RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 CLDN17P56750 224 aa22.1■■□□□ 1.13
VEGFA-208ENST00000417285 PCBP3P57721 371 aaKnown RBP22.1■■□□□ 1.13
VEGFA-208ENST00000417285 SLC30A8Q8IWU4 369 aa22.1■■□□□ 1.13
VEGFA-208ENST00000417285 KDM8Q8N371 416 aa22.1■■□□□ 1.13
VEGFA-208ENST00000417285 SLC38A2Q96QD8 506 aa22.1■■□□□ 1.13
VEGFA-208ENST00000417285 KATNB1Q9BVA0 655 aa22.1■■□□□ 1.13
VEGFA-208ENST00000417285 PRR14Q9BWN1 585 aa22.1■■□□□ 1.13
VEGFA-208ENST00000417285 TMEM120AQ9BXJ8 343 aa22.1■■□□□ 1.13
VEGFA-208ENST00000417285 MRGBPQ9NV56 204 aa22.1■■□□□ 1.13
VEGFA-208ENST00000417285 CRYAAP02489 173 aa22.09■■□□□ 1.13
VEGFA-208ENST00000417285 TROVE2P10155 538 aaKnown RBP eCLIP22.09■■□□□ 1.133e-17■■■□□ 18.6
VEGFA-208ENST00000417285 EFNA4P52798 201 aa22.09■■□□□ 1.13
VEGFA-208ENST00000417285 ROR2Q01974 943 aaKnown RBP22.09■■□□□ 1.13
VEGFA-208ENST00000417285 LGALS3BPQ08380 585 aa22.09■■□□□ 1.13
VEGFA-208ENST00000417285 SELPLGQ14242 412 aa22.09■■□□□ 1.13
VEGFA-208ENST00000417285 OR1Q1Q15612 314 aa22.09■■□□□ 1.13
VEGFA-208ENST00000417285 SMYD1Q8NB12 490 aa22.09■■□□□ 1.13
VEGFA-208ENST00000417285 ALKBH3Q96Q83 286 aaPredicted RBP22.09■■□□□ 1.13
VEGFA-208ENST00000417285 EPYCQ99645 322 aa22.09■■□□□ 1.13
VEGFA-208ENST00000417285 IGKV1D-42A0A075B6H8 117 aa22.08■■□□□ 1.13
VEGFA-208ENST00000417285 IGHV4-30-2A0A087WSY4 118 aa22.08■■□□□ 1.13
VEGFA-208ENST00000417285 A0A087WUJ7 227 aa22.08■■□□□ 1.13
VEGFA-208ENST00000417285 A0A0B4J2E0 115 aa22.08■■□□□ 1.13
VEGFA-208ENST00000417285 IGHV1-18A0A0C4DH31 117 aa22.08■■□□□ 1.13
VEGFA-208ENST00000417285 A0A1B0GX12 115 aa22.08■■□□□ 1.13
VEGFA-208ENST00000417285 M0R082 166 aa22.08■■□□□ 1.13
VEGFA-208ENST00000417285 AKAP8O43823 692 aaKnown RBP22.08■■□□□ 1.13
VEGFA-208ENST00000417285 SLC25A16P16260 332 aa22.08■■□□□ 1.13
VEGFA-208ENST00000417285 GRPRP30550 384 aa22.08■■□□□ 1.13
VEGFA-208ENST00000417285 LINGO2Q7L985 606 aa22.08■■□□□ 1.13
VEGFA-208ENST00000417285 CCDC36Q8IYA8 594 aa22.08■■□□□ 1.13
VEGFA-208ENST00000417285 GPR137CQ8N3F9 429 aa22.08■■□□□ 1.13
VEGFA-208ENST00000417285 ADPRHL1Q8NDY3 354 aa22.08■■□□□ 1.13
VEGFA-208ENST00000417285 ZNF417Q8TAU3 575 aa22.08■■□□□ 1.13
VEGFA-208ENST00000417285 ZNF587Q96SQ5 575 aaPredicted RBP22.08■■□□□ 1.13
VEGFA-208ENST00000417285 KAT8Q9H7Z6 458 aaKnown RBP22.08■■□□□ 1.13
VEGFA-208ENST00000417285 KLHL14Q9P2G3 628 aa22.08■■□□□ 1.13
VEGFA-208ENST00000417285 B3GAT1Q9P2W7 334 aa22.08■■□□□ 1.13
VEGFA-208ENST00000417285 CRNNQ9UBG3 495 aaPredicted RBP22.08■■□□□ 1.13
VEGFA-208ENST00000417285 CORINQ9Y5Q5 1042 aa22.08■■□□□ 1.13
VEGFA-208ENST00000417285 KIAA1324LA8MWY0 1029 aaPredicted RBP22.07■■□□□ 1.12
VEGFA-208ENST00000417285 F12P00748 615 aaPredicted RBP22.07■■□□□ 1.12
VEGFA-208ENST00000417285 C8BP07358 591 aa22.07■■□□□ 1.12
VEGFA-208ENST00000417285 CSF3P09919 207 aa22.07■■□□□ 1.12
VEGFA-208ENST00000417285 IL1RL1Q01638 556 aa22.07■■□□□ 1.12
VEGFA-208ENST00000417285 SWI5Q1ZZU3 235 aa22.07■■□□□ 1.12
VEGFA-208ENST00000417285 SWT1Q5T5J6 900 aaKnown RBP22.07■■□□□ 1.12
VEGFA-208ENST00000417285 PIK3C3Q8NEB9 887 aa22.07■■□□□ 1.12
VEGFA-208ENST00000417285 FAM168AQ92567 244 aa22.07■■□□□ 1.12
VEGFA-208ENST00000417285 YAE1D1Q9NRH1 226 aa22.07■■□□□ 1.12
VEGFA-208ENST00000417285 SEC14L4Q9UDX3 406 aa22.07■■□□□ 1.12
VEGFA-208ENST00000417285 MXRA5Q9NR99 2828 aa22.07■■□□□ 1.12
VEGFA-208ENST00000417285 M0QX08 132 aa22.06■■□□□ 1.12
VEGFA-208ENST00000417285 FMO6PO60774 539 aa22.06■■□□□ 1.12
VEGFA-208ENST00000417285 SERPINF1P36955 418 aa22.06■■□□□ 1.12
VEGFA-208ENST00000417285 ARF1P84077 181 aaKnown RBP22.06■■□□□ 1.12
VEGFA-208ENST00000417285 LOXL1Q08397 574 aaPredicted RBP22.06■■□□□ 1.12
VEGFA-208ENST00000417285 MST1LQ2TV78 715 aa22.06■■□□□ 1.12
VEGFA-208ENST00000417285 INTS11Q5TA45 600 aaKnown RBP22.06■■□□□ 1.12
VEGFA-208ENST00000417285 PATL1Q86TB9 770 aaKnown RBP22.06■■□□□ 1.12
VEGFA-208ENST00000417285 OR4F15Q8NGB8 312 aa22.06■■□□□ 1.12
VEGFA-208ENST00000417285 PROX1Q92786 737 aa22.06■■□□□ 1.12
VEGFA-208ENST00000417285 TNFRSF13CQ96RJ3 184 aa22.06■■□□□ 1.12
VEGFA-208ENST00000417285 MCHR1Q99705 422 aa22.06■■□□□ 1.12
VEGFA-208ENST00000417285 ARHGDIGQ99819 225 aa22.06■■□□□ 1.12
VEGFA-208ENST00000417285 ASPNQ9BXN1 380 aa22.06■■□□□ 1.12
VEGFA-208ENST00000417285 GPR35Q9HC97 309 aa22.06■■□□□ 1.12
VEGFA-208ENST00000417285 A0A096LPE4 126 aa22.05■■□□□ 1.12
VEGFA-208ENST00000417285 A0A1W2PPZ6 126 aa22.05■■□□□ 1.12
VEGFA-208ENST00000417285 VSTM5A8MXK1 200 aa22.05■■□□□ 1.12
VEGFA-208ENST00000417285 TPST2O60704 377 aa22.05■■□□□ 1.12
VEGFA-208ENST00000417285 OPN1SWP03999 348 aa22.05■■□□□ 1.12
VEGFA-208ENST00000417285 NQO1P15559 274 aaKnown RBP22.05■■□□□ 1.12
VEGFA-208ENST00000417285 CBLP22681 906 aa22.05■■□□□ 1.12
VEGFA-208ENST00000417285 PCGF2P35227 344 aa22.05■■□□□ 1.12
VEGFA-208ENST00000417285 CDH12P55289 794 aa22.05■■□□□ 1.12
VEGFA-208ENST00000417285 CYLC2Q14093 348 aaPredicted RBP22.05■■□□□ 1.12
VEGFA-208ENST00000417285 DUSP7Q16829 419 aa22.05■■□□□ 1.12
VEGFA-208ENST00000417285 TRMT5Q32P41 509 aaKnown RBP22.05■■□□□ 1.12
VEGFA-208ENST00000417285 ZNF613Q6PF04 617 aa22.05■■□□□ 1.12
VEGFA-208ENST00000417285 SCAIQ8N9R8 606 aa22.05■■□□□ 1.12
VEGFA-208ENST00000417285 OR10A6Q8NH74 314 aa22.05■■□□□ 1.12
VEGFA-208ENST00000417285 FBXO17Q96EF6 278 aa22.05■■□□□ 1.12
VEGFA-208ENST00000417285 SLC41A3Q96GZ6 507 aa22.05■■□□□ 1.12
VEGFA-208ENST00000417285 SH3GL1Q99961 368 aa22.05■■□□□ 1.12
VEGFA-208ENST00000417285 WFDC6Q9BQY6 131 aa22.05■■□□□ 1.12
VEGFA-208ENST00000417285 CA10Q9NS85 328 aa22.05■■□□□ 1.12
VEGFA-208ENST00000417285 FBXO9Q9UK97 447 aaPredicted RBP22.05■■□□□ 1.12
VEGFA-208ENST00000417285 ADAM21Q9UKJ8 722 aa22.05■■□□□ 1.12
VEGFA-208ENST00000417285 MS4A18H0YCH9 400 aa22.04■■□□□ 1.12
VEGFA-208ENST00000417285 M0R3H8 397 aa22.04■■□□□ 1.12
VEGFA-208ENST00000417285 PDE5AO76074 875 aa22.04■■□□□ 1.12
VEGFA-208ENST00000417285 IGLV1-44P01699 117 aa22.04■■□□□ 1.12
VEGFA-208ENST00000417285 CBR1P16152 277 aa22.04■■□□□ 1.12
VEGFA-208ENST00000417285 ARFIP2P53365 341 aa22.04■■□□□ 1.12
VEGFA-208ENST00000417285 SNRPD2P62316 118 aaKnown RBP22.04■■□□□ 1.12
VEGFA-208ENST00000417285 NAAAQ02083 359 aa22.04■■□□□ 1.12
VEGFA-208ENST00000417285 MS4A18Q3C1V0 323 aa22.04■■□□□ 1.12
VEGFA-208ENST00000417285 HIPK1Q86Z02 1210 aa22.04■■□□□ 1.12
VEGFA-208ENST00000417285 UEVLDQ8IX04 471 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms