RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 AHCYP23526 432 aa16.97■□□□□ 0.31
LIME1-201ENST00000309546 CALCRP30988 508 aa16.97■□□□□ 0.31
LIME1-201ENST00000309546 SERPINF1P36955 418 aa16.97■□□□□ 0.31
LIME1-201ENST00000309546 PUDPQ08623 228 aa16.97■□□□□ 0.31
LIME1-201ENST00000309546 NPTX1Q15818 432 aa16.97■□□□□ 0.31
LIME1-201ENST00000309546 SWI5Q1ZZU3 235 aa16.97■□□□□ 0.31
LIME1-201ENST00000309546 ENTPD8Q5MY95 495 aa16.97■□□□□ 0.31
LIME1-201ENST00000309546 SWT1Q5T5J6 900 aaKnown RBP16.97■□□□□ 0.31
LIME1-201ENST00000309546 SLC46A3Q7Z3Q1 461 aa16.97■□□□□ 0.31
LIME1-201ENST00000309546 MYPOPQ86VE0 399 aaPredicted RBP16.97■□□□□ 0.31
LIME1-201ENST00000309546 SLC30A8Q8IWU4 369 aa16.97■□□□□ 0.31
LIME1-201ENST00000309546 ANKK1Q8NFD2 765 aa16.97■□□□□ 0.31
LIME1-201ENST00000309546 OR6T1Q8NGN1 323 aa16.97■□□□□ 0.31
LIME1-201ENST00000309546 OR10A6Q8NH74 314 aa16.97■□□□□ 0.31
LIME1-201ENST00000309546 SLC26A7Q8TE54 656 aa16.97■□□□□ 0.31
LIME1-201ENST00000309546 TSPEARQ8WU66 669 aa16.97■□□□□ 0.31
LIME1-201ENST00000309546 TXNDC15Q96J42 360 aa16.97■□□□□ 0.31
LIME1-201ENST00000309546 TMEM43Q9BTV4 400 aa16.97■□□□□ 0.31
LIME1-201ENST00000309546 KAT8Q9H7Z6 458 aaKnown RBP16.97■□□□□ 0.31
LIME1-201ENST00000309546 MOV10Q9HCE1 1003 aaKnown RBP16.97■□□□□ 0.31
LIME1-201ENST00000309546 MRPL39Q9NYK5 338 aaKnown RBP16.97■□□□□ 0.31
LIME1-201ENST00000309546 NOX1Q9Y5S8 564 aa16.97■□□□□ 0.31
LIME1-201ENST00000309546 FKBP7Q9Y680 259 aa16.97■□□□□ 0.31
LIME1-201ENST00000309546 A0A096LNT2 108 aa16.96■□□□□ 0.31
LIME1-201ENST00000309546 SLC35F4A4IF30 521 aa16.96■□□□□ 0.31
LIME1-201ENST00000309546 ZNF503-AS2A6NEH8 195 aa16.96■□□□□ 0.31
LIME1-201ENST00000309546 C11orf98E9PRG8 122 aa16.96■□□□□ 0.31
LIME1-201ENST00000309546 CHP2O43745 196 aa16.96■□□□□ 0.31
LIME1-201ENST00000309546 FMO6PO60774 539 aa16.96■□□□□ 0.31
LIME1-201ENST00000309546 IGKV3-15P01624 115 aa16.96■□□□□ 0.31
LIME1-201ENST00000309546 IGLV1-44P01699 117 aa16.96■□□□□ 0.31
LIME1-201ENST00000309546 CBR1P16152 277 aa16.96■□□□□ 0.31
LIME1-201ENST00000309546 SLC25A16P16260 332 aa16.96■□□□□ 0.31
LIME1-201ENST00000309546 PCGF2P35227 344 aa16.96■□□□□ 0.31
LIME1-201ENST00000309546 SF3A3Q12874 501 aaKnown RBP eCLIP16.96■□□□□ 0.31
LIME1-201ENST00000309546 CAMK2DQ13557 499 aa16.96■□□□□ 0.31
LIME1-201ENST00000309546 MST1LQ2TV78 715 aa16.96■□□□□ 0.31
LIME1-201ENST00000309546 C3orf36Q3SXR2 165 aa16.96■□□□□ 0.31
LIME1-201ENST00000309546 ZNF613Q6PF04 617 aa16.96■□□□□ 0.31
LIME1-201ENST00000309546 PATL1Q86TB9 770 aaKnown RBP16.96■□□□□ 0.31
LIME1-201ENST00000309546 RBM45Q8IUH3 476 aaKnown RBP16.96■□□□□ 0.31
LIME1-201ENST00000309546 C20orf196Q8IYI0 205 aa16.96■□□□□ 0.31
LIME1-201ENST00000309546 OR6N1Q8NGY5 312 aa16.96■□□□□ 0.31
LIME1-201ENST00000309546 SORCS2Q96PQ0 1159 aa16.96■□□□□ 0.31
LIME1-201ENST00000309546 VRK1Q99986 396 aaPredicted RBP16.96■□□□□ 0.31
LIME1-201ENST00000309546 B3GAT2Q9NPZ5 323 aa16.96■□□□□ 0.31
LIME1-201ENST00000309546 ZNF726A6NNF4 738 aa16.95■□□□□ 0.3
LIME1-201ENST00000309546 ZNF99A8MXY4 864 aaPredicted RBP16.95■□□□□ 0.3
LIME1-201ENST00000309546 KPNA4O00629 521 aaPredicted RBP16.95■□□□□ 0.3
LIME1-201ENST00000309546 SASH3O75995 380 aa16.95■□□□□ 0.3
LIME1-201ENST00000309546 C8BP07358 591 aa16.95■□□□□ 0.3
LIME1-201ENST00000309546 CSF3P09919 207 aa16.95■□□□□ 0.3
LIME1-201ENST00000309546 OR4A8P0C604 315 aa16.95■□□□□ 0.3
LIME1-201ENST00000309546 ADORA3P0DMS8 318 aa16.95■□□□□ 0.3
LIME1-201ENST00000309546 ARR3P36575 388 aa16.95■□□□□ 0.3
LIME1-201ENST00000309546 ADIPOQQ15848 244 aa16.95■□□□□ 0.3
LIME1-201ENST00000309546 CARTPTQ16568 116 aa16.95■□□□□ 0.3
LIME1-201ENST00000309546 TMEM249Q2WGJ8 235 aa16.95■□□□□ 0.3
LIME1-201ENST00000309546 WDR88Q6ZMY6 472 aa16.95■□□□□ 0.3
LIME1-201ENST00000309546 MDP1Q86V88 176 aa16.95■□□□□ 0.3
LIME1-201ENST00000309546 ANKS4BQ8N8V4 417 aa16.95■□□□□ 0.3
LIME1-201ENST00000309546 OR4D11Q8NGI4 311 aa16.95■□□□□ 0.3
LIME1-201ENST00000309546 OR5J2Q8NH18 312 aa16.95■□□□□ 0.3
LIME1-201ENST00000309546 C10orf105Q8TEF2 133 aa16.95■□□□□ 0.3
LIME1-201ENST00000309546 NANOS1Q8WY41 292 aaKnown RBP16.95■□□□□ 0.3
LIME1-201ENST00000309546 TAMM41Q96BW9 452 aa16.95■□□□□ 0.3
LIME1-201ENST00000309546 TNFRSF13CQ96RJ3 184 aa16.95■□□□□ 0.3
LIME1-201ENST00000309546 ULBP2Q9BZM5 246 aa16.95■□□□□ 0.3
LIME1-201ENST00000309546 USP22Q9UPT9 525 aa16.95■□□□□ 0.3
LIME1-201ENST00000309546 YLPM1P49750 1951 aaKnown RBP16.95■□□□□ 0.3
LIME1-201ENST00000309546 B9A039 149 aa16.94■□□□□ 0.3
LIME1-201ENST00000309546 FBP2O00757 339 aa16.94■□□□□ 0.3
LIME1-201ENST00000309546 PLPP3O14495 311 aa16.94■□□□□ 0.3
LIME1-201ENST00000309546 OR6A2O95222 327 aa16.94■□□□□ 0.3
LIME1-201ENST00000309546 F12P00748 615 aaPredicted RBP16.94■□□□□ 0.3
LIME1-201ENST00000309546 MT-ATP6P00846 226 aa16.94■□□□□ 0.3
LIME1-201ENST00000309546 CD247P20963 164 aa16.94■□□□□ 0.3
LIME1-201ENST00000309546 LOXL1Q08397 574 aaPredicted RBP16.94■□□□□ 0.3
LIME1-201ENST00000309546 TRMT5Q32P41 509 aaKnown RBP16.94■□□□□ 0.3
LIME1-201ENST00000309546 INTS11Q5TA45 600 aaKnown RBP16.94■□□□□ 0.3
LIME1-201ENST00000309546 METTL21CQ5VZV1 264 aa16.94■□□□□ 0.3
LIME1-201ENST00000309546 TTC33Q6PID6 262 aaPredicted RBP16.94■□□□□ 0.3
LIME1-201ENST00000309546 ZNF813Q6ZN06 617 aa16.94■□□□□ 0.3
LIME1-201ENST00000309546 WDFY1Q8IWB7 410 aa16.94■□□□□ 0.3
LIME1-201ENST00000309546 FAM169BQ8N8A8 192 aa16.94■□□□□ 0.3
LIME1-201ENST00000309546 OR4F15Q8NGB8 312 aa16.94■□□□□ 0.3
LIME1-201ENST00000309546 ADAMTS16Q8TE57 1224 aa16.94■□□□□ 0.3
LIME1-201ENST00000309546 SLC7A7Q9UM01 511 aa16.94■□□□□ 0.3
LIME1-201ENST00000309546 POFUT2Q9Y2G5 429 aa16.94■□□□□ 0.3
LIME1-201ENST00000309546 DNHD1Q96M86 4753 aa16.94■□□□□ 0.3
LIME1-201ENST00000309546 IGHV2OR16-5A0A0B4J2B6 119 aa16.93■□□□□ 0.3
LIME1-201ENST00000309546 A8MV72 311 aaPredicted RBP16.93■□□□□ 0.3
LIME1-201ENST00000309546 PDE5AO76074 875 aa16.93■□□□□ 0.3
LIME1-201ENST00000309546 CH25HO95992 272 aa16.93■□□□□ 0.3
LIME1-201ENST00000309546 HLA-HP01893 362 aa16.93■□□□□ 0.3
LIME1-201ENST00000309546 TROVE2P10155 538 aaKnown RBP eCLIP16.93■□□□□ 0.3
LIME1-201ENST00000309546 CD79AP11912 226 aa16.93■□□□□ 0.3
LIME1-201ENST00000309546 B4GALT1P15291 398 aa16.93■□□□□ 0.3
LIME1-201ENST00000309546 PDLIM4P50479 330 aa16.93■□□□□ 0.3
LIME1-201ENST00000309546 BIDP55957 195 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms