RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 ERVK-25P63136 954 aa12.99□□□□□ -0.33
SRP54-202ENST00000546080 ID2Q02363 134 aa12.99□□□□□ -0.33
SRP54-202ENST00000546080 PLAURQ03405 335 aa12.99□□□□□ -0.33
SRP54-202ENST00000546080 MAMSTRQ6ZN01 415 aa12.99□□□□□ -0.33
SRP54-202ENST00000546080 FAM220AQ7Z4H9 259 aa12.99□□□□□ -0.33
SRP54-202ENST00000546080 ZNF546Q86UE3 836 aa12.99□□□□□ -0.33
SRP54-202ENST00000546080 ZNF227Q86WZ6 799 aa12.99□□□□□ -0.33
SRP54-202ENST00000546080 CDRT4Q8N9R6 151 aa12.99□□□□□ -0.33
SRP54-202ENST00000546080 OR51S1Q8NGJ8 323 aa12.99□□□□□ -0.33
SRP54-202ENST00000546080 RSPH9Q9H1X1 276 aaPredicted RBP12.99□□□□□ -0.33
SRP54-202ENST00000546080 PRRC2BQ5JSZ5 2229 aaKnown RBP12.99□□□□□ -0.33
SRP54-202ENST00000546080 TRAV14DV4A0A0A6YYC5 116 aa12.98□□□□□ -0.33
SRP54-202ENST00000546080 A0A0D9SG52 128 aa12.98□□□□□ -0.33
SRP54-202ENST00000546080 IMPA2O14732 288 aa12.98□□□□□ -0.33
SRP54-202ENST00000546080 CXCL14O95715 111 aa12.98□□□□□ -0.33
SRP54-202ENST00000546080 RHOP08100 348 aa12.98□□□□□ -0.33
SRP54-202ENST00000546080 EPCAMP16422 314 aa12.98□□□□□ -0.33
SRP54-202ENST00000546080 AGTR1P30556 359 aa12.98□□□□□ -0.33
SRP54-202ENST00000546080 TLX1P31314 330 aaPredicted RBP12.98□□□□□ -0.33
SRP54-202ENST00000546080 CBX5P45973 191 aa12.98□□□□□ -0.33
SRP54-202ENST00000546080 AKR1D1P51857 326 aa12.98□□□□□ -0.33
SRP54-202ENST00000546080 PLA2G7Q13093 441 aa12.98□□□□□ -0.33
SRP54-202ENST00000546080 OR5AK2Q8NH90 309 aa12.98□□□□□ -0.33
SRP54-202ENST00000546080 ZCCHC10Q8TBK6 192 aa12.98□□□□□ -0.33
SRP54-202ENST00000546080 STK35Q8TDR2 534 aa12.98□□□□□ -0.33
SRP54-202ENST00000546080 DUSP19Q8WTR2 217 aa12.98□□□□□ -0.33
SRP54-202ENST00000546080 ZNF426Q9BUY5 554 aa12.98□□□□□ -0.33
SRP54-202ENST00000546080 GPR174Q9BXC1 333 aa12.98□□□□□ -0.33
SRP54-202ENST00000546080 ACTR10Q9NZ32 417 aa12.98□□□□□ -0.33
SRP54-202ENST00000546080 MOKQ9UQ07 419 aa12.98□□□□□ -0.33
SRP54-202ENST00000546080 ENTPD2Q9Y5L3 495 aa12.98□□□□□ -0.33
SRP54-202ENST00000546080 A0A087WV48 116 aa12.98□□□□□ -0.33
SRP54-202ENST00000546080 ABHD14A-ACY1A0A1B0GW23 586 aa12.98□□□□□ -0.33
SRP54-202ENST00000546080 KANTRA0A1W2PQU2 76 aa12.98□□□□□ -0.33
SRP54-202ENST00000546080 LRRC72A6NJI9 287 aa12.98□□□□□ -0.33
SRP54-202ENST00000546080 GNB5O14775 395 aa12.98□□□□□ -0.33
SRP54-202ENST00000546080 FGF19O95750 216 aa12.98□□□□□ -0.33
SRP54-202ENST00000546080 INHAP05111 366 aa12.98□□□□□ -0.33
SRP54-202ENST00000546080 CD96P40200 585 aa12.98□□□□□ -0.33
SRP54-202ENST00000546080 RPL35P42766 123 aaKnown RBP12.98□□□□□ -0.33
SRP54-202ENST00000546080 EIF2B5Q13144 721 aaKnown RBP12.98□□□□□ -0.33
SRP54-202ENST00000546080 FHL5Q5TD97 284 aa12.98□□□□□ -0.33
SRP54-202ENST00000546080 SLC6A19Q695T7 634 aa12.98□□□□□ -0.33
SRP54-202ENST00000546080 ZNF425Q6IV72 752 aa12.98□□□□□ -0.33
SRP54-202ENST00000546080 CCDC36Q8IYA8 594 aa12.98□□□□□ -0.33
SRP54-202ENST00000546080 NPEPL1Q8NDH3 523 aa12.98□□□□□ -0.33
SRP54-202ENST00000546080 ZPLD1Q8TCW7 415 aa12.98□□□□□ -0.33
SRP54-202ENST00000546080 STACQ99469 402 aa12.98□□□□□ -0.33
SRP54-202ENST00000546080 BARX1Q9HBU1 254 aaPredicted RBP12.98□□□□□ -0.33
SRP54-202ENST00000546080 CXXC1Q9P0U4 656 aaPredicted RBP12.98□□□□□ -0.33
SRP54-202ENST00000546080 NDRG3Q9UGV2 375 aa12.98□□□□□ -0.33
SRP54-202ENST00000546080 MLXQ9UH92 298 aa12.98□□□□□ -0.33
SRP54-202ENST00000546080 CDV3Q9UKY7 258 aaKnown RBP12.98□□□□□ -0.33
SRP54-202ENST00000546080 MEIS3P1A6NDR6 274 aa12.97□□□□□ -0.33
SRP54-202ENST00000546080 GGT3PA6NGU5 568 aa12.97□□□□□ -0.33
SRP54-202ENST00000546080 C1QTNF3-AMACRE9PGA6 284 aa12.97□□□□□ -0.33
SRP54-202ENST00000546080 BRINP1O60477 761 aa12.97□□□□□ -0.33
SRP54-202ENST00000546080 EIF4E2O60573 245 aaKnown RBP12.97□□□□□ -0.33
SRP54-202ENST00000546080 FGF18O76093 207 aa12.97□□□□□ -0.33
SRP54-202ENST00000546080 AK1P00568 194 aa12.97□□□□□ -0.33
SRP54-202ENST00000546080 MAS1P04201 325 aa12.97□□□□□ -0.33
SRP54-202ENST00000546080 OR8G3PP0DMU2 310 aa12.97□□□□□ -0.33
SRP54-202ENST00000546080 CNR1P21554 472 aa12.97□□□□□ -0.33
SRP54-202ENST00000546080 PPM1AP35813 382 aa12.97□□□□□ -0.33
SRP54-202ENST00000546080 HOXA1P49639 335 aaPredicted RBP12.97□□□□□ -0.33
SRP54-202ENST00000546080 SNRPNP63162 240 aaKnown RBP12.97□□□□□ -0.33
SRP54-202ENST00000546080 SP3Q02447 781 aa12.97□□□□□ -0.33
SRP54-202ENST00000546080 CCDC157Q569K6 752 aa12.97□□□□□ -0.33
SRP54-202ENST00000546080 YOD1Q5VVQ6 348 aaPredicted RBP12.97□□□□□ -0.33
SRP54-202ENST00000546080 CNKSR3Q6P9H4 555 aa12.97□□□□□ -0.33
SRP54-202ENST00000546080 USP53Q70EK8 1073 aa12.97□□□□□ -0.33
SRP54-202ENST00000546080 MOB3CQ70IA8 216 aa12.97□□□□□ -0.33
SRP54-202ENST00000546080 VN1R4Q7Z5H5 301 aa12.97□□□□□ -0.33
SRP54-202ENST00000546080 LRRTM1Q86UE6 522 aa12.97□□□□□ -0.33
SRP54-202ENST00000546080 CAMKVQ8NCB2 501 aa12.97□□□□□ -0.33
SRP54-202ENST00000546080 LILRB1Q8NHL6 650 aaPredicted RBP12.97□□□□□ -0.33
SRP54-202ENST00000546080 TRIM2Q9C040 744 aa12.97□□□□□ -0.33
SRP54-202ENST00000546080 CHST6Q9GZX3 395 aa12.97□□□□□ -0.33
SRP54-202ENST00000546080 TMEM185BQ9H7F4 350 aa12.97□□□□□ -0.33
SRP54-202ENST00000546080 IFT22Q9H7X7 185 aa12.97□□□□□ -0.33
SRP54-202ENST00000546080 MBNL1Q9NR56 388 aaKnown RBP12.97□□□□□ -0.33
SRP54-202ENST00000546080 SLC27A6Q9Y2P4 619 aa12.97□□□□□ -0.33
SRP54-202ENST00000546080 OR6C68A6NDL8 312 aa12.97□□□□□ -0.33
SRP54-202ENST00000546080 FAM171A2A8MVW0 826 aa12.97□□□□□ -0.33
SRP54-202ENST00000546080 PRR32B1ATL7 298 aa12.97□□□□□ -0.33
SRP54-202ENST00000546080 ZNF254O75437 659 aa12.97□□□□□ -0.33
SRP54-202ENST00000546080 TACSTD2P09758 323 aa12.97□□□□□ -0.33
SRP54-202ENST00000546080 GABRA3P34903 492 aa12.97□□□□□ -0.33
SRP54-202ENST00000546080 LUMP51884 338 aaPredicted RBP12.97□□□□□ -0.33
SRP54-202ENST00000546080 GUCA2AQ02747 115 aa12.97□□□□□ -0.33
SRP54-202ENST00000546080 ALKBH1Q13686 389 aaKnown RBP12.97□□□□□ -0.33
SRP54-202ENST00000546080 FGL2Q14314 439 aa12.97□□□□□ -0.33
SRP54-202ENST00000546080 IRF4Q15306 451 aa12.97□□□□□ -0.33
SRP54-202ENST00000546080 DPY19L2P2Q6ZN68 376 aa12.97□□□□□ -0.33
SRP54-202ENST00000546080 BEST3Q8N1M1 668 aa12.97□□□□□ -0.33
SRP54-202ENST00000546080 TMEM185AQ8NFB2 350 aa12.97□□□□□ -0.33
SRP54-202ENST00000546080 OR8S1Q8NH09 359 aa12.97□□□□□ -0.33
SRP54-202ENST00000546080 CCDC107Q8WV48 283 aa12.97□□□□□ -0.33
SRP54-202ENST00000546080 RASD2Q96D21 266 aa12.97□□□□□ -0.33
SRP54-202ENST00000546080 Q96M85 177 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms