RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 SELENONQ9NZV5 590 aa14.95□□□□□ -0.02
SDCBP-201ENST00000260130 JKAMPQ9P055 326 aa14.95□□□□□ -0.02
SDCBP-201ENST00000260130 RPS6KA6Q9UK32 745 aa14.95□□□□□ -0.02
SDCBP-201ENST00000260130 CLEC4AQ9UMR7 237 aa14.95□□□□□ -0.02
SDCBP-201ENST00000260130 IGHV3-15A0A0B4J1V0 119 aa14.95□□□□□ -0.02
SDCBP-201ENST00000260130 A8MVM7 634 aa14.95□□□□□ -0.02
SDCBP-201ENST00000260130 EEF1E1-BLOC1S5C9J1V9 151 aa14.95□□□□□ -0.02
SDCBP-201ENST00000260130 EEF1E1O43324 174 aaKnown RBP14.95□□□□□ -0.02
SDCBP-201ENST00000260130 MRPS14O60783 128 aaKnown RBP14.95□□□□□ -0.02
SDCBP-201ENST00000260130 SS18L1O75177 396 aaPredicted RBP14.95□□□□□ -0.02
SDCBP-201ENST00000260130 ZNF682O95780 498 aa14.95□□□□□ -0.02
SDCBP-201ENST00000260130 SERPINB10P48595 397 aa14.95□□□□□ -0.02
SDCBP-201ENST00000260130 ASCL1P50553 236 aa14.95□□□□□ -0.02
SDCBP-201ENST00000260130 NPTX1Q15818 432 aa14.95□□□□□ -0.02
SDCBP-201ENST00000260130 TRIM16LQ309B1 348 aa14.95□□□□□ -0.02
SDCBP-201ENST00000260130 ALG10BQ5I7T1 473 aa14.95□□□□□ -0.02
SDCBP-201ENST00000260130 VWA1Q6PCB0 445 aa14.95□□□□□ -0.02
SDCBP-201ENST00000260130 SVOPQ8N4V2 548 aa14.95□□□□□ -0.02
SDCBP-201ENST00000260130 OR4D11Q8NGI4 311 aa14.95□□□□□ -0.02
SDCBP-201ENST00000260130 ABHD3Q8WU67 409 aa14.95□□□□□ -0.02
SDCBP-201ENST00000260130 RIBC2Q9H4K1 309 aa14.95□□□□□ -0.02
SDCBP-201ENST00000260130 SLC9A8Q9Y2E8 581 aa14.95□□□□□ -0.02
SDCBP-201ENST00000260130 ELOA3DA6NLF2 546 aaPredicted RBP14.94□□□□□ -0.02
SDCBP-201ENST00000260130 TMEM229AB2RXF0 380 aa14.94□□□□□ -0.02
SDCBP-201ENST00000260130 M0R3G1 203 aa14.94□□□□□ -0.02
SDCBP-201ENST00000260130 SMAD9O15198 467 aaKnown RBP14.94□□□□□ -0.02
SDCBP-201ENST00000260130 DNPH1O43598 174 aa14.94□□□□□ -0.02
SDCBP-201ENST00000260130 XPNPEP2O43895 674 aa14.94□□□□□ -0.02
SDCBP-201ENST00000260130 PNMTP11086 282 aa14.94□□□□□ -0.02
SDCBP-201ENST00000260130 DNAJA1P31689 397 aaKnown RBP14.94□□□□□ -0.02
SDCBP-201ENST00000260130 OR2B6P58173 313 aa14.94□□□□□ -0.02
SDCBP-201ENST00000260130 SIRPAP78324 504 aa14.94□□□□□ -0.02
SDCBP-201ENST00000260130 DGUOKQ16854 277 aa14.94□□□□□ -0.02
SDCBP-201ENST00000260130 ELOA3BQ3SY89 546 aa14.94□□□□□ -0.02
SDCBP-201ENST00000260130 FBXL19-AS1Q494R0 122 aa14.94□□□□□ -0.02
SDCBP-201ENST00000260130 BTLAQ7Z6A9 289 aa14.94□□□□□ -0.02
SDCBP-201ENST00000260130 RBM45Q8IUH3 476 aaKnown RBP14.94□□□□□ -0.02
SDCBP-201ENST00000260130 MINDY2Q8NBR6 621 aa14.94□□□□□ -0.02
SDCBP-201ENST00000260130 ELOA3Q8NG57 546 aa14.94□□□□□ -0.02
SDCBP-201ENST00000260130 SLC38A4Q969I6 547 aa14.94□□□□□ -0.02
SDCBP-201ENST00000260130 ZHX1-C8orf76Q96EF9 292 aa14.94□□□□□ -0.02
SDCBP-201ENST00000260130 LRRC46Q96FV0 321 aa14.94□□□□□ -0.02
SDCBP-201ENST00000260130 DUSP21Q9H596 190 aa14.94□□□□□ -0.02
SDCBP-201ENST00000260130 CCNB1IP1Q9NPC3 277 aa14.94□□□□□ -0.02
SDCBP-201ENST00000260130 NPDC1Q9NQX5 325 aaPredicted RBP14.94□□□□□ -0.02
SDCBP-201ENST00000260130 PAIP2BQ9ULR5 123 aaKnown RBP14.94□□□□□ -0.02
SDCBP-201ENST00000260130 EMC9Q9Y3B6 208 aa14.94□□□□□ -0.02
SDCBP-201ENST00000260130 A0A0B4J2E0 115 aa14.94□□□□□ -0.02
SDCBP-201ENST00000260130 A0A1B0GX12 115 aa14.94□□□□□ -0.02
SDCBP-201ENST00000260130 FPR1P21462 350 aa14.94□□□□□ -0.02
SDCBP-201ENST00000260130 NR4A1P22736 598 aa14.94□□□□□ -0.02
SDCBP-201ENST00000260130 CTBP2P56545 445 aa14.94□□□□□ -0.02
SDCBP-201ENST00000260130 SELENOWP63302 87 aa14.94□□□□□ -0.02
SDCBP-201ENST00000260130 MVKQ03426 396 aa14.94□□□□□ -0.02
SDCBP-201ENST00000260130 KDM4DQ6B0I6 523 aa14.94□□□□□ -0.02
SDCBP-201ENST00000260130 GALNT5Q7Z7M9 940 aa14.94□□□□□ -0.02
SDCBP-201ENST00000260130 CYP4Z1Q86W10 505 aa14.94□□□□□ -0.02
SDCBP-201ENST00000260130 STK35Q8TDR2 534 aa14.94□□□□□ -0.02
SDCBP-201ENST00000260130 ITPKCQ96DU7 683 aa14.94□□□□□ -0.02
SDCBP-201ENST00000260130 AKIP1Q9NQ31 210 aa14.94□□□□□ -0.02
SDCBP-201ENST00000260130 VNN3Q9NY84 501 aa14.94□□□□□ -0.02
SDCBP-201ENST00000260130 GMPPBQ9Y5P6 360 aa14.94□□□□□ -0.02
SDCBP-201ENST00000260130 MITFO75030 526 aaPredicted RBP14.93□□□□□ -0.02
SDCBP-201ENST00000260130 NPIPB7O75200 414 aa14.93□□□□□ -0.02
SDCBP-201ENST00000260130 FABP3P05413 133 aa14.93□□□□□ -0.02
SDCBP-201ENST00000260130 KLK2P20151 261 aa14.93□□□□□ -0.02
SDCBP-201ENST00000260130 IDUAP35475 653 aa14.93□□□□□ -0.02
SDCBP-201ENST00000260130 SLC35A2P78381 396 aa14.93□□□□□ -0.02
SDCBP-201ENST00000260130 SLC35A1P78382 337 aa14.93□□□□□ -0.02
SDCBP-201ENST00000260130 ENTPD8Q5MY95 495 aa14.93□□□□□ -0.02
SDCBP-201ENST00000260130 ZNF613Q6PF04 617 aa14.93□□□□□ -0.02
SDCBP-201ENST00000260130 LUZP2Q86TE4 346 aa14.93□□□□□ -0.02
SDCBP-201ENST00000260130 MED12LQ86YW9 2145 aa14.93□□□□□ -0.02
SDCBP-201ENST00000260130 TPD52L3Q96J77 140 aa14.93□□□□□ -0.02
SDCBP-201ENST00000260130 MROQ9BYG7 248 aa14.93□□□□□ -0.02
SDCBP-201ENST00000260130 ENKD1Q9H0I2 346 aa14.93□□□□□ -0.02
SDCBP-201ENST00000260130 GP6Q9HCN6 339 aa14.93□□□□□ -0.02
SDCBP-201ENST00000260130 ADPRHL2Q9NX46 363 aa14.93□□□□□ -0.02
SDCBP-201ENST00000260130 KLHL9Q9P2J3 617 aa14.93□□□□□ -0.02
SDCBP-201ENST00000260130 ERVK-18Q9QC07 812 aa14.93□□□□□ -0.02
SDCBP-201ENST00000260130 DAPK2Q9UIK4 370 aa14.93□□□□□ -0.02
SDCBP-201ENST00000260130 A8MXE2 369 aa14.92□□□□□ -0.02
SDCBP-201ENST00000260130 MSTNO14793 375 aa14.92□□□□□ -0.02
SDCBP-201ENST00000260130 EIF1BO60739 113 aaKnown RBP14.92□□□□□ -0.02
SDCBP-201ENST00000260130 CYTIPO60759 359 aa14.92□□□□□ -0.02
SDCBP-201ENST00000260130 ATP6V1G1O75348 118 aa14.92□□□□□ -0.02
SDCBP-201ENST00000260130 CGAP01215 116 aa14.92□□□□□ -0.02
SDCBP-201ENST00000260130 FMO3P31513 532 aa14.92□□□□□ -0.02
SDCBP-201ENST00000260130 DAPP51397 102 aa14.92□□□□□ -0.02
SDCBP-201ENST00000260130 CDH12P55289 794 aa14.92□□□□□ -0.02
SDCBP-201ENST00000260130 IL1RL1Q01638 556 aa14.92□□□□□ -0.02
SDCBP-201ENST00000260130 EGR4Q05215 589 aa14.92□□□□□ -0.02
SDCBP-201ENST00000260130 RASGEF1BQ0VAM2 473 aa14.92□□□□□ -0.02
SDCBP-201ENST00000260130 C1orf140Q5VVS0 124 aa14.92□□□□□ -0.02
SDCBP-201ENST00000260130 OR6K3Q8NGY3 331 aa14.92□□□□□ -0.02
SDCBP-201ENST00000260130 RNASE6Q93091 150 aaKnown RBP14.92□□□□□ -0.02
SDCBP-201ENST00000260130 YIPF6Q96EC8 236 aa14.92□□□□□ -0.02
SDCBP-201ENST00000260130 KLHL13Q9P2N7 655 aa14.92□□□□□ -0.02
SDCBP-201ENST00000260130 FOXD3Q9UJU5 478 aaPredicted RBP14.92□□□□□ -0.02
SDCBP-201ENST00000260130 A0A087WUJ7 227 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms