RNA–Protein interactions for RNA: ENST00000393824.7

CUX1-204, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-204ENST00000393824 PUSL1Q8N0Z8 303 aaKnown RBP10.19□□□□□ -0.78
CUX1-204ENST00000393824 C12orf45Q8N5I9 185 aaPredicted RBP10.19□□□□□ -0.78
CUX1-204ENST00000393824 ZNF740Q8NDX6 193 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 DNAAF1Q8NEP3 725 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 LMX1AQ8TE12 382 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 DIO2Q92813 273 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 RAD51AP1Q96B01 352 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 NARS2Q96I59 477 aaKnown RBP10.19□□□□□ -0.78
CUX1-204ENST00000393824 ARHGDIGQ99819 225 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 MFFQ9GZY8 342 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 PIGMQ9H3S5 423 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 SYNPO2LQ9H987 977 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 TMEM131Q92545 1883 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 FREM2Q5SZK8 3169 aa10.19□□□□□ -0.78
CUX1-204ENST00000393824 UBE2QL1A1L167 161 aa10.18□□□□□ -0.78
CUX1-204ENST00000393824 FAM183AA6NL82 134 aa10.18□□□□□ -0.78
CUX1-204ENST00000393824 B4DGG1 531 aa10.18□□□□□ -0.78
CUX1-204ENST00000393824 F5H5P2 479 aa10.18□□□□□ -0.78
CUX1-204ENST00000393824 KHDRBS3O75525 346 aaKnown RBP10.18□□□□□ -0.78
CUX1-204ENST00000393824 GIMD1P0DJR0 217 aa10.18□□□□□ -0.78
CUX1-204ENST00000393824 ERGP11308 486 aa10.18□□□□□ -0.78
CUX1-204ENST00000393824 CTSEP14091 401 aa10.18□□□□□ -0.78
CUX1-204ENST00000393824 AHRP35869 848 aa10.18□□□□□ -0.78
CUX1-204ENST00000393824 PPP1CAP62136 330 aa10.18□□□□□ -0.78
CUX1-204ENST00000393824 MRPS10P82664 201 aaKnown RBP10.18□□□□□ -0.78
CUX1-204ENST00000393824 GPR18Q14330 331 aa10.18□□□□□ -0.78
CUX1-204ENST00000393824 CSRP2Q16527 193 aa10.18□□□□□ -0.78
CUX1-204ENST00000393824 DECR1Q16698 335 aa10.18□□□□□ -0.78
CUX1-204ENST00000393824 SWI5Q1ZZU3 235 aa10.18□□□□□ -0.78
CUX1-204ENST00000393824 SLC36A1Q7Z2H8 476 aa10.18□□□□□ -0.78
CUX1-204ENST00000393824 NUDT13Q86X67 352 aa10.18□□□□□ -0.78
CUX1-204ENST00000393824 SLC25A45Q8N413 288 aa10.18□□□□□ -0.78
CUX1-204ENST00000393824 OR4E2Q8NGC2 313 aa10.18□□□□□ -0.78
CUX1-204ENST00000393824 OR5M1Q8NGP8 315 aa10.18□□□□□ -0.78
CUX1-204ENST00000393824 SMAP2Q8WU79 429 aaPredicted RBP10.18□□□□□ -0.78
CUX1-204ENST00000393824 FCAMRQ8WWV6 532 aa10.18□□□□□ -0.78
CUX1-204ENST00000393824 ACOT11Q8WXI4 607 aaPredicted RBP10.18□□□□□ -0.78
CUX1-204ENST00000393824 GHSRQ92847 366 aa10.18□□□□□ -0.78
CUX1-204ENST00000393824 MOAP1Q96BY2 351 aa10.18□□□□□ -0.78
CUX1-204ENST00000393824 AIF1LQ9BQI0 150 aa10.18□□□□□ -0.78
CUX1-204ENST00000393824 PRDM9Q9NQV7 894 aa10.18□□□□□ -0.78
CUX1-204ENST00000393824 KLK11Q9UBX7 282 aa10.18□□□□□ -0.78
CUX1-204ENST00000393824 R4GN57 208 aa10.18□□□□□ -0.78
CUX1-204ENST00000393824 IGKV1-8A0A0C4DH67 115 aa10.18□□□□□ -0.78
CUX1-204ENST00000393824 DISC1C4P0D8 188 aa10.18□□□□□ -0.78
CUX1-204ENST00000393824 RAD1O60671 282 aa10.18□□□□□ -0.78
CUX1-204ENST00000393824 ARL6IP5O75915 188 aa10.18□□□□□ -0.78
CUX1-204ENST00000393824 TBX6O95947 436 aaPredicted RBP10.18□□□□□ -0.78
CUX1-204ENST00000393824 SFTPCP11686 197 aa10.18□□□□□ -0.78
CUX1-204ENST00000393824 NT5EP21589 574 aa10.18□□□□□ -0.78
CUX1-204ENST00000393824 BUD31P41223 144 aaPredicted RBP10.18□□□□□ -0.78
CUX1-204ENST00000393824 ART1P52961 327 aa10.18□□□□□ -0.78
CUX1-204ENST00000393824 ARHGAP19Q14CB8 494 aa10.18□□□□□ -0.78
CUX1-204ENST00000393824 OR7E24Q6IFN5 339 aa10.18□□□□□ -0.78
CUX1-204ENST00000393824 TCEAL6Q6IPX3 200 aa10.18□□□□□ -0.78
CUX1-204ENST00000393824 HEPHL1Q6MZM0 1159 aa10.18□□□□□ -0.78
CUX1-204ENST00000393824 PLBD1Q6P4A8 553 aa10.18□□□□□ -0.78
CUX1-204ENST00000393824 FAM199XQ6PEV8 388 aaPredicted RBP10.18□□□□□ -0.78
CUX1-204ENST00000393824 ARMC10Q8N2F6 343 aa10.18□□□□□ -0.78
CUX1-204ENST00000393824 OR5D16Q8NGK9 328 aa10.18□□□□□ -0.78
CUX1-204ENST00000393824 ZNF671Q8TAW3 534 aa10.18□□□□□ -0.78
CUX1-204ENST00000393824 LGALS14Q8TCE9 139 aa10.18□□□□□ -0.78
CUX1-204ENST00000393824 PMM1Q92871 262 aa10.18□□□□□ -0.78
CUX1-204ENST00000393824 TCEAL3Q969E4 200 aa10.18□□□□□ -0.78
CUX1-204ENST00000393824 TBX5Q99593 518 aa10.18□□□□□ -0.78
CUX1-204ENST00000393824 TSNAXQ99598 290 aaKnown RBP10.18□□□□□ -0.78
CUX1-204ENST00000393824 SEMA4GQ9NTN9 838 aa10.18□□□□□ -0.78
CUX1-204ENST00000393824 TAC3Q9UHF0 121 aa10.18□□□□□ -0.78
CUX1-204ENST00000393824 FBXO4Q9UKT5 387 aa10.18□□□□□ -0.78
CUX1-204ENST00000393824 TNRC6BQ9UPQ9 1833 aaKnown RBP10.18□□□□□ -0.78
CUX1-204ENST00000393824 DCHS1Q96JQ0 3298 aa10.18□□□□□ -0.78
CUX1-204ENST00000393824 ZFHX2Q9C0A1 2572 aaPredicted RBP10.17□□□□□ -0.78
CUX1-204ENST00000393824 TMEM218A2RU14 115 aa10.17□□□□□ -0.78
CUX1-204ENST00000393824 TMEM127O75204 238 aa10.17□□□□□ -0.78
CUX1-204ENST00000393824 EIF3GO75821 320 aaKnown RBP eCLIP10.17□□□□□ -0.78
CUX1-204ENST00000393824 ACAA1P09110 424 aaPredicted RBP10.17□□□□□ -0.78
CUX1-204ENST00000393824 UCHL1P09936 223 aa10.17□□□□□ -0.78
CUX1-204ENST00000393824 SMIM6P0DI80 62 aa10.17□□□□□ -0.78
CUX1-204ENST00000393824 ACVR1BP36896 505 aa10.17□□□□□ -0.78
CUX1-204ENST00000393824 NR0B1P51843 470 aaKnown RBP10.17□□□□□ -0.78
CUX1-204ENST00000393824 C2orf68Q2NKX9 166 aa10.17□□□□□ -0.78
CUX1-204ENST00000393824 ZNF425Q6IV72 752 aa10.17□□□□□ -0.78
CUX1-204ENST00000393824 TMEM88Q6PEY1 159 aa10.17□□□□□ -0.78
CUX1-204ENST00000393824 C17orf64Q86WR6 236 aa10.17□□□□□ -0.78
CUX1-204ENST00000393824 OR2AK2Q8NG84 335 aa10.17□□□□□ -0.78
CUX1-204ENST00000393824 OR10H4Q8NGA5 316 aa10.17□□□□□ -0.78
CUX1-204ENST00000393824 KISS1RQ969F8 398 aaPredicted RBP10.17□□□□□ -0.78
CUX1-204ENST00000393824 EXOSC8Q96B26 276 aaKnown RBP10.17□□□□□ -0.78
CUX1-204ENST00000393824 MRPL48Q96GC5 212 aaKnown RBP10.17□□□□□ -0.78
CUX1-204ENST00000393824 ZNF251Q9BRH9 671 aa10.17□□□□□ -0.78
CUX1-204ENST00000393824 PDCD10Q9BUL8 212 aa10.17□□□□□ -0.78
CUX1-204ENST00000393824 PCBD2Q9H0N5 130 aa10.17□□□□□ -0.78
CUX1-204ENST00000393824 UBQLN3Q9H347 655 aa10.17□□□□□ -0.78
CUX1-204ENST00000393824 CACYBPQ9HB71 228 aaKnown RBP10.17□□□□□ -0.78
CUX1-204ENST00000393824 PPP1R14DQ9NXH3 145 aa10.17□□□□□ -0.78
CUX1-204ENST00000393824 CALML5Q9NZT1 146 aa10.17□□□□□ -0.78
CUX1-204ENST00000393824 TRPC4Q9UBN4 977 aa10.17□□□□□ -0.78
CUX1-204ENST00000393824 SLC22A7Q9Y694 548 aa10.17□□□□□ -0.78
CUX1-204ENST00000393824 OTOGLQ3ZCN5 2332 aa10.17□□□□□ -0.78
CUX1-204ENST00000393824 TP53BP1Q12888 1972 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms