RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 ZNF621Q6ZSS3 439 aa14.84□□□□□ -0.03
TOP3A-202ENST00000461127 TUBA1AQ71U36 451 aa14.84□□□□□ -0.03
TOP3A-202ENST00000461127 C1QL2Q7Z5L3 287 aa14.84□□□□□ -0.03
TOP3A-202ENST00000461127 TRIML2Q8N7C3 387 aa14.84□□□□□ -0.03
TOP3A-202ENST00000461127 RBM15BQ8NDT2 890 aaKnown RBP14.84□□□□□ -0.03
TOP3A-202ENST00000461127 OIT3Q8WWZ8 545 aa14.84□□□□□ -0.03
TOP3A-202ENST00000461127 RDH5Q92781 318 aa14.84□□□□□ -0.03
TOP3A-202ENST00000461127 BCL2L2Q92843 193 aaPredicted RBP14.84□□□□□ -0.03
TOP3A-202ENST00000461127 ZNF385AQ96PM9 386 aaKnown RBP14.84□□□□□ -0.03
TOP3A-202ENST00000461127 RACGAP1Q9H0H5 632 aa14.84□□□□□ -0.03
TOP3A-202ENST00000461127 MS4A5Q9H3V2 200 aa14.84□□□□□ -0.03
TOP3A-202ENST00000461127 PIF1Q9H611 641 aa14.84□□□□□ -0.03
TOP3A-202ENST00000461127 KCNE5Q9UJ90 142 aa14.84□□□□□ -0.03
TOP3A-202ENST00000461127 WNK2Q9Y3S1 2297 aa14.83□□□□□ -0.03
TOP3A-202ENST00000461127 A0A096LPE4 126 aa14.83□□□□□ -0.04
TOP3A-202ENST00000461127 TMED7-TICAM2A0A0A6YYA0 188 aa14.83□□□□□ -0.04
TOP3A-202ENST00000461127 CENPVL1A0A0U1RR11 272 aa14.83□□□□□ -0.04
TOP3A-202ENST00000461127 A0A1W2PPZ6 126 aa14.83□□□□□ -0.04
TOP3A-202ENST00000461127 M0R233 179 aa14.83□□□□□ -0.04
TOP3A-202ENST00000461127 ZNF208O43345 1280 aa14.83□□□□□ -0.04
TOP3A-202ENST00000461127 FCMRO60667 390 aa14.83□□□□□ -0.04
TOP3A-202ENST00000461127 GSNP06396 782 aa14.83□□□□□ -0.04
TOP3A-202ENST00000461127 FPR2P25090 351 aa14.83□□□□□ -0.04
TOP3A-202ENST00000461127 PGM1P36871 562 aa14.83□□□□□ -0.04
TOP3A-202ENST00000461127 SH3BGRP55822 239 aaPredicted RBP14.83□□□□□ -0.04
TOP3A-202ENST00000461127 NCALDP61601 193 aa14.83□□□□□ -0.04
TOP3A-202ENST00000461127 HBA1P69905 142 aa14.83□□□□□ -0.04
TOP3A-202ENST00000461127 MYBPC1Q00872 1141 aa14.83□□□□□ -0.04
TOP3A-202ENST00000461127 SNTB2Q13425 540 aaKnown RBP14.83□□□□□ -0.04
TOP3A-202ENST00000461127 DAG1Q14118 895 aa14.83□□□□□ -0.04
TOP3A-202ENST00000461127 ELFN2Q5R3F8 820 aa14.83□□□□□ -0.04
TOP3A-202ENST00000461127 C1orf229Q6ZS94 237 aaPredicted RBP14.83□□□□□ -0.04
TOP3A-202ENST00000461127 C16orf62Q7Z3J2 963 aa14.83□□□□□ -0.04
TOP3A-202ENST00000461127 GPAT4Q86UL3 456 aa14.83□□□□□ -0.04
TOP3A-202ENST00000461127 ZDHHC22Q8N966 263 aa14.83□□□□□ -0.04
TOP3A-202ENST00000461127 ZIC4Q8N9L1 334 aa14.83□□□□□ -0.04
TOP3A-202ENST00000461127 FAM71CQ8NEG0 241 aa14.83□□□□□ -0.04
TOP3A-202ENST00000461127 IL17RDQ8NFM7 739 aa14.83□□□□□ -0.04
TOP3A-202ENST00000461127 NANPQ8TBE9 248 aa14.83□□□□□ -0.04
TOP3A-202ENST00000461127 LRRC58Q96CX6 371 aa14.83□□□□□ -0.04
TOP3A-202ENST00000461127 ALKBH3Q96Q83 286 aaPredicted RBP14.83□□□□□ -0.04
TOP3A-202ENST00000461127 HOPXQ9BPY8 73 aaPredicted RBP14.83□□□□□ -0.04
TOP3A-202ENST00000461127 BTBD10Q9BSF8 475 aa14.83□□□□□ -0.04
TOP3A-202ENST00000461127 PAIP1Q9H074 479 aaKnown RBP14.83□□□□□ -0.04
TOP3A-202ENST00000461127 NTN4Q9HB63 628 aa14.83□□□□□ -0.04
TOP3A-202ENST00000461127 REV1Q9UBZ9 1251 aa14.83□□□□□ -0.04
TOP3A-202ENST00000461127 TMED7Q9Y3B3 224 aa14.83□□□□□ -0.04
TOP3A-202ENST00000461127 IGHV2OR16-5A0A0B4J2B6 119 aa14.82□□□□□ -0.04
TOP3A-202ENST00000461127 A0A0G2JMP0 313 aa14.82□□□□□ -0.04
TOP3A-202ENST00000461127 A0A0X1KG70 313 aa14.82□□□□□ -0.04
TOP3A-202ENST00000461127 PPIHO43447 177 aaKnown RBP14.82□□□□□ -0.04
TOP3A-202ENST00000461127 IGFBP1P08833 259 aaPredicted RBP14.82□□□□□ -0.04
TOP3A-202ENST00000461127 IMPDH2P12268 514 aa14.82□□□□□ -0.04
TOP3A-202ENST00000461127 CBR1P16152 277 aa14.82□□□□□ -0.04
TOP3A-202ENST00000461127 MATN1P21941 496 aa14.82□□□□□ -0.04
TOP3A-202ENST00000461127 CDKN2CP42773 168 aa14.82□□□□□ -0.04
TOP3A-202ENST00000461127 IDH2P48735 452 aaKnown RBP14.82□□□□□ -0.04
TOP3A-202ENST00000461127 EVX1P49640 407 aa14.82□□□□□ -0.04
TOP3A-202ENST00000461127 POLR2HP52434 150 aaKnown RBP14.82□□□□□ -0.04
TOP3A-202ENST00000461127 MAP2K6P52564 334 aa14.82□□□□□ -0.04
TOP3A-202ENST00000461127 PSME3P61289 254 aa14.82□□□□□ -0.04
TOP3A-202ENST00000461127 ARHGAP11BQ3KRB8 267 aa14.82□□□□□ -0.04
TOP3A-202ENST00000461127 LRIF1Q5T3J3 769 aa14.82□□□□□ -0.04
TOP3A-202ENST00000461127 DLEU7Q6UYE1 221 aa14.82□□□□□ -0.04
TOP3A-202ENST00000461127 RBMS3Q6XE24 437 aaKnown RBP14.82□□□□□ -0.04
TOP3A-202ENST00000461127 ARPINQ7Z6K5 226 aa14.82□□□□□ -0.04
TOP3A-202ENST00000461127 CARM1Q86X55 608 aa14.82□□□□□ -0.04
TOP3A-202ENST00000461127 DEFB107AQ8IZN7 70 aa14.82□□□□□ -0.04
TOP3A-202ENST00000461127 PGAM4Q8N0Y7 254 aa14.82□□□□□ -0.04
TOP3A-202ENST00000461127 OR4M2Q8NGB6 313 aa14.82□□□□□ -0.04
TOP3A-202ENST00000461127 OR5AK3PQ8NH89 298 aa14.82□□□□□ -0.04
TOP3A-202ENST00000461127 SLC7A6OSQ96CW6 309 aaPredicted RBP14.82□□□□□ -0.04
TOP3A-202ENST00000461127 CGREF1Q99674 301 aa14.82□□□□□ -0.04
TOP3A-202ENST00000461127 ZNF350Q9GZX5 532 aa14.82□□□□□ -0.04
TOP3A-202ENST00000461127 C1orf21Q9H246 121 aa14.82□□□□□ -0.04
TOP3A-202ENST00000461127 LRMDAQ9H2I8 198 aa14.82□□□□□ -0.04
TOP3A-202ENST00000461127 SEC61A2Q9H9S3 476 aa14.82□□□□□ -0.04
TOP3A-202ENST00000461127 ESM1Q9NQ30 184 aa14.82□□□□□ -0.04
TOP3A-202ENST00000461127 EXD2Q9NVH0 621 aa14.82□□□□□ -0.04
TOP3A-202ENST00000461127 TAS2R1Q9NYW7 299 aa14.82□□□□□ -0.04
TOP3A-202ENST00000461127 SLAMF8Q9P0V8 285 aa14.82□□□□□ -0.04
TOP3A-202ENST00000461127 VWFP04275 2813 aa14.81□□□□□ -0.04
TOP3A-202ENST00000461127 AVPP01185 164 aa14.81□□□□□ -0.04
TOP3A-202ENST00000461127 GPIP06744 558 aa14.81□□□□□ -0.04
TOP3A-202ENST00000461127 CELA3BP08861 270 aa14.81□□□□□ -0.04
TOP3A-202ENST00000461127 ZCCHC18P0CG32 403 aa14.81□□□□□ -0.04
TOP3A-202ENST00000461127 ARAFP10398 606 aa14.81□□□□□ -0.04
TOP3A-202ENST00000461127 UQCRC2P22695 453 aa14.81□□□□□ -0.04
TOP3A-202ENST00000461127 CHI3L1P36222 383 aaPredicted RBP14.81□□□□□ -0.04
TOP3A-202ENST00000461127 ARR3P36575 388 aa14.81□□□□□ -0.04
TOP3A-202ENST00000461127 RPS26P62854 115 aaKnown RBP14.81□□□□□ -0.04
TOP3A-202ENST00000461127 TMEM225Q6GV28 225 aa14.81□□□□□ -0.04
TOP3A-202ENST00000461127 ACSM5Q6NUN0 579 aa14.81□□□□□ -0.04
TOP3A-202ENST00000461127 MCUR1Q96AQ8 359 aa14.81□□□□□ -0.04
TOP3A-202ENST00000461127 SH3GL1Q99961 368 aa14.81□□□□□ -0.04
TOP3A-202ENST00000461127 ZNF416Q9BWM5 594 aa14.81□□□□□ -0.04
TOP3A-202ENST00000461127 G6PC2Q9NQR9 355 aa14.81□□□□□ -0.04
TOP3A-202ENST00000461127 EXOSC3Q9NQT5 275 aaKnown RBP14.81□□□□□ -0.04
TOP3A-202ENST00000461127 ZNF281Q9Y2X9 895 aa14.81□□□□□ -0.04
TOP3A-202ENST00000461127 RNF103-CHMP3A0A140T963 221 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms