RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 CLDN34H7C241 214 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 PRMT5O14744 637 aaPredicted RBP4.54□□□□□ -1.68
NIPBL-204ENST00000504430 KMOO15229 486 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 ANXA9O76027 345 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 ASS1P00966 412 aaKnown RBP4.54□□□□□ -1.68
NIPBL-204ENST00000504430 OAS1P00973 400 aaKnown RBP4.54□□□□□ -1.68
NIPBL-204ENST00000504430 MELTFP08582 738 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 SLC35G4P0C7Q5 338 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 OR3A3P47888 321 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 OR3A2P47893 321 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 AQP5P55064 265 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 CDH11P55287 796 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 HOXA4Q00056 320 aaPredicted RBP4.54□□□□□ -1.68
NIPBL-204ENST00000504430 SEMG2Q02383 582 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 MLLT11Q13015 90 aaPredicted RBP4.54□□□□□ -1.68
NIPBL-204ENST00000504430 Q6ZSV7 163 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 APRG1Q8IVJ8 170 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 RCOR2Q8IZ40 523 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 PUSL1Q8N0Z8 303 aaKnown RBP4.54□□□□□ -1.68
NIPBL-204ENST00000504430 ATP6V0D2Q8N8Y2 350 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 ZNF738Q8NE65 137 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 OR6Q1Q8NGQ2 317 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 OSR1Q8TAX0 266 aaPredicted RBP4.54□□□□□ -1.68
NIPBL-204ENST00000504430 PYDC1Q8WXC3 89 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 ART4Q93070 314 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 ABTB1Q969K4 478 aaPredicted RBP4.54□□□□□ -1.68
NIPBL-204ENST00000504430 CXorf40BQ96DE9 158 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 CCDC126Q96EE4 140 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 ZNF641Q96N77 438 aaPredicted RBP4.54□□□□□ -1.68
NIPBL-204ENST00000504430 WFIKKN1Q96NZ8 548 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 SERPINB12Q96P63 405 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 GFM1Q96RP9 751 aaKnown RBP4.54□□□□□ -1.68
NIPBL-204ENST00000504430 MLST8Q9BVC4 326 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 SLC19A3Q9BZV2 496 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 CSTL1Q9H114 145 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 PAK1IP1Q9NWT1 392 aaPredicted RBP4.54□□□□□ -1.68
NIPBL-204ENST00000504430 NDUFAF1Q9Y375 327 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 OR2W1Q9Y3N9 320 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 MPPED1O15442 326 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 ITM2AO43736 263 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 EIF4E2O60573 245 aaKnown RBP4.54□□□□□ -1.68
NIPBL-204ENST00000504430 RAD1O60671 282 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 GUSBP08236 651 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 HOXD4P09016 255 aaPredicted RBP4.54□□□□□ -1.68
NIPBL-204ENST00000504430 GABRG2P18507 467 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 FOLR3P41439 243 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 GLIPR1P48060 266 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 RASSF2P50749 326 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 PDX1P52945 283 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 ZNF121P58317 390 aaPredicted RBP4.54□□□□□ -1.68
NIPBL-204ENST00000504430 ZP1P60852 638 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 ARF6P62330 175 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 PRKCDQ05655 676 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 RAB31Q13636 194 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 OR4D1Q15615 310 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 ZNF790Q6PG37 636 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 NET1Q7Z628 596 aaPredicted RBP4.54□□□□□ -1.68
NIPBL-204ENST00000504430 SMAP2Q8WU79 429 aaPredicted RBP4.54□□□□□ -1.68
NIPBL-204ENST00000504430 SMARCD2Q92925 531 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 SGTBQ96EQ0 304 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 OR5B12Q96R08 314 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 RNF2Q99496 336 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 CPVLQ9H3G5 476 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 ZNF703Q9H7S9 590 aaPredicted RBP4.54□□□□□ -1.68
NIPBL-204ENST00000504430 APOBEC3GQ9HC16 384 aaKnown RBP4.54□□□□□ -1.68
NIPBL-204ENST00000504430 NRN1Q9NPD7 142 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 SLC38A7Q9NVC3 462 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 PPP4R1LQ9P1A2 415 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 SLC22A13Q9Y226 551 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 TNRQ92752 1358 aa4.54□□□□□ -1.68
NIPBL-204ENST00000504430 ROCK2O75116 1388 aaKnown RBP4.54□□□□□ -1.68
NIPBL-204ENST00000504430 LINC00587B1AMM8 73 aa4.53□□□□□ -1.68
NIPBL-204ENST00000504430 FGF16O43320 207 aa4.53□□□□□ -1.68
NIPBL-204ENST00000504430 XPNPEP2O43895 674 aa4.53□□□□□ -1.68
NIPBL-204ENST00000504430 CTNSO60931 367 aa4.53□□□□□ -1.68
NIPBL-204ENST00000504430 HSPD1P10809 573 aaKnown RBP4.53□□□□□ -1.68
NIPBL-204ENST00000504430 LIPCP11150 499 aa4.53□□□□□ -1.68
NIPBL-204ENST00000504430 UGT2B7P16662 529 aa4.53□□□□□ -1.68
NIPBL-204ENST00000504430 COMTP21964 271 aa4.53□□□□□ -1.68
NIPBL-204ENST00000504430 AADACP22760 399 aa4.53□□□□□ -1.68
NIPBL-204ENST00000504430 RPS12P25398 132 aaKnown RBP4.53□□□□□ -1.68
NIPBL-204ENST00000504430 PRDX3P30048 256 aaKnown RBP4.53□□□□□ -1.68
NIPBL-204ENST00000504430 GRB7Q14451 532 aa4.53□□□□□ -1.68
NIPBL-204ENST00000504430 SPCS2Q15005 226 aa4.53□□□□□ -1.68
NIPBL-204ENST00000504430 TAL2Q16559 108 aa4.53□□□□□ -1.68
NIPBL-204ENST00000504430 MLANAQ16655 118 aa4.53□□□□□ -1.68
NIPBL-204ENST00000504430 C1orf146Q5VVC0 180 aa4.53□□□□□ -1.68
NIPBL-204ENST00000504430 ADAM5Q6NVV9 412 aa4.53□□□□□ -1.68
NIPBL-204ENST00000504430 CALHM1Q8IU99 346 aa4.53□□□□□ -1.68
NIPBL-204ENST00000504430 APOBEC3FQ8IUX4 373 aaKnown RBP4.53□□□□□ -1.68
NIPBL-204ENST00000504430 CPSF7Q8N684 471 aaKnown RBP4.53□□□□□ -1.68
NIPBL-204ENST00000504430 OR2T12Q8NG77 320 aa4.53□□□□□ -1.68
NIPBL-204ENST00000504430 ITFG1Q8TB96 612 aa4.53□□□□□ -1.68
NIPBL-204ENST00000504430 TMEM163Q8TC26 289 aa4.53□□□□□ -1.68
NIPBL-204ENST00000504430 RNF138Q8WVD3 245 aa4.53□□□□□ -1.68
NIPBL-204ENST00000504430 C22orf15Q8WYQ4 148 aa4.53□□□□□ -1.68
NIPBL-204ENST00000504430 GPR22Q99680 433 aa4.53□□□□□ -1.68
NIPBL-204ENST00000504430 DUSP26Q9BV47 211 aa4.53□□□□□ -1.68
NIPBL-204ENST00000504430 PCBD2Q9H0N5 130 aa4.53□□□□□ -1.68
NIPBL-204ENST00000504430 FAM49AQ9H0Q0 323 aaPredicted RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms