RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 HLA-DOBP13765 273 aa14.19□□□□□ -0.14
CD28-203ENST00000458610 CDH2P19022 906 aaPredicted RBP14.19□□□□□ -0.14
CD28-203ENST00000458610 UBE2NP61088 152 aaKnown RBP14.19□□□□□ -0.14
CD28-203ENST00000458610 ROR2Q01974 943 aaKnown RBP14.19□□□□□ -0.14
CD28-203ENST00000458610 TAF11Q15544 211 aa14.19□□□□□ -0.14
CD28-203ENST00000458610 ACKR1Q16570 336 aa14.19□□□□□ -0.14
CD28-203ENST00000458610 MTX3Q5HYI7 312 aa14.19□□□□□ -0.14
CD28-203ENST00000458610 ANKRD16Q6P6B7 361 aa14.19□□□□□ -0.14
CD28-203ENST00000458610 TMEM108Q6UXF1 575 aa14.19□□□□□ -0.14
CD28-203ENST00000458610 ZNF704Q6ZNC4 412 aaPredicted RBP14.19□□□□□ -0.14
CD28-203ENST00000458610 C20orf204Q6ZNR8 217 aa14.19□□□□□ -0.14
CD28-203ENST00000458610 SLC35D2Q76EJ3 337 aa14.19□□□□□ -0.14
CD28-203ENST00000458610 SLC46A3Q7Z3Q1 461 aa14.19□□□□□ -0.14
CD28-203ENST00000458610 CCDC36Q8IYA8 594 aa14.19□□□□□ -0.14
CD28-203ENST00000458610 C20orf196Q8IYI0 205 aa14.19□□□□□ -0.14
CD28-203ENST00000458610 DEPDC4Q8N2C3 294 aa14.19□□□□□ -0.14
CD28-203ENST00000458610 LRRC17Q8N6Y2 441 aa14.19□□□□□ -0.14
CD28-203ENST00000458610 OR52N5Q8NH56 324 aa14.19□□□□□ -0.14
CD28-203ENST00000458610 OR6X1Q8NH79 312 aa14.19□□□□□ -0.14
CD28-203ENST00000458610 PFN4Q8NHR9 129 aa14.19□□□□□ -0.14
CD28-203ENST00000458610 MAGEE2Q8TD90 523 aaPredicted RBP14.19□□□□□ -0.14
CD28-203ENST00000458610 PIGTQ969N2 578 aa14.19□□□□□ -0.14
CD28-203ENST00000458610 BPIFA2Q96DR5 249 aa14.19□□□□□ -0.14
CD28-203ENST00000458610 NDEL1Q9GZM8 345 aa14.19□□□□□ -0.14
CD28-203ENST00000458610 NMNAT1Q9HAN9 279 aaPredicted RBP14.19□□□□□ -0.14
CD28-203ENST00000458610 ACTR3BQ9P1U1 418 aa14.19□□□□□ -0.14
CD28-203ENST00000458610 RHCGQ9UBD6 479 aa14.19□□□□□ -0.14
CD28-203ENST00000458610 RNF115Q9Y4L5 304 aa14.19□□□□□ -0.14
CD28-203ENST00000458610 SLC25A15Q9Y619 301 aa14.19□□□□□ -0.14
CD28-203ENST00000458610 FREM1Q5H8C1 2179 aa14.19□□□□□ -0.14
CD28-203ENST00000458610 CRYBG3Q68DQ2 2970 aa14.19□□□□□ -0.14
CD28-203ENST00000458610 MAST4O15021 2626 aa14.18□□□□□ -0.14
CD28-203ENST00000458610 A0A1W2PRQ8 180 aa14.18□□□□□ -0.14
CD28-203ENST00000458610 J3KTA2 159 aa14.18□□□□□ -0.14
CD28-203ENST00000458610 M0R3G1 203 aa14.18□□□□□ -0.14
CD28-203ENST00000458610 FFAR1O14842 300 aa14.18□□□□□ -0.14
CD28-203ENST00000458610 ENTPD5O75356 428 aa14.18□□□□□ -0.14
CD28-203ENST00000458610 T-ENOLP0DO92 83 aa14.18□□□□□ -0.14
CD28-203ENST00000458610 IFNGR1P15260 489 aa14.18□□□□□ -0.14
CD28-203ENST00000458610 PTAFRP25105 342 aa14.18□□□□□ -0.14
CD28-203ENST00000458610 LOXP28300 417 aaPredicted RBP14.18□□□□□ -0.14
CD28-203ENST00000458610 MSX2P35548 267 aaPredicted RBP14.18□□□□□ -0.14
CD28-203ENST00000458610 DAP3P51398 398 aaKnown RBP14.18□□□□□ -0.14
CD28-203ENST00000458610 FOXG1P55316 489 aaPredicted RBP14.18□□□□□ -0.14
CD28-203ENST00000458610 BIDP55957 195 aa14.18□□□□□ -0.14
CD28-203ENST00000458610 PRKCDQ05655 676 aa14.18□□□□□ -0.14
CD28-203ENST00000458610 DGCR6Q14129 220 aa14.18□□□□□ -0.14
CD28-203ENST00000458610 ADAM5Q6NVV9 412 aa14.18□□□□□ -0.14
CD28-203ENST00000458610 NHLRC1Q6VVB1 395 aa14.18□□□□□ -0.14
CD28-203ENST00000458610 RINLQ6ZS11 566 aa14.18□□□□□ -0.14
CD28-203ENST00000458610 MBOAT2Q6ZWT7 520 aa14.18□□□□□ -0.14
CD28-203ENST00000458610 NRMQ8IXM6 262 aa14.18□□□□□ -0.14
CD28-203ENST00000458610 TMEM123Q8N131 208 aa14.18□□□□□ -0.14
CD28-203ENST00000458610 OR1K1Q8NGR3 316 aa14.18□□□□□ -0.14
CD28-203ENST00000458610 NRGNQ92686 78 aa14.18□□□□□ -0.14
CD28-203ENST00000458610 MBD6Q96DN6 1003 aa14.18□□□□□ -0.14
CD28-203ENST00000458610 TXNDC15Q96J42 360 aa14.18□□□□□ -0.14
CD28-203ENST00000458610 ALKBH3Q96Q83 286 aaPredicted RBP14.18□□□□□ -0.14
CD28-203ENST00000458610 ZNF347Q96SE7 839 aa14.18□□□□□ -0.14
CD28-203ENST00000458610 PIP5K1AQ99755 562 aa14.18□□□□□ -0.14
CD28-203ENST00000458610 TMEM204Q9BSN7 226 aa14.18□□□□□ -0.14
CD28-203ENST00000458610 EMC6Q9BV81 110 aa14.18□□□□□ -0.14
CD28-203ENST00000458610 CRLF2Q9HC73 371 aa14.18□□□□□ -0.14
CD28-203ENST00000458610 GPR35Q9HC97 309 aa14.18□□□□□ -0.14
CD28-203ENST00000458610 INIPQ9NRY2 104 aa14.18□□□□□ -0.14
CD28-203ENST00000458610 C20orf141Q9NUB4 165 aa14.18□□□□□ -0.14
CD28-203ENST00000458610 MED29Q9NX70 200 aa14.18□□□□□ -0.14
CD28-203ENST00000458610 NDUFAF4Q9P032 175 aa14.18□□□□□ -0.14
CD28-203ENST00000458610 TMEM5Q9Y2B1 443 aa14.18□□□□□ -0.14
CD28-203ENST00000458610 PLEKHA6Q9Y2H5 1048 aa14.18□□□□□ -0.14
CD28-203ENST00000458610 EFCAB9A8MZ26 197 aa14.17□□□□□ -0.14
CD28-203ENST00000458610 CENPBD1B2RD01 187 aa14.17□□□□□ -0.14
CD28-203ENST00000458610 MCIDASD6RGH6 385 aa14.17□□□□□ -0.14
CD28-203ENST00000458610 CLOCKO15516 846 aa14.17□□□□□ -0.14
CD28-203ENST00000458610 TMCC2O75069 709 aa14.17□□□□□ -0.14
CD28-203ENST00000458610 SAGP10523 405 aaPredicted RBP14.17□□□□□ -0.14
CD28-203ENST00000458610 CSNK1A1P48729 337 aa14.17□□□□□ -0.14
CD28-203ENST00000458610 SLC9A3P48764 834 aa14.17□□□□□ -0.14
CD28-203ENST00000458610 IST1P53990 364 aa14.17□□□□□ -0.14
CD28-203ENST00000458610 RPL18Q07020 188 aaKnown RBP14.17□□□□□ -0.14
CD28-203ENST00000458610 TRIM25Q14258 630 aaKnown RBP14.17□□□□□ -0.14
CD28-203ENST00000458610 TBRG1Q3YBR2 411 aa14.17□□□□□ -0.14
CD28-203ENST00000458610 CARD17Q5XLA6 110 aa14.17□□□□□ -0.14
CD28-203ENST00000458610 DHFR2Q86XF0 187 aa14.17□□□□□ -0.14
CD28-203ENST00000458610 WDR31Q8NA23 367 aa14.17□□□□□ -0.14
CD28-203ENST00000458610 BCL2L2Q92843 193 aaPredicted RBP14.17□□□□□ -0.14
CD28-203ENST00000458610 ZNF566Q969W8 418 aa14.17□□□□□ -0.14
CD28-203ENST00000458610 SLC25A44Q96H78 314 aaPredicted RBP14.17□□□□□ -0.14
CD28-203ENST00000458610 C7orf34Q96L11 122 aa14.17□□□□□ -0.14
CD28-203ENST00000458610 HS3ST6Q96QI5 342 aa14.17□□□□□ -0.14
CD28-203ENST00000458610 LIME1Q9H400 295 aa14.17□□□□□ -0.14
CD28-203ENST00000458610 UBTD1Q9HAC8 227 aa14.17□□□□□ -0.14
CD28-203ENST00000458610 TAS2R1Q9NYW7 299 aa14.17□□□□□ -0.14
CD28-203ENST00000458610 POFUT2Q9Y2G5 429 aa14.17□□□□□ -0.14
CD28-203ENST00000458610 CREBBPQ92793 2442 aa14.16□□□□□ -0.14
CD28-203ENST00000458610 A0A087WUU8 490 aa14.16□□□□□ -0.14
CD28-203ENST00000458610 DPRXA6NFQ7 191 aa14.16□□□□□ -0.14
CD28-203ENST00000458610 ZNF99A8MXY4 864 aaPredicted RBP14.16□□□□□ -0.14
CD28-203ENST00000458610 hCG_2039718K7EN88 272 aa14.16□□□□□ -0.14
CD28-203ENST00000458610 PRSS23O95084 383 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms