RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 H2AFXP16104 143 aaPredicted RBP4.29□□□□□ -1.72
SCAF11-214ENST00000550893 TBXA2RP21731 343 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 RPS4Y1P22090 263 aaKnown RBP4.29□□□□□ -1.72
SCAF11-214ENST00000550893 ELAVL4P26378 380 aaKnown RBP4.29□□□□□ -1.72
SCAF11-214ENST00000550893 SERPINB5P36952 375 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 CCT5P48643 541 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 CLDN8P56748 225 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 ABCE1P61221 599 aaKnown RBP4.29□□□□□ -1.72
SCAF11-214ENST00000550893 NAA20P61599 178 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 DCAF7P61962 342 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 EMX2Q04743 252 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 FOXF1Q12946 379 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 SKP2Q13309 424 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 GANABQ14697 944 aaKnown RBP4.29□□□□□ -1.72
SCAF11-214ENST00000550893 CASP8Q14790 479 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 LASP1Q14847 261 aaKnown RBP4.29□□□□□ -1.72
SCAF11-214ENST00000550893 KLHL26Q53HC5 615 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 SPANXN4Q5MJ08 99 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 CEP85LQ5SZL2 805 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 LGSNQ5TDP6 509 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 SAXO2Q658L1 398 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 CGB2Q6NT52 195 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 CDC73Q6P1J9 531 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 C8orf82Q6P1X6 216 aaPredicted RBP4.29□□□□□ -1.72
SCAF11-214ENST00000550893 FRRS1Q6ZNA5 592 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 HMGN2P46Q86SG4 172 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 ANKRD46Q86W74 232 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 LACC1Q8IV20 430 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 FUNDC1Q8IVP5 155 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 WDFY1Q8IWB7 410 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 GCNT2Q8N0V5 402 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 CLYBLQ8N0X4 340 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 CLIP4Q8N3C7 705 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 TEX45Q8NA69 505 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 GATSQ8NAP1 163 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 NEXN-AS1Q8NBZ9 246 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 CHDHQ8NE62 594 aaPredicted RBP4.29□□□□□ -1.72
SCAF11-214ENST00000550893 OR8J2Q8NGG1 315 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 OR1J4Q8NGS1 313 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 GOT1L1Q8NHS2 421 aaPredicted RBP4.29□□□□□ -1.72
SCAF11-214ENST00000550893 FNDC9Q8TBE3 224 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 TMEM163Q8TC26 289 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 ZPLD1Q8TCW7 415 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 MIPOL1Q8TD10 442 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 SFXN5Q8TD22 340 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 ABTB1Q969K4 478 aaPredicted RBP4.29□□□□□ -1.72
SCAF11-214ENST00000550893 PPCDCQ96CD2 204 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 STARD4Q96DR4 205 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 MTERF3Q96E29 417 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 PPP1R36Q96LQ0 422 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 JSRP1Q96MG2 331 aaPredicted RBP4.29□□□□□ -1.72
SCAF11-214ENST00000550893 BBS4Q96RK4 519 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 NUF2Q9BZD4 464 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 ZNF350Q9GZX5 532 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 STMN4Q9H169 189 aaPredicted RBP4.29□□□□□ -1.72
SCAF11-214ENST00000550893 CXXC4Q9H2H0 198 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 IKZF5Q9H5V7 419 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 WDR55Q9H6Y2 383 aaPredicted RBP4.29□□□□□ -1.72
SCAF11-214ENST00000550893 METTL7AQ9H8H3 244 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 PLEKHF2Q9H8W4 249 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 RNF122Q9H9V4 155 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 MCCC2Q9HCC0 563 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 SLCO1B3Q9NPD5 702 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 DDX18Q9NVP1 670 aaKnown RBP4.29□□□□□ -1.72
SCAF11-214ENST00000550893 AIG1Q9NVV5 245 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 ZNF446Q9NWS9 450 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 IL36RNQ9UBH0 155 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 PRODH2Q9UF12 536 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 DHDHQ9UQ10 334 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 RPH3AQ9Y2J0 694 aaPredicted RBP4.29□□□□□ -1.72
SCAF11-214ENST00000550893 WBP11Q9Y2W2 641 aaKnown RBP4.29□□□□□ -1.72
SCAF11-214ENST00000550893 TMED5Q9Y3A6 229 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 ZNF337Q9Y3M9 751 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 ZNF780BQ9Y6R6 833 aa4.29□□□□□ -1.72
SCAF11-214ENST00000550893 A0A1W2PQD3 144 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 A0A1W2PRB8 838 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 IFITM10A6NMD0 228 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 TMEM114B3SHH9 223 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 HMGN4O00479 90 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 TP53I11O14683 189 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 TM9SF1O15321 606 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 EMC8O43402 210 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 RAMP1O60894 148 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 GUCY1B2O75343 617 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 GCM2O75603 506 aaPredicted RBP4.28□□□□□ -1.72
SCAF11-214ENST00000550893 REM1O75628 298 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 UGT2B17O75795 530 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 RCBTB2O95199 551 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 PPP1R3DO95685 299 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 ACTL6AO96019 429 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 CHRM4P08173 479 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 PRPS2P11908 318 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 CHMP24386 653 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 DPP4P27487 766 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 NTSP30990 170 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 GABRA3P34903 492 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 MPIP34949 423 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 MTNR1AP48039 350 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 SLC1A6P48664 564 aa4.28□□□□□ -1.72
SCAF11-214ENST00000550893 AMTP48728 403 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms