RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 IGFBP1P08833 259 aaPredicted RBP21.2■□□□□ 0.98
PTCH1-210ENST00000468211 NPRL3Q12980 569 aa21.2■□□□□ 0.98
PTCH1-210ENST00000468211 C20orf196Q8IYI0 205 aa21.2■□□□□ 0.98
PTCH1-210ENST00000468211 ZCCHC24Q8N2G6 241 aaKnown RBP21.2■□□□□ 0.98
PTCH1-210ENST00000468211 NUP37Q8NFH4 326 aa21.2■□□□□ 0.98
PTCH1-210ENST00000468211 PIMREGQ9BSJ6 248 aa21.2■□□□□ 0.98
PTCH1-210ENST00000468211 REPIN1Q9BWE0 567 aaKnown RBP21.2■□□□□ 0.98
PTCH1-210ENST00000468211 BEX2Q9BXY8 128 aa21.2■□□□□ 0.98
PTCH1-210ENST00000468211 NOX3Q9HBY0 568 aa21.2■□□□□ 0.98
PTCH1-210ENST00000468211 MED29Q9NX70 200 aa21.2■□□□□ 0.98
PTCH1-210ENST00000468211 TMEM129A0AVI4 362 aa21.19■□□□□ 0.98
PTCH1-210ENST00000468211 ZNF99A8MXY4 864 aaPredicted RBP21.19■□□□□ 0.98
PTCH1-210ENST00000468211 NDUFS8O00217 210 aa21.19■□□□□ 0.98
PTCH1-210ENST00000468211 LMX1BO60663 402 aa21.19■□□□□ 0.98
PTCH1-210ENST00000468211 MFN2O95140 757 aa21.19■□□□□ 0.98
PTCH1-210ENST00000468211 NQO1P15559 274 aaKnown RBP21.19■□□□□ 0.98
PTCH1-210ENST00000468211 SLC6A2P23975 617 aa21.19■□□□□ 0.98
PTCH1-210ENST00000468211 IGFBP5P24593 272 aa21.19■□□□□ 0.98
PTCH1-210ENST00000468211 PPOXP50336 477 aa21.19■□□□□ 0.98
PTCH1-210ENST00000468211 CDH12P55289 794 aa21.19■□□□□ 0.98
PTCH1-210ENST00000468211 TTMPQ5BVD1 217 aa21.19■□□□□ 0.98
PTCH1-210ENST00000468211 PTOV1Q86YD1 416 aa21.19■□□□□ 0.98
PTCH1-210ENST00000468211 UEVLDQ8IX04 471 aa21.19■□□□□ 0.98
PTCH1-210ENST00000468211 SMYD1Q8NB12 490 aa21.19■□□□□ 0.98
PTCH1-210ENST00000468211 MSI2Q96DH6 328 aaKnown RBP21.19■□□□□ 0.98
PTCH1-210ENST00000468211 DOK1Q99704 481 aa21.19■□□□□ 0.98
PTCH1-210ENST00000468211 ZNF442Q9H7R0 627 aa21.19■□□□□ 0.98
PTCH1-210ENST00000468211 TMEM27Q9HBJ8 222 aa21.19■□□□□ 0.98
PTCH1-210ENST00000468211 B3GNT2Q9NY97 397 aa21.19■□□□□ 0.98
PTCH1-210ENST00000468211 LOC390937A0A1W2PQ73 354 aa21.18■□□□□ 0.98
PTCH1-210ENST00000468211 hCG_2039718K7EN88 272 aa21.18■□□□□ 0.98
PTCH1-210ENST00000468211 PHF1O43189 567 aaPredicted RBP21.18■□□□□ 0.98
PTCH1-210ENST00000468211 ARR3P36575 388 aa21.18■□□□□ 0.98
PTCH1-210ENST00000468211 CAPZA2P47755 286 aa21.18■□□□□ 0.98
PTCH1-210ENST00000468211 ATP4BP51164 291 aa21.18■□□□□ 0.98
PTCH1-210ENST00000468211 NCALDP61601 193 aa21.18■□□□□ 0.98
PTCH1-210ENST00000468211 POU3F1Q03052 451 aaPredicted RBP21.18■□□□□ 0.98
PTCH1-210ENST00000468211 RUNDC3AQ59EK9 446 aa21.18■□□□□ 0.98
PTCH1-210ENST00000468211 ARMC8Q8IUR7 673 aa21.18■□□□□ 0.98
PTCH1-210ENST00000468211 SVOPLQ8N434 492 aa21.18■□□□□ 0.98
PTCH1-210ENST00000468211 HIPK4Q8NE63 616 aa21.18■□□□□ 0.98
PTCH1-210ENST00000468211 OR6S1Q8NH40 331 aa21.18■□□□□ 0.98
PTCH1-210ENST00000468211 ZNF607Q96SK3 696 aa21.18■□□□□ 0.98
PTCH1-210ENST00000468211 SOX7Q9BT81 388 aa21.18■□□□□ 0.98
PTCH1-210ENST00000468211 MOV10Q9HCE1 1003 aaKnown RBP21.18■□□□□ 0.98
PTCH1-210ENST00000468211 PRORSD1PA6NEY8 169 aa21.17■□□□□ 0.98
PTCH1-210ENST00000468211 EVPLLA8MZ36 301 aa21.17■□□□□ 0.98
PTCH1-210ENST00000468211 M0R3H8 397 aa21.17■□□□□ 0.98
PTCH1-210ENST00000468211 AKAP8O43823 692 aaKnown RBP21.17■□□□□ 0.98
PTCH1-210ENST00000468211 HLA-HP01893 362 aa21.17■□□□□ 0.98
PTCH1-210ENST00000468211 NPR2P20594 1047 aa21.17■□□□□ 0.98
PTCH1-210ENST00000468211 GZMKP49863 264 aa21.17■□□□□ 0.98
PTCH1-210ENST00000468211 PCBP3P57721 371 aaKnown RBP21.17■□□□□ 0.98
PTCH1-210ENST00000468211 SELPLGQ14242 412 aa21.17■□□□□ 0.98
PTCH1-210ENST00000468211 SQLEQ14534 574 aa21.17■□□□□ 0.98
PTCH1-210ENST00000468211 MSMPQ1L6U9 139 aa21.17■□□□□ 0.98
PTCH1-210ENST00000468211 IL17RELQ6ZVW7 336 aa21.17■□□□□ 0.98
PTCH1-210ENST00000468211 MS4A3Q96HJ5 214 aa21.17■□□□□ 0.98
PTCH1-210ENST00000468211 ATP6V1G3Q96LB4 118 aa21.17■□□□□ 0.98
PTCH1-210ENST00000468211 BPESC1Q9GZL8 116 aa21.17■□□□□ 0.98
PTCH1-210ENST00000468211 SELENONQ9NZV5 590 aa21.17■□□□□ 0.98
PTCH1-210ENST00000468211 CORINQ9Y5Q5 1042 aa21.17■□□□□ 0.98
PTCH1-210ENST00000468211 PMS2P3Q13401 168 aa21.16■□□□□ 0.98
PTCH1-210ENST00000468211 CAMK2DQ13557 499 aa21.16■□□□□ 0.98
PTCH1-210ENST00000468211 MFSD13AQ14CX5 517 aa21.16■□□□□ 0.98
PTCH1-210ENST00000468211 NPTX1Q15818 432 aa21.16■□□□□ 0.98
PTCH1-210ENST00000468211 DUSP7Q16829 419 aa21.16■□□□□ 0.98
PTCH1-210ENST00000468211 SPATA21Q7Z572 469 aa21.16■□□□□ 0.98
PTCH1-210ENST00000468211 CDK20Q8IZL9 346 aa21.16■□□□□ 0.98
PTCH1-210ENST00000468211 SCAIQ8N9R8 606 aa21.16■□□□□ 0.98
PTCH1-210ENST00000468211 GPR32P1Q8NGA4 272 aa21.16■□□□□ 0.98
PTCH1-210ENST00000468211 THOC1Q96FV9 657 aaKnown RBP21.16■□□□□ 0.98
PTCH1-210ENST00000468211 ZNF75AQ96N20 296 aa21.16■□□□□ 0.98
PTCH1-210ENST00000468211 EPYCQ99645 322 aa21.16■□□□□ 0.98
PTCH1-210ENST00000468211 ASPNQ9BXN1 380 aa21.16■□□□□ 0.98
PTCH1-210ENST00000468211 SHARPINQ9H0F6 387 aa21.16■□□□□ 0.98
PTCH1-210ENST00000468211 CHODLQ9H9P2 273 aa21.16■□□□□ 0.98
PTCH1-210ENST00000468211 MYOZ1Q9NP98 299 aaPredicted RBP21.16■□□□□ 0.98
PTCH1-210ENST00000468211 MRPL39Q9NYK5 338 aaKnown RBP21.16■□□□□ 0.98
PTCH1-210ENST00000468211 ZNF224Q9NZL3 707 aa21.16■□□□□ 0.98
PTCH1-210ENST00000468211 USP22Q9UPT9 525 aa21.16■□□□□ 0.98
PTCH1-210ENST00000468211 CORO2BQ9UQ03 480 aa21.16■□□□□ 0.98
PTCH1-210ENST00000468211 LOC100289279A0A1B0GTE1 492 aa21.15■□□□□ 0.98
PTCH1-210ENST00000468211 SH3PXD2BA1X283 911 aa21.15■□□□□ 0.98
PTCH1-210ENST00000468211 PLPP3O14495 311 aa21.15■□□□□ 0.98
PTCH1-210ENST00000468211 SERPINB7O75635 380 aa21.15■□□□□ 0.98
PTCH1-210ENST00000468211 OPN1SWP03999 348 aa21.15■□□□□ 0.98
PTCH1-210ENST00000468211 APEHP13798 732 aaKnown RBP21.15■□□□□ 0.98
PTCH1-210ENST00000468211 PIGFQ07326 219 aa21.15■□□□□ 0.98
PTCH1-210ENST00000468211 PUDPQ08623 228 aa21.15■□□□□ 0.98
PTCH1-210ENST00000468211 SNTB2Q13425 540 aaKnown RBP21.15■□□□□ 0.98
PTCH1-210ENST00000468211 KRT80Q6KB66 452 aa21.15■□□□□ 0.98
PTCH1-210ENST00000468211 LINC00114Q6XXX2 140 aa21.15■□□□□ 0.98
PTCH1-210ENST00000468211 WDR88Q6ZMY6 472 aa21.15■□□□□ 0.98
PTCH1-210ENST00000468211 RETREG3Q86VR2 466 aa21.15■□□□□ 0.98
PTCH1-210ENST00000468211 C10orf53Q8N6V4 93 aa21.15■□□□□ 0.98
PTCH1-210ENST00000468211 TMEM158Q8WZ71 300 aa21.15■□□□□ 0.98
PTCH1-210ENST00000468211 LRR1Q96L50 414 aa21.15■□□□□ 0.98
PTCH1-210ENST00000468211 MCHR1Q99705 422 aa21.15■□□□□ 0.98
PTCH1-210ENST00000468211 ARHGDIGQ99819 225 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms