RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 HSP90AA4PQ58FG1 418 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 CCDC183Q5T5S1 534 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 ARMC12Q5T9G4 340 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 PWWP2BQ6NUJ5 590 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 IGFL2Q6UWQ7 119 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 CERS6Q6ZMG9 384 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 CHMP1BQ7LBR1 199 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 ZNF571Q7Z3V5 609 aaPredicted RBP2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 ZGRF1Q86YA3 2104 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 HPS6Q86YV9 775 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 LRRC49Q8IUZ0 686 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 MISPQ8IVT2 679 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 OR4N5Q8IXE1 308 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 RAB42Q8N4Z0 105 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 ATPAF2Q8N5M1 289 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 PQLC3Q8N755 202 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 GVQW1Q8N7I0 195 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 ADAD2Q8NCV1 583 aaKnown RBP2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 GPR26Q8NDV2 337 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 DDHD1Q8NEL9 900 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 OR10G6Q8NH81 332 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 FLVCR1-AS1Q8TAF5 88 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 MRGPRDQ8TDS7 321 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 SELENOMQ8WWX9 145 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 TMEM37Q8WXS4 190 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 PHYHIPQ92561 330 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 FCGR1BQ92637 280 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 SLCO2A1Q92959 643 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 PNPLA2Q96AD5 504 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 KIAA1143Q96AT1 154 aaPredicted RBP2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 ZNF501Q96CX3 271 aaPredicted RBP2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 DTNBP1Q96EV8 351 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 IMP4Q96G21 291 aaKnown RBP2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 VPS39Q96JC1 886 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 ZNF514Q96K75 400 aaPredicted RBP2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 OLFM3Q96PB7 478 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 RAB40CQ96S21 281 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 KRT12Q99456 494 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 GPA33Q99795 319 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 OVOL2Q9BRP0 275 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 ZNF670Q9BS34 389 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 DCTN5Q9BTE1 182 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 NDUFAF3Q9BU61 184 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 FICDQ9BVA6 458 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 RIOK2Q9BVS4 552 aaKnown RBP2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 NUDT9Q9BW91 350 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 RAB11FIP5Q9BXF6 653 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 PINK1Q9BXM7 581 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 POLR1EQ9GZS1 481 aaKnown RBP2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 CHRNA10Q9GZZ6 450 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 CXXC4Q9H2H0 198 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 RIBC2Q9H4K1 309 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 DHX35Q9H5Z1 703 aaKnown RBP2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 LHX9Q9NQ69 397 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 PARVAQ9NVD7 372 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 AIPL1Q9NZN9 384 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 KLK11Q9UBX7 282 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 CD84Q9UIB8 345 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 LNPEPQ9UIQ6 1025 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 PLCL2Q9UPR0 1127 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 NTNG1Q9Y2I2 539 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 TRRAPQ9Y4A5 3859 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 PRRC2AP48634 2157 aaKnown RBP2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 CNTRLQ7Z7A1 2325 aa2.07□□□□□ -2.08
SMARCB1-208ENST00000634926 TENM1Q9UKZ4 2725 aa2.06□□□□□ -2.08
SMARCB1-208ENST00000634926 SVILO95425 2214 aa2.06□□□□□ -2.08
SMARCB1-208ENST00000634926 IGLV3-16A0A075B6K0 115 aa2.06□□□□□ -2.08
SMARCB1-208ENST00000634926 C1orf232A0A0U1RR37 186 aa2.06□□□□□ -2.08
SMARCB1-208ENST00000634926 LOC285095A0A1B0GVY8 99 aa2.06□□□□□ -2.08
SMARCB1-208ENST00000634926 OR5K4A6NMS3 321 aa2.06□□□□□ -2.08
SMARCB1-208ENST00000634926 OR52A4PA6NMU1 304 aa2.06□□□□□ -2.08
SMARCB1-208ENST00000634926 A8MU76 341 aa2.06□□□□□ -2.08
SMARCB1-208ENST00000634926 A8MX80 341 aa2.06□□□□□ -2.08
SMARCB1-208ENST00000634926 NPIPB9F8W1W9 429 aa2.06□□□□□ -2.08
SMARCB1-208ENST00000634926 SGK494L7N484 410 aa2.06□□□□□ -2.08
SMARCB1-208ENST00000634926 LGALS8O00214 317 aa2.06□□□□□ -2.08
SMARCB1-208ENST00000634926 DFFAO00273 331 aa2.06□□□□□ -2.08
SMARCB1-208ENST00000634926 ZNF195O14628 629 aa2.06□□□□□ -2.08
SMARCB1-208ENST00000634926 KMOO15229 486 aa2.06□□□□□ -2.08
SMARCB1-208ENST00000634926 INPP4BO15327 924 aa2.06□□□□□ -2.08
SMARCB1-208ENST00000634926 ZW10O43264 779 aa2.06□□□□□ -2.08
SMARCB1-208ENST00000634926 TNFSF12O43508 249 aa2.06□□□□□ -2.08
SMARCB1-208ENST00000634926 HCRTR1O43613 425 aa2.06□□□□□ -2.08
SMARCB1-208ENST00000634926 TSPAN2O60636 221 aa2.06□□□□□ -2.08
SMARCB1-208ENST00000634926 VPS26AO75436 327 aa2.06□□□□□ -2.08
SMARCB1-208ENST00000634926 MTRF1O75570 445 aaKnown RBP2.06□□□□□ -2.08
SMARCB1-208ENST00000634926 FCER2P06734 321 aa2.06□□□□□ -2.08
SMARCB1-208ENST00000634926 LYNP07948 512 aa2.06□□□□□ -2.08
SMARCB1-208ENST00000634926 PATE4P0C8F1 98 aa2.06□□□□□ -2.08
SMARCB1-208ENST00000634926 RRASP10301 218 aa2.06□□□□□ -2.08
SMARCB1-208ENST00000634926 ZNF7P17097 686 aaPredicted RBP2.06□□□□□ -2.08
SMARCB1-208ENST00000634926 CCNCP24863 283 aa2.06□□□□□ -2.08
SMARCB1-208ENST00000634926 PSMA2P25787 234 aa2.06□□□□□ -2.08
SMARCB1-208ENST00000634926 PTPN6P29350 595 aa2.06□□□□□ -2.08
SMARCB1-208ENST00000634926 HMGCLP35914 325 aa2.06□□□□□ -2.08
SMARCB1-208ENST00000634926 GPR1P46091 355 aa2.06□□□□□ -2.08
SMARCB1-208ENST00000634926 ZFP36L2P47974 494 aaKnown RBP2.06□□□□□ -2.08
SMARCB1-208ENST00000634926 TRPC1P48995 793 aa2.06□□□□□ -2.08
SMARCB1-208ENST00000634926 NPY2RP49146 381 aa2.06□□□□□ -2.08
SMARCB1-208ENST00000634926 TDGF1P3P51864 188 aa2.06□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms