RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 ARHGEF11O15085 1522 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 NCAPD3P42695 1498 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 IGLV3-22A0A075B6J6 115 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 TSPAN13O95857 204 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 CCNB1P14635 433 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 ABOP16442 354 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 CMA1P23946 247 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 NAA10P41227 235 aaPredicted RBP1.89□□□□□ -2.11
CHD9-209ENST00000564255 IRX3P78415 501 aaPredicted RBP1.89□□□□□ -2.11
CHD9-209ENST00000564255 MRPS22P82650 360 aaKnown RBP1.89□□□□□ -2.11
CHD9-209ENST00000564255 ZNF658Q5TYW1 1059 aaPredicted RBP1.89□□□□□ -2.11
CHD9-209ENST00000564255 C1orf94Q6P1W5 598 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 CCDC73Q6ZRK6 1079 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 C19orf35Q6ZS72 473 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 NIPA1Q7RTP0 329 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 FAM220AQ7Z4H9 259 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 SLC26A11Q86WA9 606 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 CDC20BQ86Y33 519 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 KATNAL2Q8IYT4 538 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 MS4A15Q8N5U1 240 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 TMEM252Q8N6L7 170 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 FAM184AQ8NB25 1140 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 OR51S1Q8NGJ8 323 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 OR52K1Q8NGK4 314 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 C7orf33Q8WU49 177 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 SORT1Q99523 831 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 KCTD14Q9BQ13 255 aaPredicted RBP1.89□□□□□ -2.11
CHD9-209ENST00000564255 DEFB126Q9BYW3 111 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 GPATCH2LQ9NWQ4 482 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 IGHV3OR16-13A0A075B7E8 117 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 TRAV25A0A0B4J276 109 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 A0A1B0GTQ1 180 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 H0YC42 278 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 MRPS12O15235 138 aaKnown RBP1.89□□□□□ -2.11
CHD9-209ENST00000564255 SOX15O60248 233 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 ZNF780AO75290 641 aaPredicted RBP1.89□□□□□ -2.11
CHD9-209ENST00000564255 CCDC166P0CW27 439 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 ATP6V1B2P21281 511 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 CCT6AP40227 531 aaKnown RBP1.89□□□□□ -2.11
CHD9-209ENST00000564255 NAMPTP43490 491 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 SLC26A2P50443 739 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 GPM6AP51674 278 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 ZNF45Q02386 682 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 MRPL23Q16540 153 aaKnown RBP1.89□□□□□ -2.11
CHD9-209ENST00000564255 LY6G6FQ5SQ64 297 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 C1orf100Q5SVJ3 147 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 PIP5KL1Q5T9C9 394 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 MARC1Q5VT66 337 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 HSD17B13Q7Z5P4 300 aaPredicted RBP1.89□□□□□ -2.11
CHD9-209ENST00000564255 PLA2G4DQ86XP0 818 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 GABRG1Q8N1C3 465 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 FNDC5Q8NAU1 212 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 ZNF485Q8NCK3 441 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 FBXL13Q8NEE6 735 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 OR1S2Q8NGQ3 325 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 GLYATL2Q8WU03 294 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 STMN2Q93045 179 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 BCL7BQ9BQE9 202 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 RIOK2Q9BVS4 552 aaKnown RBP1.89□□□□□ -2.11
CHD9-209ENST00000564255 UBXN6Q9BZV1 441 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 GBA3Q9H227 469 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 OR51M1Q9H341 326 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 EHD1Q9H4M9 534 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 C20orf96Q9NUD7 363 aaPredicted RBP1.89□□□□□ -2.11
CHD9-209ENST00000564255 LYARQ9NX58 379 aaKnown RBP1.89□□□□□ -2.11
CHD9-209ENST00000564255 PEF1Q9UBV8 284 aaKnown RBP1.89□□□□□ -2.11
CHD9-209ENST00000564255 PDS5BQ9NTI5 1447 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 RALGAPA1Q6GYQ0 2036 aa1.89□□□□□ -2.11
CHD9-209ENST00000564255 OR2J3O76001 311 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 SNAPINO95295 136 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 RALBP11234 206 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 CXCR2P25025 360 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 STOMP27105 288 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 ARRB1P49407 418 aaPredicted RBP1.88□□□□□ -2.11
CHD9-209ENST00000564255 P2RY4P51582 365 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 CLDN8P56748 225 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 ERVK-25P63136 954 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 HSDL1Q3SXM5 330 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 MARCH8Q5T0T0 291 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 CASC10Q5T4H9 136 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 TIGD3Q6B0B8 471 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 TRIM40Q6P9F5 258 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 ZNF836Q6ZNA1 936 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 ASCL5Q7RTU5 278 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 ZNF546Q86UE3 836 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 SLC39A11Q8N1S5 342 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 OR4A4PQ8NGN8 299 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 RHOXF1Q8NHV9 184 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 PIBF1Q8WXW3 757 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 C8orf44Q96CB5 159 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 SMIM14Q96QK8 99 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 ARHGDIGQ99819 225 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 ANKRD60Q9BZ19 345 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 CWH43Q9H720 699 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 ISG20L2Q9H9L3 353 aaKnown RBP1.88□□□□□ -2.11
CHD9-209ENST00000564255 FANCEQ9HB96 536 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 TMEM165Q9HC07 324 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 IL26Q9NPH9 171 aa1.88□□□□□ -2.11
CHD9-209ENST00000564255 RPRD1BQ9NQG5 326 aaKnown RBP1.88□□□□□ -2.11
CHD9-209ENST00000564255 MARCH5Q9NX47 278 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms