RNA–Protein interactions for RNA: ENST00000434472.6

CD44-210, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,634 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-210ENST00000434472 LDOC1O95751 146 aaPredicted RBP9.47□□□□□ -0.89
CD44-210ENST00000434472 DDAH2O95865 285 aa9.47□□□□□ -0.89
CD44-210ENST00000434472 BGLAPP02818 100 aa9.47□□□□□ -0.89
CD44-210ENST00000434472 OR8G3PP0DMU2 310 aa9.47□□□□□ -0.89
CD44-210ENST00000434472 PRKCAP17252 672 aa9.47□□□□□ -0.89
CD44-210ENST00000434472 FBLP22087 321 aaKnown RBP9.47□□□□□ -0.89
CD44-210ENST00000434472 GIFP27352 417 aa9.47□□□□□ -0.89
CD44-210ENST00000434472 EVI2BP34910 448 aa9.47□□□□□ -0.89
CD44-210ENST00000434472 GDNFP39905 211 aa9.47□□□□□ -0.89
CD44-210ENST00000434472 CCR9P51686 369 aa9.47□□□□□ -0.89
CD44-210ENST00000434472 NANOS3P60323 173 aaKnown RBP9.47□□□□□ -0.89
CD44-210ENST00000434472 HSD11B2P80365 405 aa9.47□□□□□ -0.89
CD44-210ENST00000434472 EGR4Q05215 589 aa9.47□□□□□ -0.89
CD44-210ENST00000434472 Q5BKY6 102 aa9.47□□□□□ -0.89
CD44-210ENST00000434472 ELFN2Q5R3F8 820 aa9.47□□□□□ -0.89
CD44-210ENST00000434472 HES5Q5TA89 166 aa9.47□□□□□ -0.89
CD44-210ENST00000434472 LIPNQ5VXI9 398 aa9.47□□□□□ -0.89
CD44-210ENST00000434472 FAM205BPQ63HN1 556 aa9.47□□□□□ -0.89
CD44-210ENST00000434472 FAM199XQ6PEV8 388 aaPredicted RBP9.47□□□□□ -0.89
CD44-210ENST00000434472 CBLN3Q6UW01 205 aa9.47□□□□□ -0.89
CD44-210ENST00000434472 C5orf46Q6UWT4 87 aa9.47□□□□□ -0.89
CD44-210ENST00000434472 ZNF782Q6ZMW2 699 aaPredicted RBP9.47□□□□□ -0.89
CD44-210ENST00000434472 LINGO2Q7L985 606 aa9.47□□□□□ -0.89
CD44-210ENST00000434472 SLC29A4Q7RTT9 530 aa9.47□□□□□ -0.89
CD44-210ENST00000434472 FGD2Q7Z6J4 655 aa9.47□□□□□ -0.89
CD44-210ENST00000434472 SYT9Q86SS6 491 aa9.47□□□□□ -0.89
CD44-210ENST00000434472 ZNF433Q8N7K0 673 aaPredicted RBP9.47□□□□□ -0.89
CD44-210ENST00000434472 ZNF511Q8NB15 262 aa9.47□□□□□ -0.89
CD44-210ENST00000434472 ZNF417Q8TAU3 575 aa9.47□□□□□ -0.89
CD44-210ENST00000434472 FCAMRQ8WWV6 532 aa9.47□□□□□ -0.89
CD44-210ENST00000434472 ASB17Q8WXJ9 295 aa9.47□□□□□ -0.89
CD44-210ENST00000434472 NSMAFQ92636 917 aa9.47□□□□□ -0.89
CD44-210ENST00000434472 PHF21AQ96BD5 680 aa9.47□□□□□ -0.89
CD44-210ENST00000434472 KTI12Q96EK9 354 aaPredicted RBP9.47□□□□□ -0.89
CD44-210ENST00000434472 MAP6Q96JE9 813 aa9.47□□□□□ -0.89
CD44-210ENST00000434472 ADOQ96SZ5 270 aa9.47□□□□□ -0.89
CD44-210ENST00000434472 COPS7AQ9UBW8 275 aa9.47□□□□□ -0.89
CD44-210ENST00000434472 MRM2Q9UI43 246 aaKnown RBP9.47□□□□□ -0.89
CD44-210ENST00000434472 ZNF346Q9UL40 294 aaKnown RBP9.47□□□□□ -0.89
CD44-210ENST00000434472 MTCH2Q9Y6C9 303 aa9.47□□□□□ -0.89
CD44-210ENST00000434472 A0A0B4J203 849 aa9.46□□□□□ -0.89
CD44-210ENST00000434472 TMEM212A6NML5 194 aa9.46□□□□□ -0.89
CD44-210ENST00000434472 FAM171A2A8MVW0 826 aa9.46□□□□□ -0.89
CD44-210ENST00000434472 ALG1L2C9J202 215 aa9.46□□□□□ -0.89
CD44-210ENST00000434472 H3BMH7 237 aa9.46□□□□□ -0.89
CD44-210ENST00000434472 XKRYO14609 159 aa9.46□□□□□ -0.89
CD44-210ENST00000434472 HCRTR2O43614 444 aa9.46□□□□□ -0.89
CD44-210ENST00000434472 NDUFB5O43674 189 aa9.46□□□□□ -0.89
CD44-210ENST00000434472 TSPAN2O60636 221 aa9.46□□□□□ -0.89
CD44-210ENST00000434472 ICOSLGO75144 302 aa9.46□□□□□ -0.89
CD44-210ENST00000434472 ZNF254O75437 659 aa9.46□□□□□ -0.89
CD44-210ENST00000434472 SLC25A12O75746 678 aa9.46□□□□□ -0.89
CD44-210ENST00000434472 ABHD16AO95870 558 aa9.46□□□□□ -0.89
CD44-210ENST00000434472 F13BP05160 661 aa9.46□□□□□ -0.89
CD44-210ENST00000434472 MAOBP27338 520 aa9.46□□□□□ -0.89
CD44-210ENST00000434472 ITPKBP27987 946 aa9.46□□□□□ -0.89
CD44-210ENST00000434472 GRPRP30550 384 aa9.46□□□□□ -0.89
CD44-210ENST00000434472 ART1P52961 327 aa9.46□□□□□ -0.89
CD44-210ENST00000434472 PNLIPRP2P54317 469 aa9.46□□□□□ -0.89
CD44-210ENST00000434472 NXPH1P58417 271 aa9.46□□□□□ -0.89
CD44-210ENST00000434472 ZNF117Q03924 483 aa9.46□□□□□ -0.89
CD44-210ENST00000434472 RASGEF1BQ0VAM2 473 aa9.46□□□□□ -0.89
CD44-210ENST00000434472 EBPQ15125 230 aaKnown RBP9.46□□□□□ -0.89
CD44-210ENST00000434472 DEFB133Q30KQ1 61 aa9.46□□□□□ -0.89
CD44-210ENST00000434472 MESTQ5EB52 335 aa9.46□□□□□ -0.89
CD44-210ENST00000434472 RNASE12Q5GAN4 147 aaKnown RBP9.46□□□□□ -0.89
CD44-210ENST00000434472 APOOLQ6UXV4 268 aa9.46□□□□□ -0.89
CD44-210ENST00000434472 FCRLAQ7L513 359 aa9.46□□□□□ -0.89
CD44-210ENST00000434472 KMT5CQ86Y97 462 aa9.46□□□□□ -0.89
CD44-210ENST00000434472 PLXDC1Q8IUK5 500 aa9.46□□□□□ -0.89
CD44-210ENST00000434472 FAM160A2Q8N612 972 aaPredicted RBP9.46□□□□□ -0.89
CD44-210ENST00000434472 ZNF321PQ8N8H1 164 aa9.46□□□□□ -0.89
CD44-210ENST00000434472 OR6N2Q8NGY6 317 aa9.46□□□□□ -0.89
CD44-210ENST00000434472 HSD17B8Q92506 261 aa9.46□□□□□ -0.89
CD44-210ENST00000434472 RGP1Q92546 391 aaPredicted RBP9.46□□□□□ -0.89
CD44-210ENST00000434472 TSLPQ969D9 159 aa9.46□□□□□ -0.89
CD44-210ENST00000434472 TAAR8Q969N4 342 aa9.46□□□□□ -0.89
CD44-210ENST00000434472 RNF166Q96A37 237 aaPredicted RBP9.46□□□□□ -0.89
CD44-210ENST00000434472 GAL3ST4Q96RP7 486 aa9.46□□□□□ -0.89
CD44-210ENST00000434472 INTS14Q96SY0 518 aa9.46□□□□□ -0.89
CD44-210ENST00000434472 GFI1Q99684 422 aa9.46□□□□□ -0.89
CD44-210ENST00000434472 NUDT9Q9BW91 350 aa9.46□□□□□ -0.89
CD44-210ENST00000434472 TBL1XR1Q9BZK7 514 aa9.46□□□□□ -0.89
CD44-210ENST00000434472 SLC25A18Q9H1K4 315 aa9.46□□□□□ -0.89
CD44-210ENST00000434472 ZNF576Q9H609 170 aa9.46□□□□□ -0.89
CD44-210ENST00000434472 ZNF304Q9HCX3 659 aa9.46□□□□□ -0.89
CD44-210ENST00000434472 DIABLOQ9NR28 239 aa9.46□□□□□ -0.89
CD44-210ENST00000434472 ZNF222Q9UK12 451 aa9.46□□□□□ -0.89
CD44-210ENST00000434472 IKZF2Q9UKS7 526 aa9.46□□□□□ -0.89
CD44-210ENST00000434472 MRPS17Q9Y2R5 130 aaKnown RBP9.46□□□□□ -0.89
CD44-210ENST00000434472 FKBP7Q9Y680 259 aa9.46□□□□□ -0.89
CD44-210ENST00000434472 TRBV5-7A0A0A0MS05 114 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 IDSB3KWA1 339 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 AGRPO00253 132 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 DUX1O43812 170 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 RPP14O95059 124 aaKnown RBP9.45□□□□□ -0.9
CD44-210ENST00000434472 MT-ND4P03905 459 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 ALOX5APP20292 161 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 MST1P26927 711 aa9.45□□□□□ -0.9
CD44-210ENST00000434472 OR1D4P47884 311 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms