RNA–Protein interactions for RNA: ENST00000564628.1

NME3-207, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-207ENST00000564628 TRMT61AQ96FX7 289 aaKnown RBP16.68■□□□□ 0.26
NME3-207ENST00000564628 TMEM43Q9BTV4 400 aa16.68■□□□□ 0.26
NME3-207ENST00000564628 TAPBPLQ9BX59 468 aa16.68■□□□□ 0.26
NME3-207ENST00000564628 HDHD5Q9BXW7 423 aa16.68■□□□□ 0.26
NME3-207ENST00000564628 CD300AQ9UGN4 299 aa16.68■□□□□ 0.26
NME3-207ENST00000564628 SLC7A8Q9UHI5 535 aa16.68■□□□□ 0.26
NME3-207ENST00000564628 PRR14LQ5THK1 2151 aa16.68■□□□□ 0.26
NME3-207ENST00000564628 RNF223E7ERA6 249 aa16.67■□□□□ 0.26
NME3-207ENST00000564628 CXCR6O00574 342 aa16.67■□□□□ 0.26
NME3-207ENST00000564628 GPR171O14626 319 aa16.67■□□□□ 0.26
NME3-207ENST00000564628 CHP2O43745 196 aa16.67■□□□□ 0.26
NME3-207ENST00000564628 AKR7A3O95154 331 aa16.67■□□□□ 0.26
NME3-207ENST00000564628 NTF4P34130 210 aa16.67■□□□□ 0.26
NME3-207ENST00000564628 TRIM25Q14258 630 aaKnown RBP16.67■□□□□ 0.26
NME3-207ENST00000564628 FXNQ16595 210 aa16.67■□□□□ 0.26
NME3-207ENST00000564628 OTUD3Q5T2D3 398 aaPredicted RBP16.67■□□□□ 0.26
NME3-207ENST00000564628 ADAMTS16Q8TE57 1224 aa16.67■□□□□ 0.26
NME3-207ENST00000564628 TAAR8Q969N4 342 aa16.67■□□□□ 0.26
NME3-207ENST00000564628 CLPTM1LQ96KA5 538 aa16.67■□□□□ 0.26
NME3-207ENST00000564628 ZNF426Q9BUY5 554 aa16.67■□□□□ 0.26
NME3-207ENST00000564628 SF3B5Q9BWJ5 86 aaKnown RBP16.67■□□□□ 0.26
NME3-207ENST00000564628 MUC13Q9H3R2 512 aa16.67■□□□□ 0.26
NME3-207ENST00000564628 SELENONQ9NZV5 590 aa16.67■□□□□ 0.26
NME3-207ENST00000564628 SH3GLB1Q9Y371 365 aa16.67■□□□□ 0.26
NME3-207ENST00000564628 RNF115Q9Y4L5 304 aa16.67■□□□□ 0.26
NME3-207ENST00000564628 FLVCR1Q9Y5Y0 555 aa16.67■□□□□ 0.26
NME3-207ENST00000564628 SONP18583 2426 aaKnown RBP16.66■□□□□ 0.26
NME3-207ENST00000564628 TRAV36DV7A0A075B6V5 113 aa16.66■□□□□ 0.26
NME3-207ENST00000564628 TRAPPC13A5PLN9 417 aa16.66■□□□□ 0.26
NME3-207ENST00000564628 CPSF4LA6NMK7 179 aaKnown RBP16.66■□□□□ 0.26
NME3-207ENST00000564628 OR2T1O43869 369 aa16.66■□□□□ 0.26
NME3-207ENST00000564628 GMNNO75496 209 aa16.66■□□□□ 0.26
NME3-207ENST00000564628 TNFRSF1BP20333 461 aa16.66■□□□□ 0.26
NME3-207ENST00000564628 RPS5P46782 204 aaKnown RBP16.66■□□□□ 0.26
NME3-207ENST00000564628 SELENOWP63302 87 aa16.66■□□□□ 0.26
NME3-207ENST00000564628 TRAP1Q12931 704 aaKnown RBP16.66■□□□□ 0.26
NME3-207ENST00000564628 FAM69AQ5T7M9 428 aa16.66■□□□□ 0.26
NME3-207ENST00000564628 C1orf146Q5VVC0 180 aa16.66■□□□□ 0.26
NME3-207ENST00000564628 WDR88Q6ZMY6 472 aa16.66■□□□□ 0.26
NME3-207ENST00000564628 LILRB1Q8NHL6 650 aaPredicted RBP16.66■□□□□ 0.26
NME3-207ENST00000564628 FBXW5Q969U6 566 aa16.66■□□□□ 0.26
NME3-207ENST00000564628 S100PBPQ96BU1 408 aa16.66■□□□□ 0.26
NME3-207ENST00000564628 ZNF775Q96BV0 537 aaPredicted RBP16.66■□□□□ 0.26
NME3-207ENST00000564628 KCTD14Q9BQ13 255 aaPredicted RBP16.66■□□□□ 0.26
NME3-207ENST00000564628 REG4Q9BYZ8 158 aa16.66■□□□□ 0.26
NME3-207ENST00000564628 POLR2J2Q9GZM3 115 aaKnown RBP16.66■□□□□ 0.26
NME3-207ENST00000564628 POLR2J3Q9H1A7 115 aaKnown RBP16.66■□□□□ 0.26
NME3-207ENST00000564628 ADPRHL2Q9NX46 363 aa16.66■□□□□ 0.26
NME3-207ENST00000564628 ANK3Q12955 4377 aaKnown RBP16.66■□□□□ 0.26
NME3-207ENST00000564628 TLX2O43763 284 aaPredicted RBP16.65■□□□□ 0.26
NME3-207ENST00000564628 PDE5AO76074 875 aa16.65■□□□□ 0.26
NME3-207ENST00000564628 VAMP5O95183 116 aa16.65■□□□□ 0.26
NME3-207ENST00000564628 DANCRP0C864 163 aa16.65■□□□□ 0.26
NME3-207ENST00000564628 GGT1P19440 569 aa16.65■□□□□ 0.26
NME3-207ENST00000564628 NCMAPQ5T1S8 102 aa16.65■□□□□ 0.26
NME3-207ENST00000564628 Q6ZT83 130 aa16.65■□□□□ 0.26
NME3-207ENST00000564628 CBLL1Q75N03 491 aa16.65■□□□□ 0.26
NME3-207ENST00000564628 RNF148Q8N7C7 305 aa16.65■□□□□ 0.26
NME3-207ENST00000564628 ZIC4Q8N9L1 334 aa16.65■□□□□ 0.26
NME3-207ENST00000564628 OR9K2Q8NGE7 335 aa16.65■□□□□ 0.26
NME3-207ENST00000564628 TMEM45BQ96B21 275 aa16.65■□□□□ 0.26
NME3-207ENST00000564628 ASB9Q96DX5 294 aa16.65■□□□□ 0.26
NME3-207ENST00000564628 EPYCQ99645 322 aa16.65■□□□□ 0.26
NME3-207ENST00000564628 USB1Q9BQ65 265 aaKnown RBP16.65■□□□□ 0.26
NME3-207ENST00000564628 ESRP2Q9H6T0 727 aaKnown RBP16.65■□□□□ 0.26
NME3-207ENST00000564628 NGBQ9NPG2 151 aa16.65■□□□□ 0.26
NME3-207ENST00000564628 PRSS50Q9UI38 385 aa16.65■□□□□ 0.26
NME3-207ENST00000564628 POMPQ9Y244 141 aa16.65■□□□□ 0.26
NME3-207ENST00000564628 NOSIPQ9Y314 301 aaKnown RBP16.65■□□□□ 0.26
NME3-207ENST00000564628 BGLAPP02818 100 aa16.64■□□□□ 0.25
NME3-207ENST00000564628 TP53P04637 393 aaPredicted RBP16.64■□□□□ 0.25
NME3-207ENST00000564628 SOD3P08294 240 aa16.64■□□□□ 0.25
NME3-207ENST00000564628 P2RY6Q15077 328 aa16.64■□□□□ 0.25
NME3-207ENST00000564628 PODNL1Q6PEZ8 512 aa16.64■□□□□ 0.25
NME3-207ENST00000564628 MAPK1IP1LQ8NDC0 245 aa16.64■□□□□ 0.25
NME3-207ENST00000564628 ADPRHL1Q8NDY3 354 aa16.64■□□□□ 0.25
NME3-207ENST00000564628 LZICQ8WZA0 190 aa16.64■□□□□ 0.25
NME3-207ENST00000564628 HSD17B8Q92506 261 aa16.64■□□□□ 0.25
NME3-207ENST00000564628 SLC41A3Q96GZ6 507 aa16.64■□□□□ 0.25
NME3-207ENST00000564628 MPP4Q96JB8 637 aa16.64■□□□□ 0.25
NME3-207ENST00000564628 PRSS27Q9BQR3 290 aa16.64■□□□□ 0.25
NME3-207ENST00000564628 RASD1Q9Y272 281 aa16.64■□□□□ 0.25
NME3-207ENST00000564628 GSTA4O15217 222 aa16.63■□□□□ 0.25
NME3-207ENST00000564628 CD5LO43866 347 aa16.63■□□□□ 0.25
NME3-207ENST00000564628 OR5F1O95221 314 aa16.63■□□□□ 0.25
NME3-207ENST00000564628 IFNA2P01563 188 aa16.63■□□□□ 0.25
NME3-207ENST00000564628 CD3EP07766 207 aa16.63■□□□□ 0.25
NME3-207ENST00000564628 TCN1P20061 433 aaPredicted RBP16.63■□□□□ 0.25
NME3-207ENST00000564628 COX5AP20674 150 aa16.63■□□□□ 0.25
NME3-207ENST00000564628 GRPRP30550 384 aa16.63■□□□□ 0.25
NME3-207ENST00000564628 OR1E2P47887 323 aa16.63■□□□□ 0.25
NME3-207ENST00000564628 ELF3P78545 371 aaPredicted RBP16.63■□□□□ 0.25
NME3-207ENST00000564628 MFSD13AQ14CX5 517 aa16.63■□□□□ 0.25
NME3-207ENST00000564628 SFRP5Q5T4F7 317 aa16.63■□□□□ 0.25
NME3-207ENST00000564628 HMBOX1Q6NT76 420 aa16.63■□□□□ 0.25
NME3-207ENST00000564628 DNM1P46Q6ZS02 220 aa16.63■□□□□ 0.25
NME3-207ENST00000564628 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.63■□□□□ 0.25
NME3-207ENST00000564628 VTCN1Q7Z7D3 282 aa16.63■□□□□ 0.25
NME3-207ENST00000564628 DHFR2Q86XF0 187 aa16.63■□□□□ 0.25
NME3-207ENST00000564628 HIPK1Q86Z02 1210 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms