RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 UAP1Q16222 522 aaPredicted RBP3.48□□□□□ -1.85
HMGB3-203ENST00000430118 TRIM16LQ309B1 348 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 LINC00303Q3SY05 128 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 ACSBG2Q5FVE4 666 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 BRMS1LQ5PSV4 323 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 LIPKQ5VXJ0 399 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 RHBDD2Q6NTF9 364 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 SLC39A4Q6P5W5 647 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 XKRXQ6PP77 449 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 DPY19L2P2Q6ZN68 376 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 SH2D5Q6ZV89 423 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 UTS2BQ765I0 119 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 TAS2R42Q7RTR8 314 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 GPBP1Q86WP2 473 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 FAM131BQ86XD5 332 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 TMEM25Q86YD3 366 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 CBWD2Q8IUF1 395 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 SLC34A3Q8N130 599 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 BANPQ8N9N5 519 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 CATSPER1Q8NEC5 780 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 KBTBD8Q8NFY9 601 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 OR6C4Q8NGE1 309 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 OR52K1Q8NGK4 314 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 OR8K3Q8NH51 312 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 GPR148Q8TDV2 347 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 LRRC15Q8TF66 581 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 SCARB1Q8WTV0 552 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 NAT6Q93015 286 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 MYDGFQ969H8 173 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 TMEM159Q96B96 161 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 CNDP1Q96KN2 507 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 C2orf48Q96LS8 159 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 ACCSQ96QU6 501 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 SLC29A1Q99808 456 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 C19orf43Q9BQ61 176 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 ZNF717Q9BY31 904 aaPredicted RBP3.48□□□□□ -1.85
HMGB3-203ENST00000430118 HIPK2Q9H2X6 1198 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 FBXO44Q9H4M3 255 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 SYNDIG1Q9H7V2 258 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 ZNF556Q9HAH1 456 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 ZNF71Q9NQZ8 489 aaPredicted RBP3.48□□□□□ -1.85
HMGB3-203ENST00000430118 FGFR1OP2Q9NVK5 253 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 DDX18Q9NVP1 670 aaKnown RBP3.48□□□□□ -1.85
HMGB3-203ENST00000430118 ELOVL2Q9NXB9 296 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 GDAP2Q9NXN4 497 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 TAS2R1Q9NYW7 299 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 RNF7Q9UBF6 113 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 P2RX2Q9UBL9 471 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 PRELID3BQ9Y3B1 194 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 FBN2P35556 2912 aa3.48□□□□□ -1.85
HMGB3-203ENST00000430118 GOLGA4Q13439 2230 aaKnown RBP3.48□□□□□ -1.85
HMGB3-203ENST00000430118 TMEM131Q92545 1883 aa3.47□□□□□ -1.85
HMGB3-203ENST00000430118 C2CD3Q4AC94 2353 aa3.47□□□□□ -1.85
HMGB3-203ENST00000430118 DOPEY1Q5JWR5 2465 aa3.47□□□□□ -1.85
HMGB3-203ENST00000430118 CREBBPQ92793 2442 aa3.47□□□□□ -1.85
HMGB3-203ENST00000430118 LOC390937A0A1W2PQ73 354 aa3.47□□□□□ -1.85
HMGB3-203ENST00000430118 ZNF98A6NK75 572 aa3.47□□□□□ -1.85
HMGB3-203ENST00000430118 A8MX80 341 aa3.47□□□□□ -1.85
HMGB3-203ENST00000430118 WASH3PC4AMC7 463 aa3.47□□□□□ -1.85
HMGB3-203ENST00000430118 ATP6V1G2-DDX39BF2Z307 99 aa3.47□□□□□ -1.85
HMGB3-203ENST00000430118 FAM72CH0Y354 149 aa3.47□□□□□ -1.85
HMGB3-203ENST00000430118 PRAMEF26H0Y7S4 382 aa3.47□□□□□ -1.85
HMGB3-203ENST00000430118 BLOC1S5-TXNDC5H3BN57 136 aa3.47□□□□□ -1.85
HMGB3-203ENST00000430118 POLR2DO15514 142 aaKnown RBP3.47□□□□□ -1.85
HMGB3-203ENST00000430118 NOS1APO75052 506 aaPredicted RBP3.47□□□□□ -1.85
HMGB3-203ENST00000430118 ENTPD5O75356 428 aa3.47□□□□□ -1.85
HMGB3-203ENST00000430118 ZNF821O75541 412 aaPredicted RBP3.47□□□□□ -1.85
HMGB3-203ENST00000430118 CRTAPO75718 401 aaPredicted RBP3.47□□□□□ -1.85
HMGB3-203ENST00000430118 PIGRP01833 764 aa3.47□□□□□ -1.85
HMGB3-203ENST00000430118 APOC1P02654 83 aa3.47□□□□□ -1.85
HMGB3-203ENST00000430118 SHBGP04278 402 aa3.47□□□□□ -1.85
HMGB3-203ENST00000430118 GYPCP04921 128 aa3.47□□□□□ -1.85
HMGB3-203ENST00000430118 IL6P05231 212 aa3.47□□□□□ -1.85
HMGB3-203ENST00000430118 IGHV4-34P06331 123 aa3.47□□□□□ -1.85
HMGB3-203ENST00000430118 TFPTP0C1Z6 253 aa3.47□□□□□ -1.85
HMGB3-203ENST00000430118 TRAPPC2P0DI81 140 aa3.47□□□□□ -1.85
HMGB3-203ENST00000430118 TRAPPC2BP0DI82 140 aa3.47□□□□□ -1.85
HMGB3-203ENST00000430118 CCDC130P13994 396 aa3.47□□□□□ -1.85
HMGB3-203ENST00000430118 IMPDH1P20839 514 aa3.47□□□□□ -1.85
HMGB3-203ENST00000430118 CMA1P23946 247 aa3.47□□□□□ -1.85
HMGB3-203ENST00000430118 RCVRNP35243 200 aa3.47□□□□□ -1.85
HMGB3-203ENST00000430118 TSFMP43897 325 aaKnown RBP3.47□□□□□ -1.85
HMGB3-203ENST00000430118 ATP5OP48047 213 aa3.47□□□□□ -1.85
HMGB3-203ENST00000430118 LEPRP48357 1165 aaKnown RBP3.47□□□□□ -1.85
HMGB3-203ENST00000430118 CRYBA2P53672 197 aa3.47□□□□□ -1.85
HMGB3-203ENST00000430118 PSMD4P55036 377 aaKnown RBP3.47□□□□□ -1.85
HMGB3-203ENST00000430118 HADHBP55084 474 aaKnown RBP3.47□□□□□ -1.85
HMGB3-203ENST00000430118 FOXG1P55316 489 aaPredicted RBP3.47□□□□□ -1.85
HMGB3-203ENST00000430118 RAB4BP61018 213 aa3.47□□□□□ -1.85
HMGB3-203ENST00000430118 TSPAN5P62079 268 aa3.47□□□□□ -1.85
HMGB3-203ENST00000430118 TFAMQ00059 246 aaKnown RBP3.47□□□□□ -1.85
HMGB3-203ENST00000430118 OTUD4Q01804 1114 aaKnown RBP3.47□□□□□ -1.85
HMGB3-203ENST00000430118 SNTB2Q13425 540 aaKnown RBP3.47□□□□□ -1.85
HMGB3-203ENST00000430118 CDK10Q15131 360 aa3.47□□□□□ -1.85
HMGB3-203ENST00000430118 IGFBP7Q16270 282 aa3.47□□□□□ -1.85
HMGB3-203ENST00000430118 PDK4Q16654 411 aa3.47□□□□□ -1.85
HMGB3-203ENST00000430118 ZNF672Q499Z4 452 aaPredicted RBP3.47□□□□□ -1.85
HMGB3-203ENST00000430118 KCTD21Q4G0X4 260 aa3.47□□□□□ -1.85
HMGB3-203ENST00000430118 TEX30Q5JUR7 227 aa3.47□□□□□ -1.85
HMGB3-203ENST00000430118 FAM72AQ5TYM5 149 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms