RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 EXOSC3Q9NQT5 275 aaKnown RBP13□□□□□ -0.33
NIPAL3-203ENST00000358028 PAQR5Q9NXK6 330 aaPredicted RBP13□□□□□ -0.33
NIPAL3-203ENST00000358028 ADAM18Q9Y3Q7 739 aa13□□□□□ -0.33
NIPAL3-203ENST00000358028 CLCA3PQ9Y6N3 262 aa13□□□□□ -0.33
NIPAL3-203ENST00000358028 DSPP15924 2871 aaKnown RBP13□□□□□ -0.33
NIPAL3-203ENST00000358028 CELSR3Q9NYQ7 3312 aa13□□□□□ -0.33
NIPAL3-203ENST00000358028 FRG2CA6NGY1 282 aa12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 GPRIN2O60269 458 aa12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 ARSBP15848 533 aa12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 AHCYP23526 432 aa12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 DIO1P49895 249 aa12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 CDK5R1Q15078 307 aa12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 PON3Q15166 354 aa12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 PLA1AQ53H76 456 aa12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 CDCP2Q5VXM1 449 aa12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 OVCH1Q7RTY7 1134 aa12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 ATG4DQ86TL0 474 aaPredicted RBP12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 SLC35F2Q8IXU6 374 aa12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 RFLNBQ8N5W9 214 aa12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 YIPF7Q8N8F6 280 aa12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 KDF1Q8NAX2 398 aaPredicted RBP12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 OR1L3Q8NH93 324 aa12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 OR14A16Q8NHC5 309 aa12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 AKAP1Q92667 903 aaKnown RBP eCLIP12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 LCORQ96JN0 433 aaPredicted RBP12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 OR8D2Q9GZM6 311 aa12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 NRIP3Q9NQ35 241 aa12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 ATXN7L1Q9ULK2 861 aaPredicted RBP12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 MSRB2Q9Y3D2 182 aa12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 NTN3O00634 580 aaPredicted RBP12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 ZNF264O43296 627 aa12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 ARHGEF9O43307 516 aa12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 FZD7O75084 574 aa12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 UBL3O95164 117 aa12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 IGKV3-11P04433 115 aa12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 UCHL1P09936 223 aa12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 GZMKP49863 264 aa12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 GDI2P50395 445 aaKnown RBP12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 CCR4P51679 360 aa12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 HCCSP53701 268 aa12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 PRPS1P60891 318 aa12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 ERVK-25P63136 954 aa12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 SIRPAP78324 504 aa12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 FAPQ12884 760 aa12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 TNK1Q13470 666 aa12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 GXYLT1Q4G148 440 aa12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 TP53I3Q53FA7 332 aa12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 RPTNQ6XPR3 784 aa12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 TMPRSS9Q7Z410 1059 aa12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 TMPRSS12Q86WS5 348 aa12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 NPEPL1Q8NDH3 523 aa12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 MOSPD2Q8NHP6 518 aa12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 ZNF721Q8TF20 911 aa12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 GPX7Q96SL4 187 aaPredicted RBP12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 DDOQ99489 341 aa12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 C7orf50Q9BRJ6 194 aaKnown RBP12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 DHCR7Q9UBM7 475 aaKnown RBP12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 TEKT2Q9UIF3 430 aa12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 MRTO4Q9UKD2 239 aaKnown RBP12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 CACNG2Q9Y698 323 aa12.99□□□□□ -0.33
NIPAL3-203ENST00000358028 ADAMTS20P59510 1910 aa12.98□□□□□ -0.33
NIPAL3-203ENST00000358028 HEATR5AQ86XA9 2040 aa12.98□□□□□ -0.33
NIPAL3-203ENST00000358028 OR6C70A6NIJ9 312 aa12.98□□□□□ -0.33
NIPAL3-203ENST00000358028 D6RAR5 112 aa12.98□□□□□ -0.33
NIPAL3-203ENST00000358028 DUX1O43812 170 aa12.98□□□□□ -0.33
NIPAL3-203ENST00000358028 DDAH2O95865 285 aa12.98□□□□□ -0.33
NIPAL3-203ENST00000358028 MT-CO3P00414 261 aa12.98□□□□□ -0.33
NIPAL3-203ENST00000358028 SPI1P17947 270 aa12.98□□□□□ -0.33
NIPAL3-203ENST00000358028 FBLP22087 321 aaKnown RBP12.98□□□□□ -0.33
NIPAL3-203ENST00000358028 CSF2RBP32927 897 aa12.98□□□□□ -0.33
NIPAL3-203ENST00000358028 ACVR1BP36896 505 aa12.98□□□□□ -0.33
NIPAL3-203ENST00000358028 NAA10P41227 235 aaPredicted RBP12.98□□□□□ -0.33
NIPAL3-203ENST00000358028 OR10A3P58181 314 aa12.98□□□□□ -0.33
NIPAL3-203ENST00000358028 CFHR1Q03591 330 aa12.98□□□□□ -0.33
NIPAL3-203ENST00000358028 MAB21L1Q13394 359 aa12.98□□□□□ -0.33
NIPAL3-203ENST00000358028 ELAVL1Q15717 326 aaKnown RBP12.98□□□□□ -0.33
NIPAL3-203ENST00000358028 HSD17B12Q53GQ0 312 aa12.98□□□□□ -0.33
NIPAL3-203ENST00000358028 SNAP47Q5SQN1 464 aa12.98□□□□□ -0.33
NIPAL3-203ENST00000358028 FAM27D1Q5T7N8 215 aa12.98□□□□□ -0.33
NIPAL3-203ENST00000358028 APOOLQ6UXV4 268 aa12.98□□□□□ -0.33
NIPAL3-203ENST00000358028 PLXDC1Q8IUK5 500 aa12.98□□□□□ -0.33
NIPAL3-203ENST00000358028 OR51L1Q8NGJ5 315 aa12.98□□□□□ -0.33
NIPAL3-203ENST00000358028 LIPHQ8WWY8 451 aa12.98□□□□□ -0.33
NIPAL3-203ENST00000358028 THAP4Q8WY91 577 aa12.98□□□□□ -0.33
NIPAL3-203ENST00000358028 ADIPOR1Q96A54 375 aa12.98□□□□□ -0.33
NIPAL3-203ENST00000358028 RASD2Q96D21 266 aa12.98□□□□□ -0.33
NIPAL3-203ENST00000358028 PELI1Q96FA3 418 aa12.98□□□□□ -0.33
NIPAL3-203ENST00000358028 GFM1Q96RP9 751 aaKnown RBP12.98□□□□□ -0.33
NIPAL3-203ENST00000358028 NMNAT3Q96T66 252 aa12.98□□□□□ -0.33
NIPAL3-203ENST00000358028 TTTY10Q9BZA0 68 aa12.98□□□□□ -0.33
NIPAL3-203ENST00000358028 NMNAT2Q9BZQ4 307 aa12.98□□□□□ -0.33
NIPAL3-203ENST00000358028 KLHL1Q9NR64 748 aa12.98□□□□□ -0.33
NIPAL3-203ENST00000358028 WDR70Q9NW82 654 aa12.98□□□□□ -0.33
NIPAL3-203ENST00000358028 MRPL39Q9NYK5 338 aaKnown RBP12.98□□□□□ -0.33
NIPAL3-203ENST00000358028 COPZ2Q9P299 210 aa12.98□□□□□ -0.33
NIPAL3-203ENST00000358028 SLC6A5Q9Y345 797 aa12.98□□□□□ -0.33
NIPAL3-203ENST00000358028 ANKRD11Q6UB99 2663 aaPredicted RBP12.98□□□□□ -0.33
NIPAL3-203ENST00000358028 LAMA5O15230 3695 aa12.98□□□□□ -0.33
NIPAL3-203ENST00000358028 PKD1L2Q7Z442 2459 aa12.97□□□□□ -0.33
NIPAL3-203ENST00000358028 ZNF879B4DU55 563 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms