RNA–Protein interactions for RNA: ENST00000550008.6

CUX1-214, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,350 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-214ENST00000550008 FTMTQ8N4E7 242 aa13.76□□□□□ -0.21
CUX1-214ENST00000550008 ZNF417Q8TAU3 575 aa13.76□□□□□ -0.21
CUX1-214ENST00000550008 ARL6Q9H0F7 186 aa13.76□□□□□ -0.21
CUX1-214ENST00000550008 MBD2Q9UBB5 411 aa13.76□□□□□ -0.21
CUX1-214ENST00000550008 C5orf67F2Z3F1 127 aa13.76□□□□□ -0.21
CUX1-214ENST00000550008 SURF4O15260 269 aa13.76□□□□□ -0.21
CUX1-214ENST00000550008 SDHBP21912 280 aa13.76□□□□□ -0.21
CUX1-214ENST00000550008 FAM205BPQ63HN1 556 aa13.76□□□□□ -0.21
CUX1-214ENST00000550008 SLC35F3Q8IY50 421 aa13.76□□□□□ -0.21
CUX1-214ENST00000550008 GPR137CQ8N3F9 429 aa13.76□□□□□ -0.21
CUX1-214ENST00000550008 SPERTQ8NA61 448 aa13.76□□□□□ -0.21
CUX1-214ENST00000550008 AGBL5Q8NDL9 886 aa13.76□□□□□ -0.21
CUX1-214ENST00000550008 OR52N1Q8NH53 320 aa13.76□□□□□ -0.21
CUX1-214ENST00000550008 WDR81Q562E7 1941 aa13.76□□□□□ -0.21
CUX1-214ENST00000550008 A0A1W2PQF6 199 aa13.76□□□□□ -0.21
CUX1-214ENST00000550008 OR7A10O76100 309 aa13.76□□□□□ -0.21
CUX1-214ENST00000550008 TMEM225BP0DP42 221 aa13.76□□□□□ -0.21
CUX1-214ENST00000550008 FOLR3P41439 243 aa13.76□□□□□ -0.21
CUX1-214ENST00000550008 CCR5P51681 352 aa13.76□□□□□ -0.21
CUX1-214ENST00000550008 ELAVL1Q15717 326 aaKnown RBP13.76□□□□□ -0.21
CUX1-214ENST00000550008 SLC22A6Q4U2R8 563 aa13.76□□□□□ -0.21
CUX1-214ENST00000550008 CCDC58Q4VC31 144 aa13.76□□□□□ -0.21
CUX1-214ENST00000550008 DMRTC1Q5HYR2 192 aa13.76□□□□□ -0.21
CUX1-214ENST00000550008 HBMQ6B0K9 141 aa13.76□□□□□ -0.21
CUX1-214ENST00000550008 LYPD4Q6UWN0 246 aa13.76□□□□□ -0.21
CUX1-214ENST00000550008 DPY19L2P2Q6ZN68 376 aa13.76□□□□□ -0.21
CUX1-214ENST00000550008 GDPD3Q7L5L3 318 aa13.76□□□□□ -0.21
CUX1-214ENST00000550008 CCDC28AQ8IWP9 274 aa13.76□□□□□ -0.21
CUX1-214ENST00000550008 OR5D18Q8NGL1 313 aa13.76□□□□□ -0.21
CUX1-214ENST00000550008 COQ8AQ8NI60 647 aa13.76□□□□□ -0.21
CUX1-214ENST00000550008 ZNF587Q96SQ5 575 aaPredicted RBP13.76□□□□□ -0.21
CUX1-214ENST00000550008 OR51B6Q9H340 312 aa13.76□□□□□ -0.21
CUX1-214ENST00000550008 INPP5EQ9NRR6 644 aa13.76□□□□□ -0.21
CUX1-214ENST00000550008 SMLR1H3BR10 107 aa13.76□□□□□ -0.21
CUX1-214ENST00000550008 HBQ1P09105 142 aa13.76□□□□□ -0.21
CUX1-214ENST00000550008 BIDP55957 195 aa13.76□□□□□ -0.21
CUX1-214ENST00000550008 DCAF7P61962 342 aa13.76□□□□□ -0.21
CUX1-214ENST00000550008 PSPHP78330 225 aa13.76□□□□□ -0.21
CUX1-214ENST00000550008 ZNF425Q6IV72 752 aa13.76□□□□□ -0.21
CUX1-214ENST00000550008 VASH1Q7L8A9 365 aaPredicted RBP13.76□□□□□ -0.21
CUX1-214ENST00000550008 IQCF2Q8IXL9 164 aa13.76□□□□□ -0.21
CUX1-214ENST00000550008 LRRC18Q8N456 261 aa13.76□□□□□ -0.21
CUX1-214ENST00000550008 INO80EQ8NBZ0 244 aaPredicted RBP13.76□□□□□ -0.21
CUX1-214ENST00000550008 PCNPQ8WW12 178 aaKnown RBP13.76□□□□□ -0.21
CUX1-214ENST00000550008 THRSPQ92748 146 aa13.76□□□□□ -0.21
CUX1-214ENST00000550008 CREB3L1Q96BA8 519 aa13.76□□□□□ -0.21
CUX1-214ENST00000550008 HHLA2Q9UM44 414 aa13.76□□□□□ -0.21
CUX1-214ENST00000550008 EMC9Q9Y3B6 208 aa13.76□□□□□ -0.21
CUX1-214ENST00000550008 ANKRD33BA6NCL7 494 aa13.75□□□□□ -0.21
CUX1-214ENST00000550008 EEF1E1-BLOC1S5C9J1V9 151 aa13.75□□□□□ -0.21
CUX1-214ENST00000550008 CDC42EP2O14613 210 aa13.75□□□□□ -0.21
CUX1-214ENST00000550008 AKR7A3O95154 331 aa13.75□□□□□ -0.21
CUX1-214ENST00000550008 IFNA7P01567 189 aa13.75□□□□□ -0.21
CUX1-214ENST00000550008 LCATP04180 440 aa13.75□□□□□ -0.21
CUX1-214ENST00000550008 SYPP08247 313 aa13.75□□□□□ -0.21
CUX1-214ENST00000550008 PIPP12273 146 aaPredicted RBP13.75□□□□□ -0.21
CUX1-214ENST00000550008 HTR2BP41595 481 aa13.75□□□□□ -0.21
CUX1-214ENST00000550008 OXA1LQ15070 435 aa13.75□□□□□ -0.21
CUX1-214ENST00000550008 PRSS53Q2L4Q9 553 aa13.75□□□□□ -0.21
CUX1-214ENST00000550008 FCRL6Q6DN72 434 aa13.75□□□□□ -0.21
CUX1-214ENST00000550008 CD163Q86VB7 1156 aa13.75□□□□□ -0.21
CUX1-214ENST00000550008 SIRT6Q8N6T7 355 aa13.75□□□□□ -0.21
CUX1-214ENST00000550008 ACBD4Q8NC06 268 aa13.75□□□□□ -0.21
CUX1-214ENST00000550008 OR13C9Q8NGT0 318 aa13.75□□□□□ -0.21
CUX1-214ENST00000550008 SLC25A46Q96AG3 418 aa13.75□□□□□ -0.21
CUX1-214ENST00000550008 OR2B2Q9GZK3 357 aa13.75□□□□□ -0.21
CUX1-214ENST00000550008 SLIRPQ9GZT3 109 aaKnown RBP13.75□□□□□ -0.21
CUX1-214ENST00000550008 B3GAT2Q9NPZ5 323 aa13.75□□□□□ -0.21
CUX1-214ENST00000550008 MUTYHQ9UIF7 546 aa13.75□□□□□ -0.21
CUX1-214ENST00000550008 METTL12A8MUP2 240 aa13.75□□□□□ -0.21
CUX1-214ENST00000550008 DISC1C4P0D8 188 aa13.75□□□□□ -0.21
CUX1-214ENST00000550008 CCDC71Q8IV32 467 aaPredicted RBP13.75□□□□□ -0.21
CUX1-214ENST00000550008 ZNF615Q8N8J6 731 aa13.75□□□□□ -0.21
CUX1-214ENST00000550008 OR8D4Q8NGM9 314 aa13.75□□□□□ -0.21
CUX1-214ENST00000550008 GPR119Q8TDV5 335 aa13.75□□□□□ -0.21
CUX1-214ENST00000550008 HCAR1Q9BXC0 346 aa13.75□□□□□ -0.21
CUX1-214ENST00000550008 OR2S2Q9NQN1 319 aa13.75□□□□□ -0.21
CUX1-214ENST00000550008 NDUFB11Q9NX14 153 aa13.75□□□□□ -0.21
CUX1-214ENST00000550008 RABL2AQ9UBK7 228 aaPredicted RBP13.75□□□□□ -0.21
CUX1-214ENST00000550008 PHYHO14832 338 aa13.75□□□□□ -0.21
CUX1-214ENST00000550008 SSTR2P30874 369 aa13.75□□□□□ -0.21
CUX1-214ENST00000550008 DAP3P51398 398 aaKnown RBP13.75□□□□□ -0.21
CUX1-214ENST00000550008 CCR6P51684 374 aa13.75□□□□□ -0.21
CUX1-214ENST00000550008 PER3P56645 1201 aa13.75□□□□□ -0.21
CUX1-214ENST00000550008 GPR50Q13585 617 aa13.75□□□□□ -0.21
CUX1-214ENST00000550008 SWI5Q1ZZU3 235 aa13.75□□□□□ -0.21
CUX1-214ENST00000550008 CORO6Q6QEF8 472 aa13.75□□□□□ -0.21
CUX1-214ENST00000550008 PLPP7Q8NBV4 271 aa13.75□□□□□ -0.21
CUX1-214ENST00000550008 OR51D1Q8NGF3 324 aa13.75□□□□□ -0.21
CUX1-214ENST00000550008 OR4C15Q8NGM1 316 aa13.75□□□□□ -0.21
CUX1-214ENST00000550008 OR2I1PQ8NGU4 316 aa13.75□□□□□ -0.21
CUX1-214ENST00000550008 OR5J2Q8NH18 312 aa13.75□□□□□ -0.21
CUX1-214ENST00000550008 DEDD2Q8WXF8 326 aa13.75□□□□□ -0.21
CUX1-214ENST00000550008 SLC35B4Q969S0 331 aa13.75□□□□□ -0.21
CUX1-214ENST00000550008 ZNF471Q9BX82 626 aaPredicted RBP13.75□□□□□ -0.21
CUX1-214ENST00000550008 ZNF717Q9BY31 904 aaPredicted RBP13.75□□□□□ -0.21
CUX1-214ENST00000550008 GALNT9Q9HCQ5 603 aa13.75□□□□□ -0.21
CUX1-214ENST00000550008 CTSFQ9UBX1 484 aa13.75□□□□□ -0.21
CUX1-214ENST00000550008 ARSBP15848 533 aa13.74□□□□□ -0.21
CUX1-214ENST00000550008 FOXL2P58012 376 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms