RNA–Protein interactions for RNA: ENST00000493648.1

TOP3A-207, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 503 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-207ENST00000493648 HS3ST1O14792 307 aa6.12□□□□□ -1.43
TOP3A-207ENST00000493648 ARHGEF9O43307 516 aa6.12□□□□□ -1.43
TOP3A-207ENST00000493648 RNF13O43567 381 aa6.12□□□□□ -1.43
TOP3A-207ENST00000493648 TRAF3IP2O43734 574 aaPredicted RBP6.12□□□□□ -1.43
TOP3A-207ENST00000493648 SMPD2O60906 423 aa6.12□□□□□ -1.43
TOP3A-207ENST00000493648 TMCC2O75069 709 aa6.12□□□□□ -1.43
TOP3A-207ENST00000493648 SERPINI2O75830 405 aa6.12□□□□□ -1.43
TOP3A-207ENST00000493648 ZNF432O94892 652 aa6.12□□□□□ -1.43
TOP3A-207ENST00000493648 HPRP00739 348 aa6.12□□□□□ -1.43
TOP3A-207ENST00000493648 HLA-DOBP13765 273 aa6.12□□□□□ -1.43
TOP3A-207ENST00000493648 NCK1P16333 377 aa6.12□□□□□ -1.43
TOP3A-207ENST00000493648 PTAFRP25105 342 aa6.12□□□□□ -1.43
TOP3A-207ENST00000493648 YAP1P46937 504 aaKnown RBP6.12□□□□□ -1.43
TOP3A-207ENST00000493648 ZNF83P51522 516 aa6.12□□□□□ -1.43
TOP3A-207ENST00000493648 BIDP55957 195 aa6.12□□□□□ -1.43
TOP3A-207ENST00000493648 UBE2NP61088 152 aaKnown RBP6.12□□□□□ -1.43
TOP3A-207ENST00000493648 ARF1P84077 181 aaKnown RBP6.12□□□□□ -1.43
TOP3A-207ENST00000493648 KRT72Q14CN4 511 aa6.12□□□□□ -1.43
TOP3A-207ENST00000493648 TRAM2Q15035 370 aa6.12□□□□□ -1.43
TOP3A-207ENST00000493648 SPATS1Q496A3 300 aa6.12□□□□□ -1.43
TOP3A-207ENST00000493648 SAMD4BQ5PRF9 694 aaKnown RBP6.12□□□□□ -1.43
TOP3A-207ENST00000493648 PRR14LQ5THK1 2151 aa6.12□□□□□ -1.43
TOP3A-207ENST00000493648 CARD17Q5XLA6 110 aa6.12□□□□□ -1.43
TOP3A-207ENST00000493648 ANKRD16Q6P6B7 361 aa6.12□□□□□ -1.43
TOP3A-207ENST00000493648 RRM2BQ7LG56 351 aa6.12□□□□□ -1.43
TOP3A-207ENST00000493648 NANOGNBQ7Z5D8 188 aa6.12□□□□□ -1.43
TOP3A-207ENST00000493648 VTCN1Q7Z7D3 282 aa6.12□□□□□ -1.43
TOP3A-207ENST00000493648 TSPYL5Q86VY4 417 aaPredicted RBP6.12□□□□□ -1.43
TOP3A-207ENST00000493648 C20orf196Q8IYI0 205 aa6.12□□□□□ -1.43
TOP3A-207ENST00000493648 CDK20Q8IZL9 346 aa6.12□□□□□ -1.43
TOP3A-207ENST00000493648 RNF113BQ8IZP6 322 aaKnown RBP6.12□□□□□ -1.43
TOP3A-207ENST00000493648 PGAM4Q8N0Y7 254 aa6.12□□□□□ -1.43
TOP3A-207ENST00000493648 LRRC17Q8N6Y2 441 aa6.12□□□□□ -1.43
TOP3A-207ENST00000493648 WDR31Q8NA23 367 aa6.12□□□□□ -1.43
TOP3A-207ENST00000493648 CCDC197Q8NCU1 140 aa6.12□□□□□ -1.43
TOP3A-207ENST00000493648 OR1K1Q8NGR3 316 aa6.12□□□□□ -1.43
TOP3A-207ENST00000493648 OR6N1Q8NGY5 312 aa6.12□□□□□ -1.43
TOP3A-207ENST00000493648 OR6X1Q8NH79 312 aa6.12□□□□□ -1.43
TOP3A-207ENST00000493648 MAGEE2Q8TD90 523 aaPredicted RBP6.12□□□□□ -1.43
TOP3A-207ENST00000493648 TMEM255BQ8WV15 326 aa6.12□□□□□ -1.43
TOP3A-207ENST00000493648 TMEM171Q8WVE6 324 aa6.12□□□□□ -1.43
TOP3A-207ENST00000493648 BCL2L2Q92843 193 aaPredicted RBP6.12□□□□□ -1.43
TOP3A-207ENST00000493648 FBXW5Q969U6 566 aa6.12□□□□□ -1.43
TOP3A-207ENST00000493648 TXNDC15Q96J42 360 aa6.12□□□□□ -1.43
TOP3A-207ENST00000493648 HSH2DQ96JZ2 352 aa6.12□□□□□ -1.43
TOP3A-207ENST00000493648 ALKBH3Q96Q83 286 aaPredicted RBP6.12□□□□□ -1.43
TOP3A-207ENST00000493648 OR2M2Q96R28 347 aa6.12□□□□□ -1.43
TOP3A-207ENST00000493648 CDRT15Q96T59 188 aa6.12□□□□□ -1.43
TOP3A-207ENST00000493648 EMC6Q9BV81 110 aa6.12□□□□□ -1.43
TOP3A-207ENST00000493648 HEATR1Q9H583 2144 aaKnown RBP6.12□□□□□ -1.43
TOP3A-207ENST00000493648 GORASP2Q9H8Y8 452 aa6.12□□□□□ -1.43
TOP3A-207ENST00000493648 CRLF2Q9HC73 371 aa6.12□□□□□ -1.43
TOP3A-207ENST00000493648 GPR35Q9HC97 309 aa6.12□□□□□ -1.43
TOP3A-207ENST00000493648 MOV10Q9HCE1 1003 aaKnown RBP6.12□□□□□ -1.43
TOP3A-207ENST00000493648 MEPEQ9NQ76 525 aaPredicted RBP6.12□□□□□ -1.43
TOP3A-207ENST00000493648 ARL8BQ9NVJ2 186 aa6.12□□□□□ -1.43
TOP3A-207ENST00000493648 FAIMQ9NVQ4 179 aa6.12□□□□□ -1.43
TOP3A-207ENST00000493648 GMPR2Q9P2T1 348 aaKnown RBP6.12□□□□□ -1.43
TOP3A-207ENST00000493648 EGFL7Q9UHF1 273 aa6.12□□□□□ -1.43
TOP3A-207ENST00000493648 POU2F3Q9UKI9 436 aa6.12□□□□□ -1.43
TOP3A-207ENST00000493648 ADAM21Q9UKJ8 722 aa6.12□□□□□ -1.43
TOP3A-207ENST00000493648 A4GNTQ9UNA3 340 aa6.12□□□□□ -1.43
TOP3A-207ENST00000493648 SAMD4AQ9UPU9 718 aaKnown RBP6.12□□□□□ -1.43
TOP3A-207ENST00000493648 FAM32AQ9Y421 112 aaKnown RBP6.12□□□□□ -1.43
TOP3A-207ENST00000493648 POLQO75417 2590 aa6.12□□□□□ -1.43
TOP3A-207ENST00000493648 AKAP6Q13023 2319 aa6.11□□□□□ -1.43
TOP3A-207ENST00000493648 A0A1W2PRG6 482 aa6.11□□□□□ -1.43
TOP3A-207ENST00000493648 ZNF99A8MXY4 864 aaPredicted RBP6.11□□□□□ -1.43
TOP3A-207ENST00000493648 B2RBV5 119 aa6.11□□□□□ -1.43
TOP3A-207ENST00000493648 OR7A10O76100 309 aa6.11□□□□□ -1.43
TOP3A-207ENST00000493648 BCL10O95999 233 aa6.11□□□□□ -1.43
TOP3A-207ENST00000493648 ASAH2BP0C7U1 165 aa6.11□□□□□ -1.43
TOP3A-207ENST00000493648 IFI30P13284 250 aa6.11□□□□□ -1.43
TOP3A-207ENST00000493648 HSD17B1P14061 328 aa6.11□□□□□ -1.43
TOP3A-207ENST00000493648 IFNGR1P15260 489 aa6.11□□□□□ -1.43
TOP3A-207ENST00000493648 TCN1P20061 433 aaPredicted RBP6.11□□□□□ -1.43
TOP3A-207ENST00000493648 CD40P25942 277 aa6.11□□□□□ -1.43
TOP3A-207ENST00000493648 CSNK1A1P48729 337 aa6.11□□□□□ -1.43
TOP3A-207ENST00000493648 UGT2B15P54855 530 aa6.11□□□□□ -1.43
TOP3A-207ENST00000493648 RPS4XP62701 263 aaKnown RBP6.11□□□□□ -1.43
TOP3A-207ENST00000493648 NKX6-1P78426 367 aaPredicted RBP6.11□□□□□ -1.43
TOP3A-207ENST00000493648 SLC25A3Q00325 362 aa6.11□□□□□ -1.43
TOP3A-207ENST00000493648 LGALS3BPQ08380 585 aa6.11□□□□□ -1.43
TOP3A-207ENST00000493648 CAMK2DQ13557 499 aa6.11□□□□□ -1.43
TOP3A-207ENST00000493648 CEACAM16Q2WEN9 425 aa6.11□□□□□ -1.43
TOP3A-207ENST00000493648 TBRG1Q3YBR2 411 aa6.11□□□□□ -1.43
TOP3A-207ENST00000493648 ZNF672Q499Z4 452 aaPredicted RBP6.11□□□□□ -1.43
TOP3A-207ENST00000493648 HIKESHIQ53FT3 197 aa6.11□□□□□ -1.43
TOP3A-207ENST00000493648 SHEQ5VZ18 495 aa6.11□□□□□ -1.43
TOP3A-207ENST00000493648 SLC22A25Q6T423 547 aa6.11□□□□□ -1.43
TOP3A-207ENST00000493648 SEZ6L2Q6UXD5 910 aa6.11□□□□□ -1.43
TOP3A-207ENST00000493648 NHLRC1Q6VVB1 395 aa6.11□□□□□ -1.43
TOP3A-207ENST00000493648 ZNF730Q6ZMV8 503 aa6.11□□□□□ -1.43
TOP3A-207ENST00000493648 SLC35D2Q76EJ3 337 aa6.11□□□□□ -1.43
TOP3A-207ENST00000493648 LINGO2Q7L985 606 aa6.11□□□□□ -1.43
TOP3A-207ENST00000493648 SLC46A3Q7Z3Q1 461 aa6.11□□□□□ -1.43
TOP3A-207ENST00000493648 TGIF2LYQ8IUE0 185 aa6.11□□□□□ -1.43
TOP3A-207ENST00000493648 CCDC36Q8IYA8 594 aa6.11□□□□□ -1.43
TOP3A-207ENST00000493648 DEFB107AQ8IZN7 70 aa6.11□□□□□ -1.43
TOP3A-207ENST00000493648 OFCC1Q8IZS5 231 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms