RNA–Protein interactions for RNA: ENST00000554774.1

XRCC3-207, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 510 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-207ENST00000554774 GIFP27352 417 aa12.13□□□□□ -0.47
XRCC3-207ENST00000554774 APEX1P27695 318 aaKnown RBP12.13□□□□□ -0.47
XRCC3-207ENST00000554774 IL2RGP31785 369 aa12.13□□□□□ -0.47
XRCC3-207ENST00000554774 ARR3P36575 388 aa12.13□□□□□ -0.47
XRCC3-207ENST00000554774 ADRM1Q16186 407 aa12.13□□□□□ -0.47
XRCC3-207ENST00000554774 C6orf10Q5SRN2 563 aa12.13□□□□□ -0.47
XRCC3-207ENST00000554774 MDP1Q86V88 176 aa12.13□□□□□ -0.47
XRCC3-207ENST00000554774 ANKK1Q8NFD2 765 aa12.13□□□□□ -0.47
XRCC3-207ENST00000554774 VPS33AQ96AX1 596 aa12.13□□□□□ -0.47
XRCC3-207ENST00000554774 ZNF837Q96EG3 531 aaPredicted RBP12.13□□□□□ -0.47
XRCC3-207ENST00000554774 CRLF2Q9HC73 371 aa12.13□□□□□ -0.47
XRCC3-207ENST00000554774 THAP1Q9NVV9 213 aa12.13□□□□□ -0.47
XRCC3-207ENST00000554774 THUMPD1Q9NXG2 353 aaKnown RBP12.13□□□□□ -0.47
XRCC3-207ENST00000554774 B3GAT1Q9P2W7 334 aa12.13□□□□□ -0.47
XRCC3-207ENST00000554774 TMEM129A0AVI4 362 aa12.12□□□□□ -0.47
XRCC3-207ENST00000554774 ZNF503-AS2A6NEH8 195 aa12.12□□□□□ -0.47
XRCC3-207ENST00000554774 C5orf58C9J3I9 102 aa12.12□□□□□ -0.47
XRCC3-207ENST00000554774 SLCO1B7G3V0H7 640 aa12.12□□□□□ -0.47
XRCC3-207ENST00000554774 M0R082 166 aa12.12□□□□□ -0.47
XRCC3-207ENST00000554774 AKAP8O43823 692 aaKnown RBP12.12□□□□□ -0.47
XRCC3-207ENST00000554774 LILRA1O75019 489 aa12.12□□□□□ -0.47
XRCC3-207ENST00000554774 CBLP22681 906 aa12.12□□□□□ -0.47
XRCC3-207ENST00000554774 GRPRP30550 384 aa12.12□□□□□ -0.47
XRCC3-207ENST00000554774 SRP14P37108 136 aaKnown RBP12.12□□□□□ -0.47
XRCC3-207ENST00000554774 POLR2JP52435 117 aaKnown RBP12.12□□□□□ -0.47
XRCC3-207ENST00000554774 SNTB2Q13425 540 aaKnown RBP12.12□□□□□ -0.47
XRCC3-207ENST00000554774 DAG1Q14118 895 aa12.12□□□□□ -0.47
XRCC3-207ENST00000554774 SLC9B1Q4ZJI4 515 aa12.12□□□□□ -0.47
XRCC3-207ENST00000554774 TNFAIP8L3Q5GJ75 292 aa12.12□□□□□ -0.47
XRCC3-207ENST00000554774 CARD17Q5XLA6 110 aa12.12□□□□□ -0.47
XRCC3-207ENST00000554774 KRT80Q6KB66 452 aa12.12□□□□□ -0.47
XRCC3-207ENST00000554774 MSANTD1Q6ZTZ1 278 aa12.12□□□□□ -0.47
XRCC3-207ENST00000554774 CDK20Q8IZL9 346 aa12.12□□□□□ -0.47
XRCC3-207ENST00000554774 ZNF786Q8N393 782 aa12.12□□□□□ -0.47
XRCC3-207ENST00000554774 LINC01356Q8N9X3 169 aa12.12□□□□□ -0.47
XRCC3-207ENST00000554774 PIK3C3Q8NEB9 887 aa12.12□□□□□ -0.47
XRCC3-207ENST00000554774 BBS10Q8TAM1 723 aa12.12□□□□□ -0.47
XRCC3-207ENST00000554774 ZNF417Q8TAU3 575 aa12.12□□□□□ -0.47
XRCC3-207ENST00000554774 MGARPQ8TDB4 240 aa12.12□□□□□ -0.47
XRCC3-207ENST00000554774 UBASH3BQ8TF42 649 aa12.12□□□□□ -0.47
XRCC3-207ENST00000554774 CKAP2Q8WWK9 683 aa12.12□□□□□ -0.47
XRCC3-207ENST00000554774 SLC38A4Q969I6 547 aa12.12□□□□□ -0.47
XRCC3-207ENST00000554774 MAL2Q969L2 176 aa12.12□□□□□ -0.47
XRCC3-207ENST00000554774 TAAR8Q969N4 342 aa12.12□□□□□ -0.47
XRCC3-207ENST00000554774 SNX18Q96RF0 628 aa12.12□□□□□ -0.47
XRCC3-207ENST00000554774 ZNF587Q96SQ5 575 aaPredicted RBP12.12□□□□□ -0.47
XRCC3-207ENST00000554774 TPK1Q9H3S4 243 aa12.12□□□□□ -0.47
XRCC3-207ENST00000554774 NOX3Q9HBY0 568 aa12.12□□□□□ -0.47
XRCC3-207ENST00000554774 ZIM2Q9NZV7 527 aa12.12□□□□□ -0.47
XRCC3-207ENST00000554774 TMEFF2Q9UIK5 374 aaPredicted RBP12.12□□□□□ -0.47
XRCC3-207ENST00000554774 USP22Q9UPT9 525 aa12.12□□□□□ -0.47
XRCC3-207ENST00000554774 PCDHB14Q9Y5E9 798 aa12.12□□□□□ -0.47
XRCC3-207ENST00000554774 LYNX1G3V0Z9 82 aa12.11□□□□□ -0.47
XRCC3-207ENST00000554774 M0R3G1 203 aa12.11□□□□□ -0.47
XRCC3-207ENST00000554774 TCF21O43680 179 aa12.11□□□□□ -0.47
XRCC3-207ENST00000554774 OR2T1O43869 369 aa12.11□□□□□ -0.47
XRCC3-207ENST00000554774 SNNO75324 88 aaPredicted RBP12.11□□□□□ -0.47
XRCC3-207ENST00000554774 ADRA2AP08913 450 aa12.11□□□□□ -0.47
XRCC3-207ENST00000554774 TACSTD2P09758 323 aa12.11□□□□□ -0.47
XRCC3-207ENST00000554774 LYNX1P0DP58 116 aa12.11□□□□□ -0.47
XRCC3-207ENST00000554774 IFNGR1P15260 489 aa12.11□□□□□ -0.47
XRCC3-207ENST00000554774 WDR4P57081 412 aaKnown RBP12.11□□□□□ -0.47
XRCC3-207ENST00000554774 RGNQ15493 299 aa12.11□□□□□ -0.47
XRCC3-207ENST00000554774 TRIP10Q15642 601 aa12.11□□□□□ -0.47
XRCC3-207ENST00000554774 FAM69AQ5T7M9 428 aa12.11□□□□□ -0.47
XRCC3-207ENST00000554774 H1FNTQ75WM6 255 aaPredicted RBP12.11□□□□□ -0.47
XRCC3-207ENST00000554774 CCDC36Q8IYA8 594 aa12.11□□□□□ -0.47
XRCC3-207ENST00000554774 RFLNBQ8N5W9 214 aa12.11□□□□□ -0.47
XRCC3-207ENST00000554774 IL17RDQ8NFM7 739 aa12.11□□□□□ -0.47
XRCC3-207ENST00000554774 OR9I1Q8NGQ6 314 aa12.11□□□□□ -0.47
XRCC3-207ENST00000554774 HPS1Q92902 700 aa12.11□□□□□ -0.47
XRCC3-207ENST00000554774 SLC35B4Q969S0 331 aa12.11□□□□□ -0.47
XRCC3-207ENST00000554774 OR2M2Q96R28 347 aa12.11□□□□□ -0.47
XRCC3-207ENST00000554774 RAD21L1Q9H4I0 556 aa12.11□□□□□ -0.47
XRCC3-207ENST00000554774 C12orf10Q9HB07 376 aa12.11□□□□□ -0.47
XRCC3-207ENST00000554774 BCL2L10Q9HD36 194 aa12.11□□□□□ -0.47
XRCC3-207ENST00000554774 A4GALTQ9NPC4 353 aa12.11□□□□□ -0.47
XRCC3-207ENST00000554774 CMAHPQ9Y471 501 aa12.11□□□□□ -0.47
XRCC3-207ENST00000554774 TRAV36DV7A0A075B6V5 113 aa12.1□□□□□ -0.47
XRCC3-207ENST00000554774 A0A1B0GWA3 101 aa12.1□□□□□ -0.47
XRCC3-207ENST00000554774 ZNF99A8MXY4 864 aaPredicted RBP12.1□□□□□ -0.47
XRCC3-207ENST00000554774 CLIC1O00299 241 aa12.1□□□□□ -0.47
XRCC3-207ENST00000554774 UBDO15205 165 aa12.1□□□□□ -0.47
XRCC3-207ENST00000554774 TRAF3IP2O43734 574 aaPredicted RBP12.1□□□□□ -0.47
XRCC3-207ENST00000554774 FZD7O75084 574 aa12.1□□□□□ -0.47
XRCC3-207ENST00000554774 IGFBP1P08833 259 aaPredicted RBP12.1□□□□□ -0.47
XRCC3-207ENST00000554774 CD79AP11912 226 aa12.1□□□□□ -0.47
XRCC3-207ENST00000554774 HTR2AP28223 471 aa12.1□□□□□ -0.47
XRCC3-207ENST00000554774 CDH15P55291 814 aa12.1□□□□□ -0.47
XRCC3-207ENST00000554774 CCNIQ14094 377 aa12.1□□□□□ -0.47
XRCC3-207ENST00000554774 PHYHD1Q5SRE7 291 aa12.1□□□□□ -0.47
XRCC3-207ENST00000554774 SLC2A7Q6PXP3 512 aa12.1□□□□□ -0.47
XRCC3-207ENST00000554774 C5orf46Q6UWT4 87 aa12.1□□□□□ -0.47
XRCC3-207ENST00000554774 C6orf89Q6UWU4 347 aa12.1□□□□□ -0.47
XRCC3-207ENST00000554774 NET1Q7Z628 596 aaPredicted RBP12.1□□□□□ -0.47
XRCC3-207ENST00000554774 UEVLDQ8IX04 471 aa12.1□□□□□ -0.47
XRCC3-207ENST00000554774 TMEM123Q8N131 208 aa12.1□□□□□ -0.47
XRCC3-207ENST00000554774 MIER2Q8N344 545 aa12.1□□□□□ -0.47
XRCC3-207ENST00000554774 RNF217Q8TC41 542 aa12.1□□□□□ -0.47
XRCC3-207ENST00000554774 GTF2H4Q92759 462 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms