RNA–Protein interactions for RNA: ENST00000497849.1

VIM-208, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 634 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-208ENST00000497849 P2RY4P51582 365 aa14.12□□□□□ -0.15
VIM-208ENST00000497849 ZNF311Q5JNZ3 666 aa14.12□□□□□ -0.15
VIM-208ENST00000497849 TYW3Q6IPR3 259 aaKnown RBP14.12□□□□□ -0.15
VIM-208ENST00000497849 ACSM5Q6NUN0 579 aa14.12□□□□□ -0.15
VIM-208ENST00000497849 CPLX4Q7Z7G2 160 aa14.12□□□□□ -0.15
VIM-208ENST00000497849 HMGN2P46Q86SG4 172 aa14.12□□□□□ -0.15
VIM-208ENST00000497849 GPAT4Q86UL3 456 aa14.12□□□□□ -0.15
VIM-208ENST00000497849 OR4M2Q8NGB6 313 aa14.12□□□□□ -0.15
VIM-208ENST00000497849 PMM1Q92871 262 aa14.12□□□□□ -0.15
VIM-208ENST00000497849 DVL3Q92997 716 aaPredicted RBP14.12□□□□□ -0.15
VIM-208ENST00000497849 MOAP1Q96BY2 351 aa14.12□□□□□ -0.15
VIM-208ENST00000497849 LRRC58Q96CX6 371 aa14.12□□□□□ -0.15
VIM-208ENST00000497849 ZG16BQ96DA0 208 aa14.12□□□□□ -0.15
VIM-208ENST00000497849 OR52B2Q96RD2 323 aa14.12□□□□□ -0.15
VIM-208ENST00000497849 FAM107BQ9H098 131 aa14.12□□□□□ -0.15
VIM-208ENST00000497849 ZNF665Q9H7R5 613 aa14.12□□□□□ -0.15
VIM-208ENST00000497849 MEAF6Q9HAF1 191 aa14.12□□□□□ -0.15
VIM-208ENST00000497849 EXOSC3Q9NQT5 275 aaKnown RBP14.12□□□□□ -0.15
VIM-208ENST00000497849 FGFR1OP2Q9NVK5 253 aa14.12□□□□□ -0.15
VIM-208ENST00000497849 MED29Q9NX70 200 aa14.12□□□□□ -0.15
VIM-208ENST00000497849 TMED5Q9Y3A6 229 aa14.12□□□□□ -0.15
VIM-208ENST00000497849 CORINQ9Y5Q5 1042 aa14.12□□□□□ -0.15
VIM-208ENST00000497849 LIPT2A6NK58 231 aa14.11□□□□□ -0.15
VIM-208ENST00000497849 AQP7P3A6NL99 342 aa14.11□□□□□ -0.15
VIM-208ENST00000497849 DEAF1O75398 565 aaPredicted RBP14.11□□□□□ -0.15
VIM-208ENST00000497849 FAM107AO95990 144 aa14.11□□□□□ -0.15
VIM-208ENST00000497849 GSNP06396 782 aa14.11□□□□□ -0.15
VIM-208ENST00000497849 ANPEPP15144 967 aa14.11□□□□□ -0.15
VIM-208ENST00000497849 NR4A1P22736 598 aa14.11□□□□□ -0.15
VIM-208ENST00000497849 PRTN3P24158 256 aa14.11□□□□□ -0.15
VIM-208ENST00000497849 TACR3P29371 465 aa14.11□□□□□ -0.15
VIM-208ENST00000497849 ALDH3B1P43353 468 aa14.11□□□□□ -0.15
VIM-208ENST00000497849 HTR3AP46098 478 aa14.11□□□□□ -0.15
VIM-208ENST00000497849 POLR2HP52434 150 aaKnown RBP14.11□□□□□ -0.15
VIM-208ENST00000497849 ZP4Q12836 540 aa14.11□□□□□ -0.15
VIM-208ENST00000497849 NPRL3Q12980 569 aa14.11□□□□□ -0.15
VIM-208ENST00000497849 CEACAM7Q14002 265 aa14.11□□□□□ -0.15
VIM-208ENST00000497849 IL23RQ5VWK5 629 aa14.11□□□□□ -0.15
VIM-208ENST00000497849 NXNQ6DKJ4 435 aa14.11□□□□□ -0.15
VIM-208ENST00000497849 CGB2Q6NT52 195 aa14.11□□□□□ -0.15
VIM-208ENST00000497849 CREB3L2Q70SY1 520 aa14.11□□□□□ -0.15
VIM-208ENST00000497849 CLEC4FQ8N1N0 589 aa14.11□□□□□ -0.15
VIM-208ENST00000497849 PPP3R2Q96LZ3 170 aa14.11□□□□□ -0.15
VIM-208ENST00000497849 C1orf147Q96MC9 270 aaPredicted RBP14.11□□□□□ -0.15
VIM-208ENST00000497849 DUX5Q96PT3 197 aa14.11□□□□□ -0.15
VIM-208ENST00000497849 CCT8L2Q96SF2 557 aa14.11□□□□□ -0.15
VIM-208ENST00000497849 EBF4Q9BQW3 602 aa14.11□□□□□ -0.15
VIM-208ENST00000497849 RABEP2Q9H5N1 569 aa14.11□□□□□ -0.15
VIM-208ENST00000497849 CRLF2Q9HC73 371 aa14.11□□□□□ -0.15
VIM-208ENST00000497849 NPHS2Q9NP85 383 aa14.11□□□□□ -0.15
VIM-208ENST00000497849 OPN4Q9UHM6 478 aa14.11□□□□□ -0.15
VIM-208ENST00000497849 DUXAA6NLW8 204 aa14.1□□□□□ -0.15
VIM-208ENST00000497849 POM121CA8CG34 1229 aa14.1□□□□□ -0.15
VIM-208ENST00000497849 J3QLI3 93 aa14.1□□□□□ -0.15
VIM-208ENST00000497849 ARR3P36575 388 aa14.1□□□□□ -0.15
VIM-208ENST00000497849 IDH3AP50213 366 aa14.1□□□□□ -0.15
VIM-208ENST00000497849 AQP5P55064 265 aa14.1□□□□□ -0.15
VIM-208ENST00000497849 HBA1P69905 142 aa14.1□□□□□ -0.15
VIM-208ENST00000497849 KCNJ10P78508 379 aa14.1□□□□□ -0.15
VIM-208ENST00000497849 MRPS11P82912 194 aaKnown RBP14.1□□□□□ -0.15
VIM-208ENST00000497849 ARF1P84077 181 aaKnown RBP14.1□□□□□ -0.15
VIM-208ENST00000497849 ROR2Q01974 943 aaKnown RBP14.1□□□□□ -0.15
VIM-208ENST00000497849 PTGR1Q14914 329 aa14.1□□□□□ -0.15
VIM-208ENST00000497849 MAD2L1BPQ15013 274 aaPredicted RBP14.1□□□□□ -0.15
VIM-208ENST00000497849 OR7A5Q15622 319 aa14.1□□□□□ -0.15
VIM-208ENST00000497849 LSM12Q3MHD2 195 aaKnown RBP14.1□□□□□ -0.15
VIM-208ENST00000497849 NIPAL3Q6P499 406 aa14.1□□□□□ -0.15
VIM-208ENST00000497849 EPGNQ6UW88 154 aa14.1□□□□□ -0.15
VIM-208ENST00000497849 C6orf120Q7Z4R8 191 aa14.1□□□□□ -0.15
VIM-208ENST00000497849 MDP1Q86V88 176 aa14.1□□□□□ -0.15
VIM-208ENST00000497849 LRP11Q86VZ4 500 aa14.1□□□□□ -0.15
VIM-208ENST00000497849 EPHX4Q8IUS5 362 aa14.1□□□□□ -0.15
VIM-208ENST00000497849 SIGLECL1Q8N7X8 197 aa14.1□□□□□ -0.15
VIM-208ENST00000497849 FNDC5Q8NAU1 212 aa14.1□□□□□ -0.15
VIM-208ENST00000497849 OIT3Q8WWZ8 545 aa14.1□□□□□ -0.15
VIM-208ENST00000497849 TAF15Q92804 592 aaKnown RBP eCLIP14.1□□□□□ -0.15
VIM-208ENST00000497849 COQ8BQ96D53 544 aa14.1□□□□□ -0.15
VIM-208ENST00000497849 SYT3Q9BQG1 590 aa14.1□□□□□ -0.15
VIM-208ENST00000497849 LINC00470Q9BZP3 86 aa14.1□□□□□ -0.15
VIM-208ENST00000497849 SLITRK2Q9H156 845 aa14.1□□□□□ -0.15
VIM-208ENST00000497849 MYEF2Q9P2K5 600 aaKnown RBP14.1□□□□□ -0.15
VIM-208ENST00000497849 TRPC5OSA6NMA1 111 aa14.09□□□□□ -0.15
VIM-208ENST00000497849 NDUFAB1O14561 156 aa14.09□□□□□ -0.15
VIM-208ENST00000497849 GPIP06744 558 aa14.09□□□□□ -0.15
VIM-208ENST00000497849 LBPP18428 481 aa14.09□□□□□ -0.15
VIM-208ENST00000497849 FPR2P25090 351 aa14.09□□□□□ -0.15
VIM-208ENST00000497849 RPL3P39023 403 aaKnown RBP14.09□□□□□ -0.15
VIM-208ENST00000497849 SH3BGRP55822 239 aaPredicted RBP14.09□□□□□ -0.15
VIM-208ENST00000497849 EMX2Q04743 252 aa14.09□□□□□ -0.15
VIM-208ENST00000497849 FUT5Q11128 374 aa14.09□□□□□ -0.15
VIM-208ENST00000497849 DCAF12L2Q5VW00 463 aa14.09□□□□□ -0.15
VIM-208ENST00000497849 TMEM225Q6GV28 225 aa14.09□□□□□ -0.15
VIM-208ENST00000497849 FRRS1Q6ZNA5 592 aa14.09□□□□□ -0.15
VIM-208ENST00000497849 C16orf62Q7Z3J2 963 aa14.09□□□□□ -0.15
VIM-208ENST00000497849 KIRREL3Q8IZU9 778 aa14.09□□□□□ -0.15
VIM-208ENST00000497849 IL17RDQ8NFM7 739 aa14.09□□□□□ -0.15
VIM-208ENST00000497849 BCAS4Q8TDM0 211 aa14.09□□□□□ -0.15
VIM-208ENST00000497849 CNOT9Q92600 299 aaKnown RBP14.09□□□□□ -0.15
VIM-208ENST00000497849 ZNF416Q9BWM5 594 aa14.09□□□□□ -0.15
VIM-208ENST00000497849 WDR45Q9Y484 360 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms