RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 TTYH2Q9BSA4 534 aa10.98□□□□□ -0.65
LINC00339-213ENST00000642137 TACO1Q9BSH4 297 aaKnown RBP10.98□□□□□ -0.65
LINC00339-213ENST00000642137 BCO1Q9HAY6 547 aa10.98□□□□□ -0.65
LINC00339-213ENST00000642137 INIPQ9NRY2 104 aa10.98□□□□□ -0.65
LINC00339-213ENST00000642137 B3GAT1Q9P2W7 334 aa10.98□□□□□ -0.65
LINC00339-213ENST00000642137 ORC6Q9Y5N6 252 aa10.98□□□□□ -0.65
LINC00339-213ENST00000642137 NOX1Q9Y5S8 564 aa10.98□□□□□ -0.65
LINC00339-213ENST00000642137 CDH10Q9Y6N8 788 aa10.98□□□□□ -0.65
LINC00339-213ENST00000642137 ITPR1Q14643 2758 aa10.98□□□□□ -0.65
LINC00339-213ENST00000642137 PHF3Q92576 2039 aaKnown RBP10.97□□□□□ -0.65
LINC00339-213ENST00000642137 A0A1W2PRG6 482 aa10.97□□□□□ -0.65
LINC00339-213ENST00000642137 NPIPB13A6NJU9 1138 aa10.97□□□□□ -0.65
LINC00339-213ENST00000642137 KDM4EB2RXH2 506 aaPredicted RBP10.97□□□□□ -0.65
LINC00339-213ENST00000642137 NPIPB4C9JG80 1138 aa10.97□□□□□ -0.65
LINC00339-213ENST00000642137 E9PLN8 166 aa10.97□□□□□ -0.65
LINC00339-213ENST00000642137 C11orf98E9PRG8 122 aa10.97□□□□□ -0.65
LINC00339-213ENST00000642137 H0YJX3 145 aa10.97□□□□□ -0.65
LINC00339-213ENST00000642137 GPR171O14626 319 aa10.97□□□□□ -0.65
LINC00339-213ENST00000642137 IMPA2O14732 288 aa10.97□□□□□ -0.65
LINC00339-213ENST00000642137 MITFO75030 526 aaPredicted RBP10.97□□□□□ -0.65
LINC00339-213ENST00000642137 CRHP06850 196 aa10.97□□□□□ -0.65
LINC00339-213ENST00000642137 YES1P07947 543 aa10.97□□□□□ -0.65
LINC00339-213ENST00000642137 CD14P08571 375 aa10.97□□□□□ -0.65
LINC00339-213ENST00000642137 CDH2P19022 906 aaPredicted RBP10.97□□□□□ -0.65
LINC00339-213ENST00000642137 SLC6A6P31641 620 aa10.97□□□□□ -0.65
LINC00339-213ENST00000642137 CEACAM8P31997 349 aaPredicted RBP10.97□□□□□ -0.65
LINC00339-213ENST00000642137 GIPRP48546 466 aa10.97□□□□□ -0.65
LINC00339-213ENST00000642137 PTDSS1P48651 473 aaKnown RBP10.97□□□□□ -0.65
LINC00339-213ENST00000642137 IL1RL1Q01638 556 aa10.97□□□□□ -0.65
LINC00339-213ENST00000642137 NPRL3Q12980 569 aa10.97□□□□□ -0.65
LINC00339-213ENST00000642137 EEF1A1P5Q5VTE0 462 aa10.97□□□□□ -0.65
LINC00339-213ENST00000642137 SEM1Q6ZVN7 128 aa10.97□□□□□ -0.65
LINC00339-213ENST00000642137 CREB3L2Q70SY1 520 aa10.97□□□□□ -0.65
LINC00339-213ENST00000642137 GPAT4Q86UL3 456 aa10.97□□□□□ -0.65
LINC00339-213ENST00000642137 ATCAYQ86WG3 371 aa10.97□□□□□ -0.65
LINC00339-213ENST00000642137 GALNT4Q8N4A0 578 aa10.97□□□□□ -0.65
LINC00339-213ENST00000642137 OR9K2Q8NGE7 335 aa10.97□□□□□ -0.65
LINC00339-213ENST00000642137 GMPPAQ96IJ6 420 aaPredicted RBP10.97□□□□□ -0.65
LINC00339-213ENST00000642137 SAMD8Q96LT4 415 aa10.97□□□□□ -0.65
LINC00339-213ENST00000642137 VKORC1Q9BQB6 163 aa10.97□□□□□ -0.65
LINC00339-213ENST00000642137 TSSK6Q9BXA6 273 aa10.97□□□□□ -0.65
LINC00339-213ENST00000642137 ENKD1Q9H0I2 346 aa10.97□□□□□ -0.65
LINC00339-213ENST00000642137 VCXQ9H320 206 aa10.97□□□□□ -0.65
LINC00339-213ENST00000642137 VCX3BQ9H321 246 aa10.97□□□□□ -0.65
LINC00339-213ENST00000642137 TXNIPQ9H3M7 391 aa10.97□□□□□ -0.65
LINC00339-213ENST00000642137 EGLN3Q9H6Z9 239 aa10.97□□□□□ -0.65
LINC00339-213ENST00000642137 NRIP3Q9NQ35 241 aa10.97□□□□□ -0.65
LINC00339-213ENST00000642137 KLHL13Q9P2N7 655 aa10.97□□□□□ -0.65
LINC00339-213ENST00000642137 ING1Q9UK53 422 aaPredicted RBP10.97□□□□□ -0.65
LINC00339-213ENST00000642137 BAIAP2Q9UQB8 552 aa10.97□□□□□ -0.65
LINC00339-213ENST00000642137 OSGIN2Q9Y236 505 aa10.97□□□□□ -0.65
LINC00339-213ENST00000642137 MED12LQ86YW9 2145 aa10.97□□□□□ -0.65
LINC00339-213ENST00000642137 KMT2BQ9UMN6 2715 aaPredicted RBP10.96□□□□□ -0.65
LINC00339-213ENST00000642137 TRGV8A0A0C4DH27 118 aa10.96□□□□□ -0.65
LINC00339-213ENST00000642137 H3BN98 237 aa10.96□□□□□ -0.65
LINC00339-213ENST00000642137 ARPC3O15145 178 aa10.96□□□□□ -0.65
LINC00339-213ENST00000642137 IDH3BO43837 385 aa10.96□□□□□ -0.65
LINC00339-213ENST00000642137 IL2RAP01589 272 aa10.96□□□□□ -0.65
LINC00339-213ENST00000642137 IGHMP01871 453 aa10.96□□□□□ -0.65
LINC00339-213ENST00000642137 F13BP05160 661 aa10.96□□□□□ -0.65
LINC00339-213ENST00000642137 IGFBP1P08833 259 aaPredicted RBP10.96□□□□□ -0.65
LINC00339-213ENST00000642137 GLI4P10075 376 aa10.96□□□□□ -0.65
LINC00339-213ENST00000642137 HLA-DOBP13765 273 aa10.96□□□□□ -0.65
LINC00339-213ENST00000642137 APEHP13798 732 aaKnown RBP10.96□□□□□ -0.65
LINC00339-213ENST00000642137 RPL4P36578 427 aaKnown RBP10.96□□□□□ -0.65
LINC00339-213ENST00000642137 RPS6KA3P51812 740 aa10.96□□□□□ -0.65
LINC00339-213ENST00000642137 CDK5Q00535 292 aa10.96□□□□□ -0.65
LINC00339-213ENST00000642137 MRPL49Q13405 166 aaKnown RBP10.96□□□□□ -0.65
LINC00339-213ENST00000642137 C1DQ13901 141 aaKnown RBP10.96□□□□□ -0.65
LINC00339-213ENST00000642137 IGFBP7Q16270 282 aa10.96□□□□□ -0.65
LINC00339-213ENST00000642137 EIF2S3LQ2VIR3 472 aaKnown RBP10.96□□□□□ -0.65
LINC00339-213ENST00000642137 SLC36A3Q495N2 470 aa10.96□□□□□ -0.65
LINC00339-213ENST00000642137 RIPPLY2Q5TAB7 128 aa10.96□□□□□ -0.65
LINC00339-213ENST00000642137 PLXDC2Q6UX71 529 aa10.96□□□□□ -0.65
LINC00339-213ENST00000642137 THSD4Q6ZMP0 1018 aa10.96□□□□□ -0.65
LINC00339-213ENST00000642137 SLC35D2Q76EJ3 337 aa10.96□□□□□ -0.65
LINC00339-213ENST00000642137 GALNT5Q7Z7M9 940 aa10.96□□□□□ -0.65
LINC00339-213ENST00000642137 TUSC5Q8IXB3 177 aa10.96□□□□□ -0.65
LINC00339-213ENST00000642137 ZIC4Q8N9L1 334 aa10.96□□□□□ -0.65
LINC00339-213ENST00000642137 C9orf106Q8NAJ2 232 aa10.96□□□□□ -0.65
LINC00339-213ENST00000642137 OR52L1Q8NGH7 329 aa10.96□□□□□ -0.65
LINC00339-213ENST00000642137 TEX47Q8TBZ9 253 aa10.96□□□□□ -0.65
LINC00339-213ENST00000642137 FANK1Q8TC84 345 aa10.96□□□□□ -0.65
LINC00339-213ENST00000642137 ABHD3Q8WU67 409 aa10.96□□□□□ -0.65
LINC00339-213ENST00000642137 TMEM45BQ96B21 275 aa10.96□□□□□ -0.65
LINC00339-213ENST00000642137 GABARAPL3Q9BY60 117 aa10.96□□□□□ -0.65
LINC00339-213ENST00000642137 PLA2G12AQ9BZM1 189 aa10.96□□□□□ -0.65
LINC00339-213ENST00000642137 PARPBPQ9NWS1 579 aa10.96□□□□□ -0.65
LINC00339-213ENST00000642137 EMC3Q9P0I2 261 aa10.96□□□□□ -0.65
LINC00339-213ENST00000642137 TINAGQ9UJW2 476 aa10.96□□□□□ -0.65
LINC00339-213ENST00000642137 ZNF346Q9UL40 294 aaKnown RBP10.96□□□□□ -0.65
LINC00339-213ENST00000642137 MEMO1Q9Y316 297 aa10.96□□□□□ -0.65
LINC00339-213ENST00000642137 FLVCR1Q9Y5Y0 555 aa10.96□□□□□ -0.65
LINC00339-213ENST00000642137 EPG5Q9HCE0 2579 aa10.96□□□□□ -0.66
LINC00339-213ENST00000642137 DOCK7Q96N67 2140 aa10.96□□□□□ -0.66
LINC00339-213ENST00000642137 A0A1B0GUH1 482 aa10.95□□□□□ -0.66
LINC00339-213ENST00000642137 MCIDASD6RGH6 385 aa10.95□□□□□ -0.66
LINC00339-213ENST00000642137 SS18L1O75177 396 aaPredicted RBP10.95□□□□□ -0.66
LINC00339-213ENST00000642137 TOXO94900 526 aa10.95□□□□□ -0.66
LINC00339-213ENST00000642137 SOX14O95416 240 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms