RNA–Protein interactions for RNA: ENST00000366857.9

CNIH4-202, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 1 (best) BASIC

Gene CNIH4, Length 3,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-202ENST00000366857 IGHEP01854 428 aa8.3□□□□□ -1.08
CNIH4-202ENST00000366857 CCL1P22362 96 aa8.3□□□□□ -1.08
CNIH4-202ENST00000366857 BTCP35070 178 aa8.3□□□□□ -1.08
CNIH4-202ENST00000366857 MNDAP41218 407 aa8.3□□□□□ -1.08
CNIH4-202ENST00000366857 RFX2P48378 723 aa8.3□□□□□ -1.08
CNIH4-202ENST00000366857 IL1RL1Q01638 556 aa8.3□□□□□ -1.08
CNIH4-202ENST00000366857 HSF2Q03933 536 aa8.3□□□□□ -1.08
CNIH4-202ENST00000366857 CASP12Q6UXS9 341 aa8.3□□□□□ -1.08
CNIH4-202ENST00000366857 LINGO2Q7L985 606 aa8.3□□□□□ -1.08
CNIH4-202ENST00000366857 LYSMD2Q8IV50 215 aa8.3□□□□□ -1.08
CNIH4-202ENST00000366857 SYT14Q8NB59 555 aa8.3□□□□□ -1.08
CNIH4-202ENST00000366857 DUSP19Q8WTR2 217 aa8.3□□□□□ -1.08
CNIH4-202ENST00000366857 ALG8Q9BVK2 526 aa8.3□□□□□ -1.08
CNIH4-202ENST00000366857 DCSTAMPQ9H295 470 aa8.3□□□□□ -1.08
CNIH4-202ENST00000366857 B9D1Q9UPM9 204 aa8.3□□□□□ -1.08
CNIH4-202ENST00000366857 PRSS37A4D1T9 235 aa8.3□□□□□ -1.08
CNIH4-202ENST00000366857 WIPF3A6NGB9 483 aa8.3□□□□□ -1.08
CNIH4-202ENST00000366857 E9PLN8 166 aa8.3□□□□□ -1.08
CNIH4-202ENST00000366857 RPS5P46782 204 aaKnown RBP8.3□□□□□ -1.08
CNIH4-202ENST00000366857 SLC16A1P53985 500 aa8.3□□□□□ -1.08
CNIH4-202ENST00000366857 EGR3Q06889 387 aa8.3□□□□□ -1.08
CNIH4-202ENST00000366857 EIF3IQ13347 325 aaKnown RBP8.3□□□□□ -1.08
CNIH4-202ENST00000366857 SNAP47Q5SQN1 464 aa8.3□□□□□ -1.08
CNIH4-202ENST00000366857 DCDC5Q6ZRR9 648 aa8.3□□□□□ -1.08
CNIH4-202ENST00000366857 ATOH1Q92858 354 aaPredicted RBP8.3□□□□□ -1.08
CNIH4-202ENST00000366857 ZNF224Q9NZL3 707 aa8.3□□□□□ -1.08
CNIH4-202ENST00000366857 GTPBP1O00178 669 aaKnown RBP8.29□□□□□ -1.08
CNIH4-202ENST00000366857 GABRPO00591 440 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 NR4A1P22736 598 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 MTNR1BP49286 362 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 RPL27P61353 136 aaKnown RBP8.29□□□□□ -1.08
CNIH4-202ENST00000366857 PRR23CQ6ZRP0 262 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 MDGA2Q7Z553 956 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 TAGAPQ8N103 731 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 PARP16Q8N5Y8 322 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 DLL3Q9NYJ7 618 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 CYB5R1Q9UHQ9 305 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 MRTO4Q9UKD2 239 aaKnown RBP8.29□□□□□ -1.08
CNIH4-202ENST00000366857 IGKV3D-15A0A087WSY6 115 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 TEX13CA0A0J9YWL9 993 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 H3BN98 237 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 SELENOFO60613 162 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 TMEM127O75204 238 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 ADRA2CP18825 462 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 DCTDP32321 178 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 OR12D2P58182 307 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 QRFPP83859 136 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 PLPP7Q8NBV4 271 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 SDR9C7Q8NEX9 313 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 OR51A7Q8NH64 312 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 TRIM63Q969Q1 353 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 PLEKHA8Q96JA3 519 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 SLC38A2Q96QD8 506 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 UCN2Q96RP3 112 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 PLSCR2Q9NRY7 297 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 OR4C45A6NMZ5 311 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 FOXI3A8MTJ6 420 aaPredicted RBP8.29□□□□□ -1.08
CNIH4-202ENST00000366857 PNPP00491 289 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 CFIP05156 583 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 CLEC2LP0C7M8 214 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 PGCP20142 388 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 CAPZA2P47755 286 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 SZRD1Q7Z422 152 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 BEST3Q8N1M1 668 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 OTOSQ8NHW6 89 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 HSD17B8Q92506 261 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 TMCO6Q96DC7 493 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 MNTQ99583 582 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 ULBP3Q9BZM4 244 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 WDR76Q9H967 626 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 NCDNQ9UBB6 729 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 FKBP7Q9Y680 259 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 C12orf71A8MTZ7 269 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 RFPL3SP0C7P2 107 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 CTLA4P16410 223 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 PTBP1P26599 531 aaKnown RBP eCLIP8.29□□□□□ -1.08
CNIH4-202ENST00000366857 NRG3P56975 720 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 STK11Q15831 433 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 ZNF404Q494X3 552 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 GPR139Q6DWJ6 353 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 C6orf15Q6UXA7 325 aaPredicted RBP8.29□□□□□ -1.08
CNIH4-202ENST00000366857 LHFPL3Q86UP9 236 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 PHOSPHO1Q8TCT1 267 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 TM9SF2Q99805 663 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 KRCC1Q9NPI7 259 aaPredicted RBP8.29□□□□□ -1.08
CNIH4-202ENST00000366857 FAM206AQ9NX38 181 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 ALKBH4Q9NXW9 302 aa8.29□□□□□ -1.08
CNIH4-202ENST00000366857 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.28□□□□□ -1.08
CNIH4-202ENST00000366857 NDUFB5O43674 189 aa8.28□□□□□ -1.08
CNIH4-202ENST00000366857 RPS3AP61247 264 aaKnown RBP8.28□□□□□ -1.08
CNIH4-202ENST00000366857 ERVK-25P63136 954 aa8.28□□□□□ -1.08
CNIH4-202ENST00000366857 RTP5Q14D33 572 aa8.28□□□□□ -1.08
CNIH4-202ENST00000366857 LIPKQ5VXJ0 399 aa8.28□□□□□ -1.08
CNIH4-202ENST00000366857 GATSQ8NAP1 163 aa8.28□□□□□ -1.08
CNIH4-202ENST00000366857 OR5L2Q8NGL0 311 aa8.28□□□□□ -1.08
CNIH4-202ENST00000366857 CMTM3Q96MX0 182 aa8.28□□□□□ -1.08
CNIH4-202ENST00000366857 CRB3Q9BUF7 120 aa8.28□□□□□ -1.08
CNIH4-202ENST00000366857 SRXN1Q9BYN0 137 aa8.28□□□□□ -1.08
CNIH4-202ENST00000366857 OR11A1Q9GZK7 315 aa8.28□□□□□ -1.08
CNIH4-202ENST00000366857 PLGRKTQ9HBL7 147 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms