RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 STT3BQ8TCJ2 826 aa2.53□□□□□ -2.01
CHD9-202ENST00000398510 GLYATL2Q8WU03 294 aa2.53□□□□□ -2.01
CHD9-202ENST00000398510 RAB1CQ92928 201 aa2.53□□□□□ -2.01
CHD9-202ENST00000398510 BPIFA2Q96DR5 249 aa2.53□□□□□ -2.01
CHD9-202ENST00000398510 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.53□□□□□ -2.01
CHD9-202ENST00000398510 ZDHHC2Q9UIJ5 367 aa2.53□□□□□ -2.01
CHD9-202ENST00000398510 PYCARDQ9ULZ3 195 aa2.53□□□□□ -2.01
CHD9-202ENST00000398510 SH2B3Q9UQQ2 575 aa2.53□□□□□ -2.01
CHD9-202ENST00000398510 BTRCQ9Y297 605 aa2.53□□□□□ -2.01
CHD9-202ENST00000398510 HOXC11O43248 304 aaPredicted RBP2.52□□□□□ -2.01
CHD9-202ENST00000398510 MT-ND1P03886 318 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 IFI30P13284 250 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 ENGP17813 658 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 MYF6P23409 242 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 VEGFBP49765 207 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 RELAQ04206 551 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 AKR1C1Q04828 323 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 SRYQ05066 204 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 AADACL4Q5VUY2 407 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 HEPHL1Q6MZM0 1159 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 DEGS2Q6QHC5 323 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 GOLGA7Q7Z5G4 137 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 MEX3DQ86XN8 651 aaKnown RBP2.52□□□□□ -2.01
CHD9-202ENST00000398510 SLC35F3Q8IY50 421 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 TP53I13Q8NBR0 393 aaPredicted RBP2.52□□□□□ -2.01
CHD9-202ENST00000398510 ADAMTS19Q8TE59 1207 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 PINX1Q96BK5 328 aaKnown RBP2.52□□□□□ -2.01
CHD9-202ENST00000398510 ZBTB45Q96K62 511 aaPredicted RBP2.52□□□□□ -2.01
CHD9-202ENST00000398510 SMAD5Q99717 465 aaKnown RBP2.52□□□□□ -2.01
CHD9-202ENST00000398510 COMMD5Q9GZQ3 224 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 TAS2R3Q9NYW6 316 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 ARFGEF3Q5TH69 2177 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 DNAJC25-GNG10A0A024R161 153 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 ZNF785A8K8V0 405 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 H3BML4 177 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 CORTO00230 105 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 SULT1B1O43704 296 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 SULT1C4O75897 302 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 CTDNEP1O95476 244 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 LIPCP11150 499 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 SERPINA2P20848 420 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 DUSP1P28562 367 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 DSCR4P56555 118 aaPredicted RBP2.52□□□□□ -2.01
CHD9-202ENST00000398510 CLDN8P56748 225 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 UBE2MP61081 183 aaKnown RBP2.52□□□□□ -2.01
CHD9-202ENST00000398510 ZNF616Q08AN1 781 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 IGFBP7Q16270 282 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 BCL7AQ4VC05 210 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 CLEC12AQ5QGZ9 265 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 PLXDC2Q6UX71 529 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 HIST2H3AQ71DI3 136 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 OR13C9Q8NGT0 318 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 OR51Q1Q8NH59 317 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 CYB5D2Q8WUJ1 264 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 MRPS24Q96EL2 167 aaKnown RBP2.52□□□□□ -2.01
CHD9-202ENST00000398510 PCDHAC1Q9H158 963 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 VNN3Q9NY84 501 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 ZDBF2Q9HCK1 2354 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 TRIOBPQ9H2D6 2365 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 FAM159BA6NKW6 160 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 ZNF732B4DXR9 585 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 B4GALT5O43286 388 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 CREG1O75629 220 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 SNAI1O95863 264 aaPredicted RBP2.52□□□□□ -2.01
CHD9-202ENST00000398510 MT-ND4P03905 459 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 HSD17B1P14061 328 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 PRSS3P35030 304 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 KCNJ3P48549 501 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 MRPL19P49406 292 aaKnown RBP2.52□□□□□ -2.01
CHD9-202ENST00000398510 SKP2Q13309 424 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 GK2Q14410 553 aaPredicted RBP2.52□□□□□ -2.01
CHD9-202ENST00000398510 CLEC2AQ6UVW9 174 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 PRSS35Q8N3Z0 413 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 EIF4E3Q8N5X7 224 aaKnown RBP2.52□□□□□ -2.01
CHD9-202ENST00000398510 SAMD12Q8N8I0 201 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 MFSD9Q8NBP5 474 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 PLPP5Q8NEB5 264 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 OR1L1Q8NH94 360 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 S100PBPQ96BU1 408 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 TNFRSF13CQ96RJ3 184 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 NIPSNAP3BQ9BS92 247 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 ULBP2Q9BZM5 246 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 B3GNT3Q9Y2A9 372 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 TRAV36DV7A0A075B6V5 113 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 A8MT66 165 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 J3QW42 95 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 M0QZK8 103 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 ANGPTL7O43827 346 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 CBR3O75828 277 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 ACTL6AO96019 429 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 UNGP13051 313 aaPredicted RBP2.52□□□□□ -2.01
CHD9-202ENST00000398510 ELK1P19419 428 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 CASP7P55210 303 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 RAB8AP61006 207 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 RPS24P62847 133 aaKnown RBP2.52□□□□□ -2.01
CHD9-202ENST00000398510 POU3F1Q03052 451 aaPredicted RBP2.52□□□□□ -2.01
CHD9-202ENST00000398510 CDHR3Q6ZTQ4 885 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 DOLPP1Q86YN1 238 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 SLC35B2Q8TB61 432 aa2.52□□□□□ -2.01
CHD9-202ENST00000398510 SLC35E1Q96K37 410 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms