0.66
RNF40-208ENST00000565995 DENND2DQ9H6A0 471 aaPredicted RBP10.95□□□□□ -0.66
RNF40-208ENST00000565995 CRLF2Q9HC73 371 aa10.95□□□□□ -0.66
RNF40-208ENST00000565995 ZNF275Q9NSD4 429 aaPredicted RBP10.95□□□□□ -0.66
RNF40-208ENST00000565995 BTNL2Q9UIR0 455 aa10.95□□□□□ -0.66
RNF40-208ENST00000565995 DSPPQ9NZW4 1301 aa10.94□□□□□ -0.66
RNF40-208ENST00000565995 ZNF99A8MXY4 864 aaPredicted RBP10.94□□□□□ -0.66
RNF40-208ENST00000565995 SLC43A1O75387 559 aa10.94□□□□□ -0.66
RNF40-208ENST00000565995 SLC22A3O75751 556 aa10.94□□□□□ -0.66
RNF40-208ENST00000565995 ZNF14P17017 642 aaPredicted RBP10.94□□□□□ -0.66
RNF40-208ENST00000565995 CHI3L1P36222 383 aaPredicted RBP10.94□□□□□ -0.66
RNF40-208ENST00000565995 ATP4BP51164 291 aa10.94□□□□□ -0.66
RNF40-208ENST00000565995 CLNS1AP54105 237 aaKnown RBP10.94□□□□□ -0.66
RNF40-208ENST00000565995 CLDN17P56750 224 aa10.94□□□□□ -0.66
RNF40-208ENST00000565995 EGR4Q05215 589 aa10.94□□□□□ -0.66
RNF40-208ENST00000565995 CEACAM16Q2WEN9 425 aa10.94□□□□□ -0.66
RNF40-208ENST00000565995 AGKQ53H12 422 aa10.94□□□□□ -0.66
RNF40-208ENST00000565995 KRT80Q6KB66 452 aa10.94□□□□□ -0.66
RNF40-208ENST00000565995 FAHD2BQ6P2I3 314 aaPredicted RBP10.94□□□□□ -0.66
RNF40-208ENST00000565995 ANKRD46Q86W74 232 aa10.94□□□□□ -0.66
RNF40-208ENST00000565995 RNF130Q86XS8 419 aa10.94□□□□□ -0.66
RNF40-208ENST00000565995 TMEM123Q8N131 208 aa10.94□□□□□ -0.66
RNF40-208ENST00000565995 ZDHHC22Q8N966 263 aa10.94□□□□□ -0.66
RNF40-208ENST00000565995 OR9I1Q8NGQ6 314 aa10.94□□□□□ -0.66
RNF40-208ENST00000565995 FAHD2AQ96GK7 314 aa10.94□□□□□ -0.66
RNF40-208ENST00000565995 OXGR1Q96P68 337 aa10.94□□□□□ -0.66
RNF40-208ENST00000565995 PTDSS2Q9BVG9 487 aa10.94□□□□□ -0.66
RNF40-208ENST00000565995 SLC52A3Q9NQ40 469 aa10.94□□□□□ -0.66
RNF40-208ENST00000565995 SAR1AQ9NR31 198 aa10.94□□□□□ -0.66
RNF40-208ENST00000565995 SDR39U1Q9NRG7 319 aaPredicted RBP10.94□□□□□ -0.66
RNF40-208ENST00000565995 RLIMQ9NVW2 624 aa10.94□□□□□ -0.66
RNF40-208ENST00000565995 TREM2Q9NZC2 230 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms