RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 RASSF1Q9NS23 344 aa8.55□□□□□ -1.04
HDAC3-208ENST00000476739 MRPL39Q9NYK5 338 aaKnown RBP8.55□□□□□ -1.04
HDAC3-208ENST00000476739 TAS2R5Q9NYW4 299 aa8.55□□□□□ -1.04
HDAC3-208ENST00000476739 NDUFAF4Q9P032 175 aa8.55□□□□□ -1.04
HDAC3-208ENST00000476739 MALT1Q9UDY8 824 aa8.55□□□□□ -1.04
HDAC3-208ENST00000476739 MAGEL2Q9UJ55 1249 aa8.55□□□□□ -1.04
HDAC3-208ENST00000476739 SAMD4AQ9UPU9 718 aaKnown RBP8.55□□□□□ -1.04
HDAC3-208ENST00000476739 GPR52Q9Y2T5 361 aa8.55□□□□□ -1.04
HDAC3-208ENST00000476739 CORINQ9Y5Q5 1042 aa8.55□□□□□ -1.04
HDAC3-208ENST00000476739 CSMD1Q96PZ7 3565 aa8.55□□□□□ -1.04
HDAC3-208ENST00000476739 ANKHD1Q8IWZ3 2542 aaKnown RBP8.54□□□□□ -1.04
HDAC3-208ENST00000476739 TCRBV5S2A0A599 114 aa8.54□□□□□ -1.04
HDAC3-208ENST00000476739 DEFB108AA8MXU0 73 aa8.54□□□□□ -1.04
HDAC3-208ENST00000476739 C11orf98E9PRG8 122 aa8.54□□□□□ -1.04
HDAC3-208ENST00000476739 RAD51DO75771 328 aa8.54□□□□□ -1.04
HDAC3-208ENST00000476739 SERPINI2O75830 405 aa8.54□□□□□ -1.04
HDAC3-208ENST00000476739 ZNF432O94892 652 aa8.54□□□□□ -1.04
HDAC3-208ENST00000476739 CNOT4O95628 575 aaKnown RBP8.54□□□□□ -1.04
HDAC3-208ENST00000476739 MT-ATP6P00846 226 aa8.54□□□□□ -1.04
HDAC3-208ENST00000476739 HRGP04196 525 aa8.54□□□□□ -1.04
HDAC3-208ENST00000476739 ASAH2BP0C7U1 165 aa8.54□□□□□ -1.04
HDAC3-208ENST00000476739 THRBP10828 461 aa8.54□□□□□ -1.04
HDAC3-208ENST00000476739 ZNF43P17038 809 aa8.54□□□□□ -1.04
HDAC3-208ENST00000476739 CRYGSP22914 178 aa8.54□□□□□ -1.04
HDAC3-208ENST00000476739 LOXP28300 417 aaPredicted RBP8.54□□□□□ -1.04
HDAC3-208ENST00000476739 DNAJA1P31689 397 aaKnown RBP8.54□□□□□ -1.04
HDAC3-208ENST00000476739 RBM34P42696 430 aaKnown RBP8.54□□□□□ -1.04
HDAC3-208ENST00000476739 IL1RL1Q01638 556 aa8.54□□□□□ -1.04
HDAC3-208ENST00000476739 POU3F1Q03052 451 aaPredicted RBP8.54□□□□□ -1.04
HDAC3-208ENST00000476739 PUDPQ08623 228 aa8.54□□□□□ -1.04
HDAC3-208ENST00000476739 ST3GAL3Q11203 375 aa8.54□□□□□ -1.04
HDAC3-208ENST00000476739 BLMHQ13867 455 aa8.54□□□□□ -1.04
HDAC3-208ENST00000476739 P2RY6Q15077 328 aa8.54□□□□□ -1.04
HDAC3-208ENST00000476739 SPATS1Q496A3 300 aa8.54□□□□□ -1.04
HDAC3-208ENST00000476739 PHYHD1Q5SRE7 291 aa8.54□□□□□ -1.04
HDAC3-208ENST00000476739 ALKBH2Q6NS38 261 aa8.54□□□□□ -1.04
HDAC3-208ENST00000476739 SEZ6L2Q6UXD5 910 aa8.54□□□□□ -1.04
HDAC3-208ENST00000476739 BHLHA15Q7RTS1 189 aaPredicted RBP8.54□□□□□ -1.04
HDAC3-208ENST00000476739 OFCC1Q8IZS5 231 aa8.54□□□□□ -1.04
HDAC3-208ENST00000476739 SCAIQ8N9R8 606 aa8.54□□□□□ -1.04
HDAC3-208ENST00000476739 ADPRHL1Q8NDY3 354 aa8.54□□□□□ -1.04
HDAC3-208ENST00000476739 OR5J2Q8NH18 312 aa8.54□□□□□ -1.04
HDAC3-208ENST00000476739 KISS1RQ969F8 398 aaPredicted RBP8.54□□□□□ -1.04
HDAC3-208ENST00000476739 PYURFQ96I23 114 aa8.54□□□□□ -1.04
HDAC3-208ENST00000476739 NSMCE2Q96MF7 247 aa8.54□□□□□ -1.04
HDAC3-208ENST00000476739 THTPAQ9BU02 230 aa8.54□□□□□ -1.04
HDAC3-208ENST00000476739 EMC6Q9BV81 110 aa8.54□□□□□ -1.04
HDAC3-208ENST00000476739 FNDC11Q9BVV2 318 aa8.54□□□□□ -1.04
HDAC3-208ENST00000476739 SLC19A3Q9BZV2 496 aa8.54□□□□□ -1.04
HDAC3-208ENST00000476739 C1orf21Q9H246 121 aa8.54□□□□□ -1.04
HDAC3-208ENST00000476739 VCXQ9H320 206 aa8.54□□□□□ -1.04
HDAC3-208ENST00000476739 LIME1Q9H400 295 aa8.54□□□□□ -1.04
HDAC3-208ENST00000476739 FKRPQ9H9S5 495 aa8.54□□□□□ -1.04
HDAC3-208ENST00000476739 NANSQ9NR45 359 aa8.54□□□□□ -1.04
HDAC3-208ENST00000476739 MED29Q9NX70 200 aa8.54□□□□□ -1.04
HDAC3-208ENST00000476739 NDRG3Q9UGV2 375 aa8.54□□□□□ -1.04
HDAC3-208ENST00000476739 ENPP4Q9Y6X5 453 aa8.54□□□□□ -1.04
HDAC3-208ENST00000476739 CSMD2Q7Z408 3487 aa8.53□□□□□ -1.04
HDAC3-208ENST00000476739 A0A087WUU8 490 aa8.53□□□□□ -1.04
HDAC3-208ENST00000476739 LOC102725191A0A1B0GVB3 256 aa8.53□□□□□ -1.04
HDAC3-208ENST00000476739 A0A1W2PR80 420 aa8.53□□□□□ -1.04
HDAC3-208ENST00000476739 A6NHS1 94 aa8.53□□□□□ -1.04
HDAC3-208ENST00000476739 KLF4O43474 513 aa8.53□□□□□ -1.04
HDAC3-208ENST00000476739 GMNNO75496 209 aa8.53□□□□□ -1.04
HDAC3-208ENST00000476739 OR7A10O76100 309 aa8.53□□□□□ -1.04
HDAC3-208ENST00000476739 ATP6V1G2O95670 118 aa8.53□□□□□ -1.04
HDAC3-208ENST00000476739 ADORA3P0DMS8 318 aa8.53□□□□□ -1.04
HDAC3-208ENST00000476739 UMPSP11172 480 aa8.53□□□□□ -1.04
HDAC3-208ENST00000476739 IFI30P13284 250 aa8.53□□□□□ -1.04
HDAC3-208ENST00000476739 MAKP20794 623 aa8.53□□□□□ -1.04
HDAC3-208ENST00000476739 AHCYP23526 432 aa8.53□□□□□ -1.04
HDAC3-208ENST00000476739 IL32P24001 234 aa8.53□□□□□ -1.04
HDAC3-208ENST00000476739 RPL18Q07020 188 aaKnown RBP8.53□□□□□ -1.04
HDAC3-208ENST00000476739 C1DQ13901 141 aaKnown RBP8.53□□□□□ -1.04
HDAC3-208ENST00000476739 TRIM25Q14258 630 aaKnown RBP8.53□□□□□ -1.04
HDAC3-208ENST00000476739 MFSD13AQ14CX5 517 aa8.53□□□□□ -1.04
HDAC3-208ENST00000476739 TRAM2Q15035 370 aa8.53□□□□□ -1.04
HDAC3-208ENST00000476739 TAB1Q15750 504 aa8.53□□□□□ -1.04
HDAC3-208ENST00000476739 CARD17Q5XLA6 110 aa8.53□□□□□ -1.04
HDAC3-208ENST00000476739 CDC20BQ86Y33 519 aa8.53□□□□□ -1.04
HDAC3-208ENST00000476739 WFDC8Q8IUA0 241 aa8.53□□□□□ -1.04
HDAC3-208ENST00000476739 UEVLDQ8IX04 471 aa8.53□□□□□ -1.04
HDAC3-208ENST00000476739 NRMQ8IXM6 262 aa8.53□□□□□ -1.04
HDAC3-208ENST00000476739 TMEM123Q8N131 208 aa8.53□□□□□ -1.04
HDAC3-208ENST00000476739 PIK3C3Q8NEB9 887 aa8.53□□□□□ -1.04
HDAC3-208ENST00000476739 CCDC124Q96CT7 223 aaKnown RBP8.53□□□□□ -1.04
HDAC3-208ENST00000476739 ZNF837Q96EG3 531 aaPredicted RBP8.53□□□□□ -1.04
HDAC3-208ENST00000476739 SGTBQ96EQ0 304 aa8.53□□□□□ -1.04
HDAC3-208ENST00000476739 HS6ST2Q96MM7 605 aa8.53□□□□□ -1.04
HDAC3-208ENST00000476739 ALKBH3Q96Q83 286 aaPredicted RBP8.53□□□□□ -1.04
HDAC3-208ENST00000476739 HS3ST6Q96QI5 342 aa8.53□□□□□ -1.04
HDAC3-208ENST00000476739 OR2M2Q96R28 347 aa8.53□□□□□ -1.04
HDAC3-208ENST00000476739 HDHD5Q9BXW7 423 aa8.53□□□□□ -1.04
HDAC3-208ENST00000476739 POLDIP3Q9BY77 421 aaKnown RBP8.53□□□□□ -1.04
HDAC3-208ENST00000476739 CLEC4MQ9H2X3 399 aaPredicted RBP8.53□□□□□ -1.04
HDAC3-208ENST00000476739 SLCO5A1Q9H2Y9 848 aa8.53□□□□□ -1.04
HDAC3-208ENST00000476739 NMNAT1Q9HAN9 279 aaPredicted RBP8.53□□□□□ -1.04
HDAC3-208ENST00000476739 FANCFQ9NPI8 374 aa8.53□□□□□ -1.04
HDAC3-208ENST00000476739 PARPBPQ9NWS1 579 aa8.53□□□□□ -1.04
HDAC3-208ENST00000476739 ASB6Q9NWX5 421 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms