RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 KIF17Q9P2E2 1029 aa14.64□□□□□ -0.07
SPTLC2-203ENST00000554901 ZNF629Q9UEG4 869 aaPredicted RBP14.64□□□□□ -0.07
SPTLC2-203ENST00000554901 ENOPH1Q9UHY7 261 aa14.64□□□□□ -0.07
SPTLC2-203ENST00000554901 ING1Q9UK53 422 aaPredicted RBP14.64□□□□□ -0.07
SPTLC2-203ENST00000554901 EMC9Q9Y3B6 208 aa14.64□□□□□ -0.07
SPTLC2-203ENST00000554901 FLVCR1Q9Y5Y0 555 aa14.64□□□□□ -0.07
SPTLC2-203ENST00000554901 KIAA1549Q9HCM3 1950 aa14.64□□□□□ -0.07
SPTLC2-203ENST00000554901 TRAV27A0A087WT01 109 aa14.63□□□□□ -0.07
SPTLC2-203ENST00000554901 LRRTM2O43300 516 aa14.63□□□□□ -0.07
SPTLC2-203ENST00000554901 RNF13O43567 381 aa14.63□□□□□ -0.07
SPTLC2-203ENST00000554901 AKAP8O43823 692 aaKnown RBP14.63□□□□□ -0.07
SPTLC2-203ENST00000554901 TMIGD3P0DMS9 266 aaPredicted RBP14.63□□□□□ -0.07
SPTLC2-203ENST00000554901 PRKACGP22612 351 aa14.63□□□□□ -0.07
SPTLC2-203ENST00000554901 AHCYP23526 432 aa14.63□□□□□ -0.07
SPTLC2-203ENST00000554901 CTSSP25774 331 aa14.63□□□□□ -0.07
SPTLC2-203ENST00000554901 AQP2P41181 271 aa14.63□□□□□ -0.07
SPTLC2-203ENST00000554901 C1DQ13901 141 aaKnown RBP14.63□□□□□ -0.07
SPTLC2-203ENST00000554901 ALG10Q5BKT4 473 aa14.63□□□□□ -0.07
SPTLC2-203ENST00000554901 TMEM201Q5SNT2 666 aa14.63□□□□□ -0.07
SPTLC2-203ENST00000554901 SMARCD3Q6STE5 483 aa14.63□□□□□ -0.07
SPTLC2-203ENST00000554901 PLXDC2Q6UX71 529 aa14.63□□□□□ -0.07
SPTLC2-203ENST00000554901 ZNF620Q6ZNG0 422 aa14.63□□□□□ -0.07
SPTLC2-203ENST00000554901 CREB3L2Q70SY1 520 aa14.63□□□□□ -0.07
SPTLC2-203ENST00000554901 GALNT5Q7Z7M9 940 aa14.63□□□□□ -0.07
SPTLC2-203ENST00000554901 MEX3DQ86XN8 651 aaKnown RBP14.63□□□□□ -0.07
SPTLC2-203ENST00000554901 PARP8Q8N3A8 854 aa14.63□□□□□ -0.07
SPTLC2-203ENST00000554901 GTPBP3Q969Y2 492 aaKnown RBP14.63□□□□□ -0.07
SPTLC2-203ENST00000554901 TMEM45BQ96B21 275 aa14.63□□□□□ -0.07
SPTLC2-203ENST00000554901 GPX7Q96SL4 187 aaPredicted RBP14.63□□□□□ -0.07
SPTLC2-203ENST00000554901 RBM4BQ9BQ04 359 aaKnown RBP14.63□□□□□ -0.07
SPTLC2-203ENST00000554901 RBM4Q9BWF3 364 aaKnown RBP14.63□□□□□ -0.07
SPTLC2-203ENST00000554901 RNPEPL1Q9HAU8 725 aa14.63□□□□□ -0.07
SPTLC2-203ENST00000554901 MCCC2Q9HCC0 563 aa14.63□□□□□ -0.07
SPTLC2-203ENST00000554901 C8orf4Q9NR00 106 aa14.63□□□□□ -0.07
SPTLC2-203ENST00000554901 INIPQ9NRY2 104 aa14.63□□□□□ -0.07
SPTLC2-203ENST00000554901 PARPBPQ9NWS1 579 aa14.63□□□□□ -0.07
SPTLC2-203ENST00000554901 SLC5A6Q9Y289 635 aa14.63□□□□□ -0.07
SPTLC2-203ENST00000554901 POFUT2Q9Y2G5 429 aa14.63□□□□□ -0.07
SPTLC2-203ENST00000554901 MAGED1Q9Y5V3 778 aaPredicted RBP14.63□□□□□ -0.07
SPTLC2-203ENST00000554901 SAC3D1A6NKF1 404 aa14.62□□□□□ -0.07
SPTLC2-203ENST00000554901 HPRP00739 348 aa14.62□□□□□ -0.07
SPTLC2-203ENST00000554901 POU2F1P14859 743 aa14.62□□□□□ -0.07
SPTLC2-203ENST00000554901 AGTR1P30556 359 aa14.62□□□□□ -0.07
SPTLC2-203ENST00000554901 OPRM1P35372 400 aa14.62□□□□□ -0.07
SPTLC2-203ENST00000554901 PPP2R2BQ00005 443 aa14.62□□□□□ -0.07
SPTLC2-203ENST00000554901 NHLRC1Q6VVB1 395 aa14.62□□□□□ -0.07
SPTLC2-203ENST00000554901 HDDC2Q7Z4H3 204 aa14.62□□□□□ -0.07
SPTLC2-203ENST00000554901 FJX1Q86VR8 437 aa14.62□□□□□ -0.07
SPTLC2-203ENST00000554901 EPHX4Q8IUS5 362 aa14.62□□□□□ -0.07
SPTLC2-203ENST00000554901 LRRC75AQ8NAA5 344 aa14.62□□□□□ -0.07
SPTLC2-203ENST00000554901 OR6K3Q8NGY3 331 aa14.62□□□□□ -0.07
SPTLC2-203ENST00000554901 EME1Q96AY2 570 aa14.62□□□□□ -0.07
SPTLC2-203ENST00000554901 INTS12Q96CB8 462 aaKnown RBP14.62□□□□□ -0.07
SPTLC2-203ENST00000554901 CIB1Q99828 191 aa14.62□□□□□ -0.07
SPTLC2-203ENST00000554901 NIPSNAP1Q9BPW8 284 aa14.62□□□□□ -0.07
SPTLC2-203ENST00000554901 USE1Q9NZ43 259 aa14.62□□□□□ -0.07
SPTLC2-203ENST00000554901 RCE1Q9Y256 329 aa14.62□□□□□ -0.07
SPTLC2-203ENST00000554901 CDH10Q9Y6N8 788 aa14.62□□□□□ -0.07
SPTLC2-203ENST00000554901 ARHGAP21Q5T5U3 1957 aa14.62□□□□□ -0.07
SPTLC2-203ENST00000554901 MYO18BQ8IUG5 2567 aa14.62□□□□□ -0.07
SPTLC2-203ENST00000554901 A0A1W2PRG6 482 aa14.61□□□□□ -0.07
SPTLC2-203ENST00000554901 CASQ2O14958 399 aaPredicted RBP14.61□□□□□ -0.07
SPTLC2-203ENST00000554901 TRAF3IP2O43734 574 aaPredicted RBP14.61□□□□□ -0.07
SPTLC2-203ENST00000554901 IGHMP01871 453 aa14.61□□□□□ -0.07
SPTLC2-203ENST00000554901 APEHP13798 732 aaKnown RBP14.61□□□□□ -0.07
SPTLC2-203ENST00000554901 DAPP51397 102 aa14.61□□□□□ -0.07
SPTLC2-203ENST00000554901 DAP3P51398 398 aaKnown RBP14.61□□□□□ -0.07
SPTLC2-203ENST00000554901 SMSP52788 366 aa14.61□□□□□ -0.07
SPTLC2-203ENST00000554901 IL1RL1Q01638 556 aa14.61□□□□□ -0.07
SPTLC2-203ENST00000554901 POU3F1Q03052 451 aaPredicted RBP14.61□□□□□ -0.07
SPTLC2-203ENST00000554901 RFX4Q33E94 735 aa14.61□□□□□ -0.07
SPTLC2-203ENST00000554901 KDM4DQ6B0I6 523 aa14.61□□□□□ -0.07
SPTLC2-203ENST00000554901 KLHL17Q6TDP4 642 aa14.61□□□□□ -0.07
SPTLC2-203ENST00000554901 DPY19L2P2Q6ZN68 376 aa14.61□□□□□ -0.07
SPTLC2-203ENST00000554901 TUSC5Q8IXB3 177 aa14.61□□□□□ -0.07
SPTLC2-203ENST00000554901 GCNT2Q8N0V5 402 aa14.61□□□□□ -0.07
SPTLC2-203ENST00000554901 KDM8Q8N371 416 aa14.61□□□□□ -0.07
SPTLC2-203ENST00000554901 ZIC4Q8N9L1 334 aa14.61□□□□□ -0.07
SPTLC2-203ENST00000554901 MOSPD2Q8NHP6 518 aa14.61□□□□□ -0.07
SPTLC2-203ENST00000554901 FANK1Q8TC84 345 aa14.61□□□□□ -0.07
SPTLC2-203ENST00000554901 ADAD1Q96M93 576 aaKnown RBP14.61□□□□□ -0.07
SPTLC2-203ENST00000554901 OR52D1Q9H346 318 aa14.61□□□□□ -0.07
SPTLC2-203ENST00000554901 PAPOLBQ9NRJ5 636 aaKnown RBP14.61□□□□□ -0.07
SPTLC2-203ENST00000554901 NOSIPQ9Y314 301 aaKnown RBP14.61□□□□□ -0.07
SPTLC2-203ENST00000554901 DOCK7Q96N67 2140 aa14.61□□□□□ -0.07
SPTLC2-203ENST00000554901 HIVEP3Q5T1R4 2406 aa14.61□□□□□ -0.07
SPTLC2-203ENST00000554901 A0A0G2JNJ9 132 aa14.61□□□□□ -0.07
SPTLC2-203ENST00000554901 C11orf98E9PRG8 122 aa14.61□□□□□ -0.07
SPTLC2-203ENST00000554901 TNFSF13O75888 250 aa14.61□□□□□ -0.07
SPTLC2-203ENST00000554901 CD14P08571 375 aa14.61□□□□□ -0.07
SPTLC2-203ENST00000554901 OSMP13725 252 aa14.61□□□□□ -0.07
SPTLC2-203ENST00000554901 PLA2G2AP14555 144 aa14.61□□□□□ -0.07
SPTLC2-203ENST00000554901 ZNF26P17031 533 aaPredicted RBP14.61□□□□□ -0.07
SPTLC2-203ENST00000554901 AGAP20933 346 aa14.61□□□□□ -0.07
SPTLC2-203ENST00000554901 SLC6A6P31641 620 aa14.61□□□□□ -0.07
SPTLC2-203ENST00000554901 KIR2DL2P43627 348 aaPredicted RBP14.61□□□□□ -0.07
SPTLC2-203ENST00000554901 SLC34A1Q06495 639 aa14.61□□□□□ -0.07
SPTLC2-203ENST00000554901 DAG1Q14118 895 aa14.61□□□□□ -0.07
SPTLC2-203ENST00000554901 FAM205BPQ63HN1 556 aa14.61□□□□□ -0.07
SPTLC2-203ENST00000554901 ZBTB49Q6ZSB9 765 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms