RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 C1QTNF2Q9BXJ5 285 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 HDAC8Q9BY41 377 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 PRO1933Q9H354 126 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 CAPN10Q9HC96 672 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 A4GALTQ9NPC4 353 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 IL26Q9NPH9 171 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 CACFD1Q9UGQ2 172 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 NAGKQ9UJ70 344 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 SLC22A14Q9Y267 594 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 STYXL1Q9Y6J8 313 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 ABCA3Q99758 1704 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 LOC100289279A0A1B0GTE1 492 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 DSCR3O14972 297 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 TBL1XO60907 577 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 LY86O95711 162 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 NUDT3O95989 172 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 ALDH1A1P00352 501 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 HLA-DQB2P05538 268 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 GP1BAP07359 652 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 HCKP08631 526 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 HIST1H1BP16401 226 aaKnown RBP2.05□□□□□ -2.08
USP53-202ENST00000450251 ZNF823P16415 610 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 ADRA2CP18825 462 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 TNFSF4P23510 183 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 C21orf33P30042 268 aaPredicted RBP2.05□□□□□ -2.08
USP53-202ENST00000450251 OR1E1P30953 314 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 TIA1P31483 386 aaKnown RBP eCLIP2.05□□□□□ -2.08
USP53-202ENST00000450251 SFTPDP35247 375 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 PPM1AP35813 382 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 AHRP35869 848 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 CRKLP46109 303 aaKnown RBP2.05□□□□□ -2.08
USP53-202ENST00000450251 SLC6A8P48029 635 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 PXNP49023 591 aaPredicted RBP2.05□□□□□ -2.08
USP53-202ENST00000450251 RPIAP49247 311 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 SULT1A1P50225 295 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 CCR8P51685 355 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 DIO3P55073 304 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 BACE1P56817 501 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 PIGPP57054 158 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 PPP1CBP62140 327 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 TSPAN31Q12999 210 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 SPP2Q13103 211 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 NFATC2Q13469 925 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 INPP5JQ15735 1006 aaPredicted RBP2.05□□□□□ -2.08
USP53-202ENST00000450251 MAJINQ3KP22 176 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 TMEM35AQ53FP2 167 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 XKR7Q5GH72 579 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 PSMG4Q5JS54 123 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 LRRC73Q5JTD7 316 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 PHYHD1Q5SRE7 291 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 NCR3LG1Q68D85 454 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 NOXRED1Q6NXP6 359 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 VITQ6UXI7 678 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 C12orf54Q6X4T0 127 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 SLC24A5Q71RS6 500 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 SCN4BQ8IWT1 228 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 SIDT2Q8NBJ9 832 aaKnown RBP2.05□□□□□ -2.08
USP53-202ENST00000450251 OR5B17Q8NGF7 314 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 OR1S2Q8NGQ3 325 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 OR4K13Q8NH42 304 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 LGALS14Q8TCE9 139 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 ASB11Q8WXH4 323 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 GCDHQ92947 438 aaPredicted RBP2.05□□□□□ -2.08
USP53-202ENST00000450251 FAM163AQ96GL9 167 aaPredicted RBP2.05□□□□□ -2.08
USP53-202ENST00000450251 MASTLQ96GX5 879 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 GMPPAQ96IJ6 420 aaPredicted RBP2.05□□□□□ -2.08
USP53-202ENST00000450251 SHDQ96IW2 340 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 C2orf50Q96LR7 162 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 MS4A10Q96PG2 267 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 HHIPQ96QV1 700 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 HBEGFQ99075 208 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 ARHGDIGQ99819 225 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 CITED2Q99967 270 aaPredicted RBP2.05□□□□□ -2.08
USP53-202ENST00000450251 NTMT1Q9BV86 223 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 SGPP1Q9BX95 441 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 C1QTNF3Q9BXJ4 246 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 FGFBP2Q9BYJ0 223 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 WNT5BQ9H1J7 359 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 MAGEH1Q9H213 219 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 OR51B6Q9H340 312 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 ASB8Q9H765 288 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 IL21RQ9HBE5 538 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 FAM206AQ9NX38 181 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 HSPB7Q9UBY9 170 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 IL19Q9UHD0 177 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 MOKQ9UQ07 419 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 CSAG2Q9Y5P2 127 aa2.05□□□□□ -2.08
USP53-202ENST00000450251 DNMT3AQ9Y6K1 912 aaPredicted RBP2.05□□□□□ -2.08
USP53-202ENST00000450251 TRAV39A0A0B4J263 110 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 ZCWPW2A0A1B0GU75 182 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 M0R082 166 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 SIRPB1O00241 398 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 TP53I11O14683 189 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 NRP1O14786 923 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 DLEU1O43261 78 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 TBX19O60806 448 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 ENDOD1O94919 500 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 SIX3O95343 332 aaPredicted RBP2.04□□□□□ -2.08
USP53-202ENST00000450251 SOX14O95416 240 aa2.04□□□□□ -2.08
USP53-202ENST00000450251 F7P08709 466 aaPredicted RBP2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms