RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 SLC17A5Q9NRA2 495 aa11.75□□□□□ -0.53
CCL28-202ENST00000489442 BEX4Q9NWD9 120 aaPredicted RBP11.75□□□□□ -0.53
CCL28-202ENST00000489442 MED29Q9NX70 200 aa11.75□□□□□ -0.53
CCL28-202ENST00000489442 MED31Q9Y3C7 131 aa11.75□□□□□ -0.53
CCL28-202ENST00000489442 MAGED1Q9Y5V3 778 aaPredicted RBP11.75□□□□□ -0.53
CCL28-202ENST00000489442 SLC25A15Q9Y619 301 aa11.75□□□□□ -0.53
CCL28-202ENST00000489442 FLNAP21333 2647 aaKnown RBP11.75□□□□□ -0.53
CCL28-202ENST00000489442 RAI1Q7Z5J4 1906 aaPredicted RBP11.74□□□□□ -0.53
CCL28-202ENST00000489442 SLC35F4A4IF30 521 aa11.74□□□□□ -0.53
CCL28-202ENST00000489442 M0R1B8 84 aa11.74□□□□□ -0.53
CCL28-202ENST00000489442 M0R3G1 203 aa11.74□□□□□ -0.53
CCL28-202ENST00000489442 ABCD4O14678 606 aa11.74□□□□□ -0.53
CCL28-202ENST00000489442 HS3ST1O14792 307 aa11.74□□□□□ -0.53
CCL28-202ENST00000489442 SMPD2O60906 423 aa11.74□□□□□ -0.53
CCL28-202ENST00000489442 ZNF432O94892 652 aa11.74□□□□□ -0.53
CCL28-202ENST00000489442 FUT1P19526 365 aa11.74□□□□□ -0.53
CCL28-202ENST00000489442 PTAFRP25105 342 aa11.74□□□□□ -0.53
CCL28-202ENST00000489442 SH3BGRP55822 239 aaPredicted RBP11.74□□□□□ -0.53
CCL28-202ENST00000489442 UBE2NP61088 152 aaKnown RBP11.74□□□□□ -0.53
CCL28-202ENST00000489442 SLC25A3Q00325 362 aa11.74□□□□□ -0.53
CCL28-202ENST00000489442 TESK1Q15569 626 aa11.74□□□□□ -0.53
CCL28-202ENST00000489442 HIKESHIQ53FT3 197 aa11.74□□□□□ -0.53
CCL28-202ENST00000489442 SAMD4BQ5PRF9 694 aaKnown RBP11.74□□□□□ -0.53
CCL28-202ENST00000489442 ADAM5Q6NVV9 412 aa11.74□□□□□ -0.53
CCL28-202ENST00000489442 SPNS3Q6ZMD2 512 aa11.74□□□□□ -0.53
CCL28-202ENST00000489442 PGAM4Q8N0Y7 254 aa11.74□□□□□ -0.53
CCL28-202ENST00000489442 DEPDC4Q8N2C3 294 aa11.74□□□□□ -0.53
CCL28-202ENST00000489442 ANKK1Q8NFD2 765 aa11.74□□□□□ -0.53
CCL28-202ENST00000489442 OR1K1Q8NGR3 316 aa11.74□□□□□ -0.53
CCL28-202ENST00000489442 OR6N1Q8NGY5 312 aa11.74□□□□□ -0.53
CCL28-202ENST00000489442 PFN4Q8NHR9 129 aa11.74□□□□□ -0.53
CCL28-202ENST00000489442 SGTBQ96EQ0 304 aa11.74□□□□□ -0.53
CCL28-202ENST00000489442 TXNDC15Q96J42 360 aa11.74□□□□□ -0.53
CCL28-202ENST00000489442 CDRT15Q96T59 188 aa11.74□□□□□ -0.53
CCL28-202ENST00000489442 CRLF2Q9HC73 371 aa11.74□□□□□ -0.53
CCL28-202ENST00000489442 MEPEQ9NQ76 525 aaPredicted RBP11.74□□□□□ -0.53
CCL28-202ENST00000489442 NPAP1Q9NZP6 1156 aa11.74□□□□□ -0.53
CCL28-202ENST00000489442 RHCGQ9UBD6 479 aa11.74□□□□□ -0.53
CCL28-202ENST00000489442 POU2F3Q9UKI9 436 aa11.74□□□□□ -0.53
CCL28-202ENST00000489442 SAMD4AQ9UPU9 718 aaKnown RBP11.74□□□□□ -0.53
CCL28-202ENST00000489442 MGAT4BQ9UQ53 548 aa11.74□□□□□ -0.53
CCL28-202ENST00000489442 FAM32AQ9Y421 112 aaKnown RBP11.74□□□□□ -0.53
CCL28-202ENST00000489442 ACANP16112 2415 aa11.73□□□□□ -0.53
CCL28-202ENST00000489442 A0A096LPE4 126 aa11.73□□□□□ -0.53
CCL28-202ENST00000489442 A0A1W2PPZ6 126 aa11.73□□□□□ -0.53
CCL28-202ENST00000489442 OR7A10O76100 309 aa11.73□□□□□ -0.53
CCL28-202ENST00000489442 IFNGR1P15260 489 aa11.73□□□□□ -0.53
CCL28-202ENST00000489442 UGT2B15P54855 530 aa11.73□□□□□ -0.53
CCL28-202ENST00000489442 BIDP55957 195 aa11.73□□□□□ -0.53
CCL28-202ENST00000489442 ARF1P84077 181 aaKnown RBP11.73□□□□□ -0.53
CCL28-202ENST00000489442 ZP4Q12836 540 aa11.73□□□□□ -0.53
CCL28-202ENST00000489442 CAMK2DQ13557 499 aa11.73□□□□□ -0.53
CCL28-202ENST00000489442 TRAM2Q15035 370 aa11.73□□□□□ -0.53
CCL28-202ENST00000489442 CEACAM16Q2WEN9 425 aa11.73□□□□□ -0.53
CCL28-202ENST00000489442 TBRG1Q3YBR2 411 aa11.73□□□□□ -0.53
CCL28-202ENST00000489442 C1QTNF12Q5T7M4 302 aa11.73□□□□□ -0.53
CCL28-202ENST00000489442 ANKRD16Q6P6B7 361 aa11.73□□□□□ -0.53
CCL28-202ENST00000489442 SLC22A25Q6T423 547 aa11.73□□□□□ -0.53
CCL28-202ENST00000489442 SLC35D2Q76EJ3 337 aa11.73□□□□□ -0.53
CCL28-202ENST00000489442 LINGO2Q7L985 606 aa11.73□□□□□ -0.53
CCL28-202ENST00000489442 RRM2BQ7LG56 351 aa11.73□□□□□ -0.53
CCL28-202ENST00000489442 DEFB107AQ8IZN7 70 aa11.73□□□□□ -0.53
CCL28-202ENST00000489442 FITM2Q8N6M3 262 aa11.73□□□□□ -0.53
CCL28-202ENST00000489442 ZNF611Q8N823 705 aa11.73□□□□□ -0.53
CCL28-202ENST00000489442 WDR31Q8NA23 367 aa11.73□□□□□ -0.53
CCL28-202ENST00000489442 FAM156AQ8NDB6 213 aa11.73□□□□□ -0.53
CCL28-202ENST00000489442 KBTBD8Q8NFY9 601 aa11.73□□□□□ -0.53
CCL28-202ENST00000489442 TMEM171Q8WVE6 324 aa11.73□□□□□ -0.53
CCL28-202ENST00000489442 FBXW5Q969U6 566 aa11.73□□□□□ -0.53
CCL28-202ENST00000489442 NSL1Q96IY1 281 aa11.73□□□□□ -0.53
CCL28-202ENST00000489442 RADILQ96JH8 1075 aa11.73□□□□□ -0.53
CCL28-202ENST00000489442 GPR35Q9HC97 309 aa11.73□□□□□ -0.53
CCL28-202ENST00000489442 OBP2BQ9NPH6 170 aa11.73□□□□□ -0.53
CCL28-202ENST00000489442 TAS2R5Q9NYW4 299 aa11.73□□□□□ -0.53
CCL28-202ENST00000489442 ADAM21Q9UKJ8 722 aa11.73□□□□□ -0.53
CCL28-202ENST00000489442 A4GNTQ9UNA3 340 aa11.73□□□□□ -0.53
CCL28-202ENST00000489442 SNX13Q9Y5W8 968 aa11.73□□□□□ -0.53
CCL28-202ENST00000489442 A0A1W2PRG6 482 aa11.72□□□□□ -0.53
CCL28-202ENST00000489442 B2RBV5 119 aa11.72□□□□□ -0.53
CCL28-202ENST00000489442 RPL36A-HNRNPH2H7BZ11 118 aa11.72□□□□□ -0.53
CCL28-202ENST00000489442 J3KTA2 159 aa11.72□□□□□ -0.53
CCL28-202ENST00000489442 BCL10O95999 233 aa11.72□□□□□ -0.53
CCL28-202ENST00000489442 ASAH2BP0C7U1 165 aa11.72□□□□□ -0.53
CCL28-202ENST00000489442 IFI30P13284 250 aa11.72□□□□□ -0.53
CCL28-202ENST00000489442 HSD17B1P14061 328 aa11.72□□□□□ -0.53
CCL28-202ENST00000489442 CD40P25942 277 aa11.72□□□□□ -0.53
CCL28-202ENST00000489442 KRT72Q14CN4 511 aa11.72□□□□□ -0.53
CCL28-202ENST00000489442 ZNF672Q499Z4 452 aaPredicted RBP11.72□□□□□ -0.53
CCL28-202ENST00000489442 SEZ6L2Q6UXD5 910 aa11.72□□□□□ -0.53
CCL28-202ENST00000489442 C20orf196Q8IYI0 205 aa11.72□□□□□ -0.53
CCL28-202ENST00000489442 CDK20Q8IZL9 346 aa11.72□□□□□ -0.53
CCL28-202ENST00000489442 OFCC1Q8IZS5 231 aa11.72□□□□□ -0.53
CCL28-202ENST00000489442 TMEM123Q8N131 208 aa11.72□□□□□ -0.53
CCL28-202ENST00000489442 BCL2L2Q92843 193 aaPredicted RBP11.72□□□□□ -0.53
CCL28-202ENST00000489442 BPIFA2Q96DR5 249 aa11.72□□□□□ -0.53
CCL28-202ENST00000489442 LRR1Q96L50 414 aa11.72□□□□□ -0.53
CCL28-202ENST00000489442 ADAD1Q96M93 576 aaKnown RBP11.72□□□□□ -0.53
CCL28-202ENST00000489442 PIP5K1AQ99755 562 aa11.72□□□□□ -0.53
CCL28-202ENST00000489442 KCNS3Q9BQ31 491 aa11.72□□□□□ -0.53
CCL28-202ENST00000489442 ULBP2Q9BZM5 246 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms