RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 HPRP00739 348 aa12.53□□□□□ -0.4
BRCA1-218ENST00000489037 HOXB1P14653 301 aaPredicted RBP12.53□□□□□ -0.4
BRCA1-218ENST00000489037 FUT1P19526 365 aa12.53□□□□□ -0.4
BRCA1-218ENST00000489037 ZP4Q12836 540 aa12.53□□□□□ -0.4
BRCA1-218ENST00000489037 CARD17Q5XLA6 110 aa12.53□□□□□ -0.4
BRCA1-218ENST00000489037 GLYATQ6IB77 296 aa12.53□□□□□ -0.4
BRCA1-218ENST00000489037 ANKRD16Q6P6B7 361 aa12.53□□□□□ -0.4
BRCA1-218ENST00000489037 VTCN1Q7Z7D3 282 aa12.53□□□□□ -0.4
BRCA1-218ENST00000489037 TSPYL5Q86VY4 417 aaPredicted RBP12.53□□□□□ -0.4
BRCA1-218ENST00000489037 NKAIN4Q8IVV8 208 aa12.53□□□□□ -0.4
BRCA1-218ENST00000489037 PIAS4Q8N2W9 510 aaPredicted RBP12.53□□□□□ -0.4
BRCA1-218ENST00000489037 WDR31Q8NA23 367 aa12.53□□□□□ -0.4
BRCA1-218ENST00000489037 OR1K1Q8NGR3 316 aa12.53□□□□□ -0.4
BRCA1-218ENST00000489037 OR6N1Q8NGY5 312 aa12.53□□□□□ -0.4
BRCA1-218ENST00000489037 HSH2DQ96JZ2 352 aa12.53□□□□□ -0.4
BRCA1-218ENST00000489037 LRR1Q96L50 414 aa12.53□□□□□ -0.4
BRCA1-218ENST00000489037 ADAD1Q96M93 576 aaKnown RBP12.53□□□□□ -0.4
BRCA1-218ENST00000489037 OR2M2Q96R28 347 aa12.53□□□□□ -0.4
BRCA1-218ENST00000489037 C1QTNF6Q9BXI9 259 aa12.53□□□□□ -0.4
BRCA1-218ENST00000489037 CXorf56Q9H5V9 222 aa12.53□□□□□ -0.4
BRCA1-218ENST00000489037 GPR35Q9HC97 309 aa12.53□□□□□ -0.4
BRCA1-218ENST00000489037 MOV10Q9HCE1 1003 aaKnown RBP12.53□□□□□ -0.4
BRCA1-218ENST00000489037 EGFL7Q9UHF1 273 aa12.53□□□□□ -0.4
BRCA1-218ENST00000489037 POU2F3Q9UKI9 436 aa12.53□□□□□ -0.4
BRCA1-218ENST00000489037 BLOC1S5-TXNDC5H3BN57 136 aa12.52□□□□□ -0.41
BRCA1-218ENST00000489037 RPL36A-HNRNPH2H7BZ11 118 aa12.52□□□□□ -0.41
BRCA1-218ENST00000489037 M0R3G1 203 aa12.52□□□□□ -0.41
BRCA1-218ENST00000489037 FAM107AO95990 144 aa12.52□□□□□ -0.41
BRCA1-218ENST00000489037 IGF2P01344 180 aa12.52□□□□□ -0.41
BRCA1-218ENST00000489037 HLA-DOBP13765 273 aa12.52□□□□□ -0.41
BRCA1-218ENST00000489037 NCK1P16333 377 aa12.52□□□□□ -0.41
BRCA1-218ENST00000489037 YAP1P46937 504 aaKnown RBP12.52□□□□□ -0.41
BRCA1-218ENST00000489037 LGALS3BPQ08380 585 aa12.52□□□□□ -0.41
BRCA1-218ENST00000489037 CAMK2DQ13557 499 aa12.52□□□□□ -0.41
BRCA1-218ENST00000489037 TRAM2Q15035 370 aa12.52□□□□□ -0.41
BRCA1-218ENST00000489037 TBRG1Q3YBR2 411 aa12.52□□□□□ -0.41
BRCA1-218ENST00000489037 ZNF672Q499Z4 452 aaPredicted RBP12.52□□□□□ -0.41
BRCA1-218ENST00000489037 HIKESHIQ53FT3 197 aa12.52□□□□□ -0.41
BRCA1-218ENST00000489037 SAMD4BQ5PRF9 694 aaKnown RBP12.52□□□□□ -0.41
BRCA1-218ENST00000489037 SLC22A25Q6T423 547 aa12.52□□□□□ -0.41
BRCA1-218ENST00000489037 SLC35D2Q76EJ3 337 aa12.52□□□□□ -0.41
BRCA1-218ENST00000489037 RRM2BQ7LG56 351 aa12.52□□□□□ -0.41
BRCA1-218ENST00000489037 C20orf196Q8IYI0 205 aa12.52□□□□□ -0.41
BRCA1-218ENST00000489037 CDK20Q8IZL9 346 aa12.52□□□□□ -0.41
BRCA1-218ENST00000489037 PGAM4Q8N0Y7 254 aa12.52□□□□□ -0.41
BRCA1-218ENST00000489037 CCDC197Q8NCU1 140 aa12.52□□□□□ -0.41
BRCA1-218ENST00000489037 TMEM255BQ8WV15 326 aa12.52□□□□□ -0.41
BRCA1-218ENST00000489037 BOD1Q96IK1 185 aa12.52□□□□□ -0.41
BRCA1-218ENST00000489037 TXNDC15Q96J42 360 aa12.52□□□□□ -0.41
BRCA1-218ENST00000489037 KCNS3Q9BQ31 491 aa12.52□□□□□ -0.41
BRCA1-218ENST00000489037 EMC6Q9BV81 110 aa12.52□□□□□ -0.41
BRCA1-218ENST00000489037 CRLF2Q9HC73 371 aa12.52□□□□□ -0.41
BRCA1-218ENST00000489037 MEPEQ9NQ76 525 aaPredicted RBP12.52□□□□□ -0.41
BRCA1-218ENST00000489037 ARL8BQ9NVJ2 186 aa12.52□□□□□ -0.41
BRCA1-218ENST00000489037 FAIMQ9NVQ4 179 aa12.52□□□□□ -0.41
BRCA1-218ENST00000489037 MED29Q9NX70 200 aa12.52□□□□□ -0.41
BRCA1-218ENST00000489037 NPAP1Q9NZP6 1156 aa12.52□□□□□ -0.41
BRCA1-218ENST00000489037 A4GNTQ9UNA3 340 aa12.52□□□□□ -0.41
BRCA1-218ENST00000489037 SAMD4AQ9UPU9 718 aaKnown RBP12.52□□□□□ -0.41
BRCA1-218ENST00000489037 POFUT2Q9Y2G5 429 aa12.52□□□□□ -0.41
BRCA1-218ENST00000489037 FAM32AQ9Y421 112 aaKnown RBP12.52□□□□□ -0.41
BRCA1-218ENST00000489037 USF3Q68DE3 2245 aa12.52□□□□□ -0.41
BRCA1-218ENST00000489037 OTOGQ6ZRI0 2925 aa12.51□□□□□ -0.41
BRCA1-218ENST00000489037 A0A1W2PRG6 482 aa12.51□□□□□ -0.41
BRCA1-218ENST00000489037 OR7A10O76100 309 aa12.51□□□□□ -0.41
BRCA1-218ENST00000489037 ASAH2BP0C7U1 165 aa12.51□□□□□ -0.41
BRCA1-218ENST00000489037 IFNGR1P15260 489 aa12.51□□□□□ -0.41
BRCA1-218ENST00000489037 TCN1P20061 433 aaPredicted RBP12.51□□□□□ -0.41
BRCA1-218ENST00000489037 CD40P25942 277 aa12.51□□□□□ -0.41
BRCA1-218ENST00000489037 CSNK1A1P48729 337 aa12.51□□□□□ -0.41
BRCA1-218ENST00000489037 UGT2B15P54855 530 aa12.51□□□□□ -0.41
BRCA1-218ENST00000489037 CDH11P55287 796 aa12.51□□□□□ -0.41
BRCA1-218ENST00000489037 BIDP55957 195 aa12.51□□□□□ -0.41
BRCA1-218ENST00000489037 NKX6-1P78426 367 aaPredicted RBP12.51□□□□□ -0.41
BRCA1-218ENST00000489037 ARF1P84077 181 aaKnown RBP12.51□□□□□ -0.41
BRCA1-218ENST00000489037 KRT72Q14CN4 511 aa12.51□□□□□ -0.41
BRCA1-218ENST00000489037 CEACAM16Q2WEN9 425 aa12.51□□□□□ -0.41
BRCA1-218ENST00000489037 SHEQ5VZ18 495 aa12.51□□□□□ -0.41
BRCA1-218ENST00000489037 SEZ6L2Q6UXD5 910 aa12.51□□□□□ -0.41
BRCA1-218ENST00000489037 HDDC2Q7Z4H3 204 aa12.51□□□□□ -0.41
BRCA1-218ENST00000489037 CCDC36Q8IYA8 594 aa12.51□□□□□ -0.41
BRCA1-218ENST00000489037 OFCC1Q8IZS5 231 aa12.51□□□□□ -0.41
BRCA1-218ENST00000489037 TMEM123Q8N131 208 aa12.51□□□□□ -0.41
BRCA1-218ENST00000489037 LRRC75A-AS1Q8N1F1 130 aa12.51□□□□□ -0.41
BRCA1-218ENST00000489037 LRRC17Q8N6Y2 441 aa12.51□□□□□ -0.41
BRCA1-218ENST00000489037 RNF148Q8N7C7 305 aa12.51□□□□□ -0.41
BRCA1-218ENST00000489037 KBTBD8Q8NFY9 601 aa12.51□□□□□ -0.41
BRCA1-218ENST00000489037 PFN4Q8NHR9 129 aa12.51□□□□□ -0.41
BRCA1-218ENST00000489037 MAGEE2Q8TD90 523 aaPredicted RBP12.51□□□□□ -0.41
BRCA1-218ENST00000489037 BCL2L2Q92843 193 aaPredicted RBP12.51□□□□□ -0.41
BRCA1-218ENST00000489037 CDRT15Q96T59 188 aa12.51□□□□□ -0.41
BRCA1-218ENST00000489037 ULBP2Q9BZM5 246 aa12.51□□□□□ -0.41
BRCA1-218ENST00000489037 TAS2R5Q9NYW4 299 aa12.51□□□□□ -0.41
BRCA1-218ENST00000489037 CISD1Q9NZ45 108 aaKnown RBP12.51□□□□□ -0.41
BRCA1-218ENST00000489037 MAGEL2Q9UJ55 1249 aa12.51□□□□□ -0.41
BRCA1-218ENST00000489037 ITPR3Q14573 2671 aa12.51□□□□□ -0.41
BRCA1-218ENST00000489037 A0A096LPE4 126 aa12.5□□□□□ -0.41
BRCA1-218ENST00000489037 A0A1W2PPZ6 126 aa12.5□□□□□ -0.41
BRCA1-218ENST00000489037 MCIDASD6RGH6 385 aa12.5□□□□□ -0.41
BRCA1-218ENST00000489037 BCL10O95999 233 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms