RNA–Protein interactions for RNA: ENST00000472807.1

CHEK2-223, Transcript of checkpoint kinase 2, human

TSL 2

Gene CHEK2, Length 514 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHEK2-223	ENST00000472807	CEACAM16	Q2WEN9	425 aa		7.76	□□□□□ -1.17
CHEK2-223	ENST00000472807	TMEM249	Q2WGJ8	235 aa		7.76	□□□□□ -1.17
CHEK2-223	ENST00000472807	RUNDC3A	Q59EK9	446 aa		7.76	□□□□□ -1.17
CHEK2-223	ENST00000472807	C6orf52	Q5T4I8	152 aa		7.76	□□□□□ -1.17
CHEK2-223	ENST00000472807	CARD17	Q5XLA6	110 aa		7.76	□□□□□ -1.17
CHEK2-223	ENST00000472807	ZNF613	Q6PF04	617 aa		7.76	□□□□□ -1.17
CHEK2-223	ENST00000472807	VHLL	Q6RSH7	139 aa		7.76	□□□□□ -1.17
CHEK2-223	ENST00000472807	DLEU7	Q6UYE1	221 aa		7.76	□□□□□ -1.17
CHEK2-223	ENST00000472807	SNX32	Q86XE0	403 aa		7.76	□□□□□ -1.17
CHEK2-223	ENST00000472807	PTOV1	Q86YD1	416 aa		7.76	□□□□□ -1.17
CHEK2-223	ENST00000472807	CCDC36	Q8IYA8	594 aa		7.76	□□□□□ -1.17
CHEK2-223	ENST00000472807	TMEM123	Q8N131	208 aa		7.76	□□□□□ -1.17
CHEK2-223	ENST00000472807	DPP10	Q8N608	796 aa		7.76	□□□□□ -1.17
CHEK2-223	ENST00000472807	SMYD1	Q8NB12	490 aa		7.76	□□□□□ -1.17
CHEK2-223	ENST00000472807	NUP37	Q8NFH4	326 aa		7.76	□□□□□ -1.17
CHEK2-223	ENST00000472807	C10orf105	Q8TEF2	133 aa		7.76	□□□□□ -1.17
CHEK2-223	ENST00000472807	CKAP2	Q8WWK9	683 aa		7.76	□□□□□ -1.17
CHEK2-223	ENST00000472807	PROX1	Q92786	737 aa		7.76	□□□□□ -1.17
CHEK2-223	ENST00000472807	THOC1	Q96FV9	657 aa	Known RBP	7.76	□□□□□ -1.17
CHEK2-223	ENST00000472807	SLC41A3	Q96GZ6	507 aa		7.76	□□□□□ -1.17
CHEK2-223	ENST00000472807	TNFRSF13C	Q96RJ3	184 aa		7.76	□□□□□ -1.17
CHEK2-223	ENST00000472807	CGREF1	Q99674	301 aa		7.76	□□□□□ -1.17
CHEK2-223	ENST00000472807	PIMREG	Q9BSJ6	248 aa		7.76	□□□□□ -1.17
CHEK2-223	ENST00000472807	TMEM43	Q9BTV4	400 aa		7.76	□□□□□ -1.17
CHEK2-223	ENST00000472807	PRR14	Q9BWN1	585 aa		7.76	□□□□□ -1.17
CHEK2-223	ENST00000472807	RSPO3	Q9BXY4	272 aa	Predicted RBP	7.76	□□□□□ -1.17
CHEK2-223	ENST00000472807	NELFA	Q9H3P2	528 aa		7.76	□□□□□ -1.17
CHEK2-223	ENST00000472807	NPHS2	Q9NP85	383 aa		7.76	□□□□□ -1.17
CHEK2-223	ENST00000472807	MYOZ1	Q9NP98	299 aa	Predicted RBP	7.76	□□□□□ -1.17
CHEK2-223	ENST00000472807	B3GAT2	Q9NPZ5	323 aa		7.76	□□□□□ -1.17
CHEK2-223	ENST00000472807	FBXO9	Q9UK97	447 aa	Predicted RBP	7.76	□□□□□ -1.17
CHEK2-223	ENST00000472807	ADAM21	Q9UKJ8	722 aa		7.76	□□□□□ -1.17
CHEK2-223	ENST00000472807	NOX1	Q9Y5S8	564 aa		7.76	□□□□□ -1.17
CHEK2-223	ENST00000472807		A0A0G2JND7	137 aa		7.75	□□□□□ -1.17
CHEK2-223	ENST00000472807	ZNF726	A6NNF4	738 aa		7.75	□□□□□ -1.17
CHEK2-223	ENST00000472807	VSTM5	A8MXK1	200 aa		7.75	□□□□□ -1.17
CHEK2-223	ENST00000472807		M0R3H8	397 aa		7.75	□□□□□ -1.17
CHEK2-223	ENST00000472807	NDUFS8	O00217	210 aa		7.75	□□□□□ -1.17
CHEK2-223	ENST00000472807	CHP2	O43745	196 aa		7.75	□□□□□ -1.17
CHEK2-223	ENST00000472807	GPRIN2	O60269	458 aa		7.75	□□□□□ -1.17
CHEK2-223	ENST00000472807	SEC14L2	O76054	403 aa		7.75	□□□□□ -1.17
CHEK2-223	ENST00000472807	HPR	P00739	348 aa		7.75	□□□□□ -1.17
CHEK2-223	ENST00000472807	MT-ATP6	P00846	226 aa		7.75	□□□□□ -1.17
CHEK2-223	ENST00000472807	IFNA2	P01563	188 aa		7.75	□□□□□ -1.17
CHEK2-223	ENST00000472807	BGLAP	P02818	100 aa		7.75	□□□□□ -1.17
CHEK2-223	ENST00000472807	OPN1SW	P03999	348 aa		7.75	□□□□□ -1.17
CHEK2-223	ENST00000472807	C8B	P07358	591 aa		7.75	□□□□□ -1.17
CHEK2-223	ENST00000472807	CBR1	P16152	277 aa		7.75	□□□□□ -1.17
CHEK2-223	ENST00000472807	USF1	P22415	310 aa	Predicted RBP	7.75	□□□□□ -1.17
CHEK2-223	ENST00000472807	AHCY	P23526	432 aa		7.75	□□□□□ -1.17
CHEK2-223	ENST00000472807	CALCR	P30988	508 aa		7.75	□□□□□ -1.17
CHEK2-223	ENST00000472807	PPOX	P50336	477 aa		7.75	□□□□□ -1.17
CHEK2-223	ENST00000472807	PDLIM4	P50479	330 aa		7.75	□□□□□ -1.17
CHEK2-223	ENST00000472807	IDH3G	P51553	393 aa	Predicted RBP	7.75	□□□□□ -1.17
CHEK2-223	ENST00000472807	VLDLR	P98155	873 aa		7.75	□□□□□ -1.17
CHEK2-223	ENST00000472807	NFYC	Q13952	458 aa		7.75	□□□□□ -1.17
CHEK2-223	ENST00000472807	EFNB3	Q15768	340 aa		7.75	□□□□□ -1.17
CHEK2-223	ENST00000472807	ADIPOQ	Q15848	244 aa		7.75	□□□□□ -1.17
CHEK2-223	ENST00000472807	CARTPT	Q16568	116 aa		7.75	□□□□□ -1.17
CHEK2-223	ENST00000472807	CHRFAM7A	Q494W8	412 aa		7.75	□□□□□ -1.17
CHEK2-223	ENST00000472807	INTS11	Q5TA45	600 aa	Known RBP	7.75	□□□□□ -1.17
CHEK2-223	ENST00000472807	PATL1	Q86TB9	770 aa	Known RBP	7.75	□□□□□ -1.17
CHEK2-223	ENST00000472807	MDP1	Q86V88	176 aa		7.75	□□□□□ -1.17
CHEK2-223	ENST00000472807	C20orf196	Q8IYI0	205 aa		7.75	□□□□□ -1.17
CHEK2-223	ENST00000472807	OR6N1	Q8NGY5	312 aa		7.75	□□□□□ -1.17
CHEK2-223	ENST00000472807	OR5J2	Q8NH18	312 aa		7.75	□□□□□ -1.17
CHEK2-223	ENST00000472807	TSPEAR	Q8WU66	669 aa		7.75	□□□□□ -1.17
CHEK2-223	ENST00000472807	NANOS1	Q8WY41	292 aa	Known RBP	7.75	□□□□□ -1.17
CHEK2-223	ENST00000472807	LRR1	Q96L50	414 aa		7.75	□□□□□ -1.17
CHEK2-223	ENST00000472807	ANKRD27	Q96NW4	1050 aa		7.75	□□□□□ -1.17
CHEK2-223	ENST00000472807	MOGAT1	Q96PD6	335 aa		7.75	□□□□□ -1.17
CHEK2-223	ENST00000472807	SORCS2	Q96PQ0	1159 aa		7.75	□□□□□ -1.17
CHEK2-223	ENST00000472807	MCHR1	Q99705	422 aa		7.75	□□□□□ -1.17
CHEK2-223	ENST00000472807	ARHGDIG	Q99819	225 aa		7.75	□□□□□ -1.17
CHEK2-223	ENST00000472807	VRK1	Q99986	396 aa	Predicted RBP	7.75	□□□□□ -1.17
CHEK2-223	ENST00000472807	ZNF385D	Q9H6B1	395 aa		7.75	□□□□□ -1.17
CHEK2-223	ENST00000472807	ZNF442	Q9H7R0	627 aa		7.75	□□□□□ -1.17
CHEK2-223	ENST00000472807	VIPAS39	Q9H9C1	493 aa		7.75	□□□□□ -1.17
CHEK2-223	ENST00000472807	SEC61A2	Q9H9S3	476 aa		7.75	□□□□□ -1.17
CHEK2-223	ENST00000472807	MED29	Q9NX70	200 aa		7.75	□□□□□ -1.17
CHEK2-223	ENST00000472807	MRPL39	Q9NYK5	338 aa	Known RBP	7.75	□□□□□ -1.17
CHEK2-223	ENST00000472807	CDC42EP3	Q9UKI2	254 aa		7.75	□□□□□ -1.17
CHEK2-223	ENST00000472807	USP22	Q9UPT9	525 aa		7.75	□□□□□ -1.17
CHEK2-223	ENST00000472807	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	7.75	□□□□□ -1.17
CHEK2-223	ENST00000472807	FBN3	Q75N90	2809 aa		7.74	□□□□□ -1.17
CHEK2-223	ENST00000472807	IGHV2OR16-5	A0A0B4J2B6	119 aa		7.74	□□□□□ -1.17
CHEK2-223	ENST00000472807	SLC35F4	A4IF30	521 aa		7.74	□□□□□ -1.17
CHEK2-223	ENST00000472807	CPSF4L	A6NMK7	179 aa	Known RBP	7.74	□□□□□ -1.17
CHEK2-223	ENST00000472807	MS4A18	H0YCH9	400 aa		7.74	□□□□□ -1.17
CHEK2-223	ENST00000472807		M0QX08	132 aa		7.74	□□□□□ -1.17
CHEK2-223	ENST00000472807	PLPP3	O14495	311 aa		7.74	□□□□□ -1.17
CHEK2-223	ENST00000472807	TPST2	O60704	377 aa		7.74	□□□□□ -1.17
CHEK2-223	ENST00000472807	EDF1	O60869	148 aa	Known RBP	7.74	□□□□□ -1.17
CHEK2-223	ENST00000472807	SERPINI2	O75830	405 aa		7.74	□□□□□ -1.17
CHEK2-223	ENST00000472807	LY6H	O94772	140 aa		7.74	□□□□□ -1.17
CHEK2-223	ENST00000472807	OR6A2	O95222	327 aa		7.74	□□□□□ -1.17
CHEK2-223	ENST00000472807	CELA3B	P08861	270 aa		7.74	□□□□□ -1.17
CHEK2-223	ENST00000472807	ADORA3	P0DMS8	318 aa		7.74	□□□□□ -1.17
CHEK2-223	ENST00000472807	CD79A	P11912	226 aa		7.74	□□□□□ -1.17
CHEK2-223	ENST00000472807	HLA-DOB	P13765	273 aa		7.74	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms