RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 CCL4L1Q8NHW4 92 aa12.13□□□□□ -0.47
TCOF1-213ENST00000514442 BMFQ96LC9 184 aa12.13□□□□□ -0.47
TCOF1-213ENST00000514442 SLC6A7Q99884 636 aa12.13□□□□□ -0.47
TCOF1-213ENST00000514442 SLC19A3Q9BZV2 496 aa12.13□□□□□ -0.47
TCOF1-213ENST00000514442 BRWD3Q6RI45 1802 aa12.13□□□□□ -0.47
TCOF1-213ENST00000514442 SCN1AP35498 2009 aa12.13□□□□□ -0.47
TCOF1-213ENST00000514442 RPS10-NUDT3A0A1W2PQS6 291 aa12.13□□□□□ -0.47
TCOF1-213ENST00000514442 EFCAB7A8K855 629 aa12.13□□□□□ -0.47
TCOF1-213ENST00000514442 SRPX2O60687 465 aaPredicted RBP12.13□□□□□ -0.47
TCOF1-213ENST00000514442 PEX11BO96011 259 aa12.13□□□□□ -0.47
TCOF1-213ENST00000514442 RAD52P43351 418 aa12.13□□□□□ -0.47
TCOF1-213ENST00000514442 RPS10P46783 165 aaKnown RBP12.13□□□□□ -0.47
TCOF1-213ENST00000514442 PRPS1P60891 318 aa12.13□□□□□ -0.47
TCOF1-213ENST00000514442 CBFBQ13951 182 aa12.13□□□□□ -0.47
TCOF1-213ENST00000514442 PGGHGQ32M88 737 aa12.13□□□□□ -0.47
TCOF1-213ENST00000514442 FAM209BQ5JX69 171 aa12.13□□□□□ -0.47
TCOF1-213ENST00000514442 ABHD17BQ5VST6 288 aa12.13□□□□□ -0.47
TCOF1-213ENST00000514442 OR10K2Q6IF99 312 aa12.13□□□□□ -0.47
TCOF1-213ENST00000514442 SLC18B1Q6NT16 456 aa12.13□□□□□ -0.47
TCOF1-213ENST00000514442 MEPCEQ7L2J0 689 aaKnown RBP12.13□□□□□ -0.47
TCOF1-213ENST00000514442 GPR137CQ8N3F9 429 aa12.13□□□□□ -0.47
TCOF1-213ENST00000514442 ABHD4Q8TB40 342 aa12.13□□□□□ -0.47
TCOF1-213ENST00000514442 MS4A7Q9GZW8 240 aaPredicted RBP12.13□□□□□ -0.47
TCOF1-213ENST00000514442 PISDQ9UG56 409 aa12.13□□□□□ -0.47
TCOF1-213ENST00000514442 LRIT2A6NDA9 550 aa12.13□□□□□ -0.47
TCOF1-213ENST00000514442 SCRG1O75711 98 aa12.13□□□□□ -0.47
TCOF1-213ENST00000514442 ATP1B1P05026 303 aa12.13□□□□□ -0.47
TCOF1-213ENST00000514442 PNMTP11086 282 aa12.13□□□□□ -0.47
TCOF1-213ENST00000514442 PSMB10P40306 273 aa12.13□□□□□ -0.47
TCOF1-213ENST00000514442 AFF3P51826 1226 aaKnown RBP12.13□□□□□ -0.47
TCOF1-213ENST00000514442 SNU13P55769 128 aaKnown RBP12.13□□□□□ -0.47
TCOF1-213ENST00000514442 SQSTM1Q13501 440 aa12.13□□□□□ -0.47
TCOF1-213ENST00000514442 TPBGQ13641 420 aa12.13□□□□□ -0.47
TCOF1-213ENST00000514442 EIF2S3LQ2VIR3 472 aaKnown RBP12.13□□□□□ -0.47
TCOF1-213ENST00000514442 ABHD17CQ6PCB6 329 aa12.13□□□□□ -0.47
TCOF1-213ENST00000514442 BVESQ8NE79 360 aa12.13□□□□□ -0.47
TCOF1-213ENST00000514442 TERB2Q8NHR7 220 aa12.13□□□□□ -0.47
TCOF1-213ENST00000514442 FOXRED1Q96CU9 486 aaPredicted RBP12.13□□□□□ -0.47
TCOF1-213ENST00000514442 CXorf58Q96LI9 332 aa12.13□□□□□ -0.47
TCOF1-213ENST00000514442 AMDHD1Q96NU7 426 aa12.13□□□□□ -0.47
TCOF1-213ENST00000514442 ZNF251Q9BRH9 671 aa12.13□□□□□ -0.47
TCOF1-213ENST00000514442 PRR14Q9BWN1 585 aa12.13□□□□□ -0.47
TCOF1-213ENST00000514442 FBXO45P0C2W1 286 aa12.12□□□□□ -0.47
TCOF1-213ENST00000514442 AKR1C4P17516 323 aa12.12□□□□□ -0.47
TCOF1-213ENST00000514442 CAMLGP49069 296 aa12.12□□□□□ -0.47
TCOF1-213ENST00000514442 DNAAF1Q8NEP3 725 aa12.12□□□□□ -0.47
TCOF1-213ENST00000514442 ZBTB8AQ96BR9 441 aa12.12□□□□□ -0.47
TCOF1-213ENST00000514442 VN1R3Q9BXE9 311 aa12.12□□□□□ -0.47
TCOF1-213ENST00000514442 SLC25A18Q9H1K4 315 aa12.12□□□□□ -0.47
TCOF1-213ENST00000514442 C2orf42Q9NWW7 574 aa12.12□□□□□ -0.47
TCOF1-213ENST00000514442 POLR2AP24928 1970 aaKnown RBP12.12□□□□□ -0.47
TCOF1-213ENST00000514442 GFYI3L273 518 aa12.12□□□□□ -0.47
TCOF1-213ENST00000514442 YY2O15391 372 aa12.12□□□□□ -0.47
TCOF1-213ENST00000514442 RD3LP0DJH9 198 aa12.12□□□□□ -0.47
TCOF1-213ENST00000514442 LSSP48449 732 aa12.12□□□□□ -0.47
TCOF1-213ENST00000514442 AKR1C2P52895 323 aa12.12□□□□□ -0.47
TCOF1-213ENST00000514442 B2MP61769 119 aa12.12□□□□□ -0.47
TCOF1-213ENST00000514442 AKR1C1Q04828 323 aa12.12□□□□□ -0.47
TCOF1-213ENST00000514442 ZNF585AQ6P3V2 769 aa12.12□□□□□ -0.47
TCOF1-213ENST00000514442 FCRLAQ7L513 359 aa12.12□□□□□ -0.47
TCOF1-213ENST00000514442 PRSS45Q7RTY3 260 aa12.12□□□□□ -0.47
TCOF1-213ENST00000514442 PXKQ7Z7A4 578 aa12.12□□□□□ -0.47
TCOF1-213ENST00000514442 RBM24Q9BX46 236 aaKnown RBP12.12□□□□□ -0.47
TCOF1-213ENST00000514442 MED17Q9NVC6 651 aa12.12□□□□□ -0.47
TCOF1-213ENST00000514442 PLEKHB1Q9UF11 243 aaPredicted RBP12.12□□□□□ -0.47
TCOF1-213ENST00000514442 V9GY05 133 aa12.12□□□□□ -0.47
TCOF1-213ENST00000514442 SHROOM3Q8TF72 1996 aa12.12□□□□□ -0.47
TCOF1-213ENST00000514442 SOD1P00441 154 aa12.12□□□□□ -0.47
TCOF1-213ENST00000514442 SPI1P17947 270 aa12.12□□□□□ -0.47
TCOF1-213ENST00000514442 Q3ZCU0 254 aa12.12□□□□□ -0.47
TCOF1-213ENST00000514442 GLYR1Q49A26 553 aaPredicted RBP12.12□□□□□ -0.47
TCOF1-213ENST00000514442 NAXDQ8IW45 347 aa12.12□□□□□ -0.47
TCOF1-213ENST00000514442 SKA3Q8IX90 412 aa12.12□□□□□ -0.47
TCOF1-213ENST00000514442 OR6C1Q96RD1 312 aa12.12□□□□□ -0.47
TCOF1-213ENST00000514442 SLC35A3Q9Y2D2 325 aa12.12□□□□□ -0.47
TCOF1-213ENST00000514442 FZD6O60353 706 aa12.12□□□□□ -0.47
TCOF1-213ENST00000514442 DPM1O60762 260 aa12.12□□□□□ -0.47
TCOF1-213ENST00000514442 SLC6A8P48029 635 aa12.12□□□□□ -0.47
TCOF1-213ENST00000514442 OR1D5P58170 312 aa12.12□□□□□ -0.47
TCOF1-213ENST00000514442 SHEQ5VZ18 495 aa12.12□□□□□ -0.47
TCOF1-213ENST00000514442 FAM71E1Q6IPT2 247 aa12.12□□□□□ -0.47
TCOF1-213ENST00000514442 UQCC3Q6UW78 93 aa12.12□□□□□ -0.47
TCOF1-213ENST00000514442 LINC00469Q8N7U9 141 aa12.12□□□□□ -0.47
TCOF1-213ENST00000514442 OR14K1Q8NGZ2 314 aa12.12□□□□□ -0.47
TCOF1-213ENST00000514442 RSC1A1Q92681 617 aa12.12□□□□□ -0.47
TCOF1-213ENST00000514442 SLC23A2Q9UGH3 650 aa12.12□□□□□ -0.47
TCOF1-213ENST00000514442 MMP17Q9ULZ9 603 aa12.12□□□□□ -0.47
TCOF1-213ENST00000514442 FLVCR2Q9UPI3 526 aa12.12□□□□□ -0.47
TCOF1-213ENST00000514442 ZNF593O00488 134 aaPredicted RBP12.11□□□□□ -0.47
TCOF1-213ENST00000514442 ZNF254O75437 659 aa12.11□□□□□ -0.47
TCOF1-213ENST00000514442 SCGNO76038 276 aa12.11□□□□□ -0.47
TCOF1-213ENST00000514442 CER1O95813 267 aa12.11□□□□□ -0.47
TCOF1-213ENST00000514442 MAGEB1P43366 347 aa12.11□□□□□ -0.47
TCOF1-213ENST00000514442 POU3F4P49335 361 aa12.11□□□□□ -0.47
TCOF1-213ENST00000514442 GAB1Q13480 694 aa12.11□□□□□ -0.47
TCOF1-213ENST00000514442 ST3GAL2Q16842 350 aa12.11□□□□□ -0.47
TCOF1-213ENST00000514442 PTOV1Q86YD1 416 aa12.11□□□□□ -0.47
TCOF1-213ENST00000514442 BPIFCQ8NFQ6 507 aa12.11□□□□□ -0.47
TCOF1-213ENST00000514442 OR13C2Q8NGS9 318 aa12.11□□□□□ -0.47
TCOF1-213ENST00000514442 NAT6Q93015 286 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms