RNA–Protein interactions for RNA: ENST00000520002.5

CSMD1-206, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-206ENST00000520002 MYO7BQ6PIF6 2116 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.09□□□□□ -1.11
CSMD1-206ENST00000520002 HLA-HP01893 362 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 SERPINE2P07093 398 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 SFTA3P0C7M3 94 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 ACHEP22303 614 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 SHC1P29353 583 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 GRB2P62993 217 aaKnown RBP8.09□□□□□ -1.11
CSMD1-206ENST00000520002 ZNF74Q16587 644 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 KIAA0895LQ68EN5 471 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 ZNF610Q8N9Z0 462 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 SUMF1Q8NBK3 374 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 TBC1D20Q96BZ9 403 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 TPPP3Q9BW30 176 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 PCDHA9Q9Y5H5 950 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 NPIPB15A6NHN6 443 aaPredicted RBP8.09□□□□□ -1.11
CSMD1-206ENST00000520002 ACOD1A6NK06 481 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 TMEM127O75204 238 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 APBB3O95704 486 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 MMP7P09237 267 aaPredicted RBP8.09□□□□□ -1.11
CSMD1-206ENST00000520002 BMP1P13497 986 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 FABP9Q0Z7S8 132 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 TAF9Q16594 264 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 OR9K2Q8NGE7 335 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 CLCF1Q9UBD9 225 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 BTNL2Q9UIR0 455 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 TOPAZ1Q8N9V7 1692 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 A0A1W2PPH5 198 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 OR6C68A6NDL8 312 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 TOX4O94842 621 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 HNRNPA2B1P22626 353 aaKnown RBP8.09□□□□□ -1.11
CSMD1-206ENST00000520002 RPL29P47914 159 aaKnown RBP8.09□□□□□ -1.11
CSMD1-206ENST00000520002 GRM7Q14831 915 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 TBPL2Q6SJ96 375 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 UNC5DQ6UXZ4 953 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 SHISA6Q6ZSJ9 500 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 PNPLA1Q8N8W4 532 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 C22orf15Q8WYQ4 148 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 LRFN5Q96NI6 719 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 HIDE1A8MVS5 230 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 C17orf105B2RV13 164 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 PODNL1Q6PEZ8 512 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 SERINC5Q86VE9 423 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 TAF9BQ9HBM6 251 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 ANKRD31Q8N7Z5 1873 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 NPIPA5A0A0B4J1W7 369 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 NDUFB2O95178 105 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 ALDOCP09972 364 aaKnown RBP8.09□□□□□ -1.11
CSMD1-206ENST00000520002 RTP2Q5QGT7 225 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 BMFQ96LC9 184 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 C20orf27Q9GZN8 174 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 TP53TG5Q9Y2B4 290 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 A0A1W2PPV4 95 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 TGM5O43548 720 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 CASP6P55212 293 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 TLE4Q04727 773 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 CDS1Q92903 461 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 ALOXE3Q9BYJ1 711 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 EXOSC3Q9NQT5 275 aaKnown RBP8.09□□□□□ -1.11
CSMD1-206ENST00000520002 VDAC3Q9Y277 283 aa8.09□□□□□ -1.11
CSMD1-206ENST00000520002 TDRD15B5MCY1 1934 aaKnown RBP8.09□□□□□ -1.12
CSMD1-206ENST00000520002 RNASET2O00584 256 aaKnown RBP8.08□□□□□ -1.12
CSMD1-206ENST00000520002 GIPP09681 153 aaPredicted RBP8.08□□□□□ -1.12
CSMD1-206ENST00000520002 PCP4P48539 62 aa8.08□□□□□ -1.12
CSMD1-206ENST00000520002 EXOSC7Q15024 291 aaKnown RBP8.08□□□□□ -1.12
CSMD1-206ENST00000520002 NEIL2Q969S2 332 aa8.08□□□□□ -1.12
CSMD1-206ENST00000520002 VAMP8Q9BV40 100 aa8.08□□□□□ -1.12
CSMD1-206ENST00000520002 HIPK2Q9H2X6 1198 aa8.08□□□□□ -1.12
CSMD1-206ENST00000520002 HHATLQ9HCP6 504 aa8.08□□□□□ -1.12
CSMD1-206ENST00000520002 MTCH1Q9NZJ7 389 aa8.08□□□□□ -1.12
CSMD1-206ENST00000520002 PIAS3Q9Y6X2 628 aa8.08□□□□□ -1.12
CSMD1-206ENST00000520002 GPR37L1O60883 481 aa8.08□□□□□ -1.12
CSMD1-206ENST00000520002 PRDX3P30048 256 aaKnown RBP8.08□□□□□ -1.12
CSMD1-206ENST00000520002 DSC1Q08554 894 aa8.08□□□□□ -1.12
CSMD1-206ENST00000520002 ETV3LQ6ZN32 361 aa8.08□□□□□ -1.12
CSMD1-206ENST00000520002 SDR9C7Q8NEX9 313 aa8.08□□□□□ -1.12
CSMD1-206ENST00000520002 TMEM163Q8TC26 289 aa8.08□□□□□ -1.12
CSMD1-206ENST00000520002 EXTL1Q92935 676 aa8.08□□□□□ -1.12
CSMD1-206ENST00000520002 TVP23CQ96ET8 276 aa8.08□□□□□ -1.12
CSMD1-206ENST00000520002 MACROD1Q9BQ69 325 aa8.08□□□□□ -1.12
CSMD1-206ENST00000520002 DHRS4Q9BTZ2 278 aa8.08□□□□□ -1.12
CSMD1-206ENST00000520002 MIOXQ9UGB7 285 aa8.08□□□□□ -1.12
CSMD1-206ENST00000520002 FLVCR2Q9UPI3 526 aa8.08□□□□□ -1.12
CSMD1-206ENST00000520002 DOK2O60496 412 aa8.08□□□□□ -1.12
CSMD1-206ENST00000520002 TAS2R30P59541 319 aa8.08□□□□□ -1.12
CSMD1-206ENST00000520002 CXCR4P61073 352 aa8.08□□□□□ -1.12
CSMD1-206ENST00000520002 LRRC56Q8IYG6 542 aaPredicted RBP8.08□□□□□ -1.12
CSMD1-206ENST00000520002 IL1F10Q8WWZ1 152 aa8.08□□□□□ -1.12
CSMD1-206ENST00000520002 LINC00052Q96N35 136 aa8.08□□□□□ -1.12
CSMD1-206ENST00000520002 HAPLN2Q9GZV7 340 aa8.08□□□□□ -1.12
CSMD1-206ENST00000520002 IL17BQ9UHF5 180 aa8.08□□□□□ -1.12
CSMD1-206ENST00000520002 MYO16Q9Y6X6 1858 aa8.08□□□□□ -1.12
CSMD1-206ENST00000520002 FZD9O00144 591 aa8.08□□□□□ -1.12
CSMD1-206ENST00000520002 DPM1O60762 260 aa8.08□□□□□ -1.12
CSMD1-206ENST00000520002 ACP2P11117 423 aa8.08□□□□□ -1.12
CSMD1-206ENST00000520002 NPY4RP50391 375 aa8.08□□□□□ -1.12
CSMD1-206ENST00000520002 TMEM71Q6P5X7 295 aa8.08□□□□□ -1.12
CSMD1-206ENST00000520002 PLXDC1Q8IUK5 500 aa8.08□□□□□ -1.12
CSMD1-206ENST00000520002 ZNF383Q8NA42 475 aa8.08□□□□□ -1.12
CSMD1-206ENST00000520002 GPR148Q8TDV2 347 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms