RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 PRKACBP22694 351 aa14.02□□□□□ -0.16
SHMT2-202ENST00000414700 GADD45AP24522 165 aa14.02□□□□□ -0.16
SHMT2-202ENST00000414700 SPANXN2Q5MJ10 180 aa14.02□□□□□ -0.16
SHMT2-202ENST00000414700 C1QL3Q5VWW1 255 aa14.02□□□□□ -0.16
SHMT2-202ENST00000414700 SLC25A25Q6KCM7 469 aa14.02□□□□□ -0.16
SHMT2-202ENST00000414700 LRRC69Q6ZNQ3 347 aa14.02□□□□□ -0.16
SHMT2-202ENST00000414700 CCDC28AQ8IWP9 274 aa14.02□□□□□ -0.16
SHMT2-202ENST00000414700 ST8SIA1Q92185 356 aa14.02□□□□□ -0.16
SHMT2-202ENST00000414700 PTGES2Q9H7Z7 377 aa14.02□□□□□ -0.16
SHMT2-202ENST00000414700 RPRD1BQ9NQG5 326 aaKnown RBP14.02□□□□□ -0.16
SHMT2-202ENST00000414700 PLSCR3Q9NRY6 295 aa14.02□□□□□ -0.16
SHMT2-202ENST00000414700 TLN1Q9Y490 2541 aaKnown RBP14.02□□□□□ -0.17
SHMT2-202ENST00000414700 TMED7-TICAM2A0A0A6YYA0 188 aa14.02□□□□□ -0.17
SHMT2-202ENST00000414700 ZIC3O60481 467 aa14.02□□□□□ -0.17
SHMT2-202ENST00000414700 SOX14O95416 240 aa14.02□□□□□ -0.17
SHMT2-202ENST00000414700 IFI30P13284 250 aa14.02□□□□□ -0.17
SHMT2-202ENST00000414700 DPP4P27487 766 aa14.02□□□□□ -0.17
SHMT2-202ENST00000414700 SLC15A1P46059 708 aa14.02□□□□□ -0.17
SHMT2-202ENST00000414700 CRYZQ08257 329 aaKnown RBP14.02□□□□□ -0.17
SHMT2-202ENST00000414700 TBRG1Q3YBR2 411 aa14.02□□□□□ -0.17
SHMT2-202ENST00000414700 Q6ZPB1 254 aaPredicted RBP14.02□□□□□ -0.17
SHMT2-202ENST00000414700 TMEM234Q8WY98 164 aa14.02□□□□□ -0.17
SHMT2-202ENST00000414700 EXTL1Q92935 676 aa14.02□□□□□ -0.17
SHMT2-202ENST00000414700 FAM173AQ9BQD7 235 aa14.02□□□□□ -0.17
SHMT2-202ENST00000414700 TTYH2Q9BSA4 534 aa14.02□□□□□ -0.17
SHMT2-202ENST00000414700 OR11A1Q9GZK7 315 aa14.02□□□□□ -0.17
SHMT2-202ENST00000414700 UBQLN3Q9H347 655 aa14.02□□□□□ -0.17
SHMT2-202ENST00000414700 AASSQ9UDR5 926 aa14.02□□□□□ -0.17
SHMT2-202ENST00000414700 TMED7Q9Y3B3 224 aa14.02□□□□□ -0.17
SHMT2-202ENST00000414700 MED31Q9Y3C7 131 aa14.02□□□□□ -0.17
SHMT2-202ENST00000414700 TMEM72A0PK05 275 aa14.01□□□□□ -0.17
SHMT2-202ENST00000414700 ETV2O00321 342 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-202ENST00000414700 SUSD5O60279 629 aa14.01□□□□□ -0.17
SHMT2-202ENST00000414700 CBR3O75828 277 aa14.01□□□□□ -0.17
SHMT2-202ENST00000414700 ADAP00813 363 aa14.01□□□□□ -0.17
SHMT2-202ENST00000414700 PNMTP11086 282 aa14.01□□□□□ -0.17
SHMT2-202ENST00000414700 CXCR1P25024 350 aa14.01□□□□□ -0.17
SHMT2-202ENST00000414700 POLR2HP52434 150 aaKnown RBP14.01□□□□□ -0.17
SHMT2-202ENST00000414700 TMPRSS3P57727 454 aa14.01□□□□□ -0.17
SHMT2-202ENST00000414700 ALDH6A1Q02252 535 aaKnown RBP14.01□□□□□ -0.17
SHMT2-202ENST00000414700 TOMM20Q15388 145 aa14.01□□□□□ -0.17
SHMT2-202ENST00000414700 ZNF766Q5HY98 468 aa14.01□□□□□ -0.17
SHMT2-202ENST00000414700 CCDC190Q86UF4 302 aa14.01□□□□□ -0.17
SHMT2-202ENST00000414700 NOXA1Q86UR1 476 aa14.01□□□□□ -0.17
SHMT2-202ENST00000414700 FAM109AQ8N4B1 249 aa14.01□□□□□ -0.17
SHMT2-202ENST00000414700 PIGXQ8TBF5 258 aa14.01□□□□□ -0.17
SHMT2-202ENST00000414700 BPIFA2Q96DR5 249 aa14.01□□□□□ -0.17
SHMT2-202ENST00000414700 KTI12Q96EK9 354 aaPredicted RBP14.01□□□□□ -0.17
SHMT2-202ENST00000414700 CRELD1Q96HD1 420 aa14.01□□□□□ -0.17
SHMT2-202ENST00000414700 TMEM185BQ9H7F4 350 aa14.01□□□□□ -0.17
SHMT2-202ENST00000414700 ZFP64Q9NPA5 681 aa14.01□□□□□ -0.17
SHMT2-202ENST00000414700 DIABLOQ9NR28 239 aa14.01□□□□□ -0.17
SHMT2-202ENST00000414700 ACOXLQ9NUZ1 547 aa14.01□□□□□ -0.17
SHMT2-202ENST00000414700 REV1Q9UBZ9 1251 aa14.01□□□□□ -0.17
SHMT2-202ENST00000414700 MGAT4BQ9UQ53 548 aa14.01□□□□□ -0.17
SHMT2-202ENST00000414700 TRAPPC4Q9Y296 219 aa14.01□□□□□ -0.17
SHMT2-202ENST00000414700 ALPK2Q86TB3 2170 aa14□□□□□ -0.17
SHMT2-202ENST00000414700 A0A087WV48 116 aa14□□□□□ -0.17
SHMT2-202ENST00000414700 A8MV72 311 aaPredicted RBP14□□□□□ -0.17
SHMT2-202ENST00000414700 KLF4O43474 513 aa14□□□□□ -0.17
SHMT2-202ENST00000414700 OPN1LWP04000 364 aa14□□□□□ -0.17
SHMT2-202ENST00000414700 TP53P04637 393 aaPredicted RBP14□□□□□ -0.17
SHMT2-202ENST00000414700 CD46P15529 392 aa14□□□□□ -0.17
SHMT2-202ENST00000414700 RBM34P42696 430 aaKnown RBP14□□□□□ -0.17
SHMT2-202ENST00000414700 DSCR4P56555 118 aaPredicted RBP14□□□□□ -0.17
SHMT2-202ENST00000414700 CSNK2BP67870 215 aa14□□□□□ -0.17
SHMT2-202ENST00000414700 CXADRP78310 365 aa14□□□□□ -0.17
SHMT2-202ENST00000414700 SMN1Q16637 294 aaKnown RBP14□□□□□ -0.17
SHMT2-202ENST00000414700 AHSA2Q719I0 299 aa14□□□□□ -0.17
SHMT2-202ENST00000414700 SLC46A3Q7Z3Q1 461 aa14□□□□□ -0.17
SHMT2-202ENST00000414700 RNF113BQ8IZP6 322 aaKnown RBP14□□□□□ -0.17
SHMT2-202ENST00000414700 LRRC17Q8N6Y2 441 aa14□□□□□ -0.17
SHMT2-202ENST00000414700 ATP6V1C2Q8NEY4 427 aa14□□□□□ -0.17
SHMT2-202ENST00000414700 ZCCHC14Q8WYQ9 949 aaKnown RBP14□□□□□ -0.17
SHMT2-202ENST00000414700 SCMH1Q96GD3 660 aa14□□□□□ -0.17
SHMT2-202ENST00000414700 HS6ST2Q96MM7 605 aa14□□□□□ -0.17
SHMT2-202ENST00000414700 SDHCQ99643 169 aaPredicted RBP14□□□□□ -0.17
SHMT2-202ENST00000414700 GON7Q9BXV9 100 aa14□□□□□ -0.17
SHMT2-202ENST00000414700 ZNF556Q9HAH1 456 aa14□□□□□ -0.17
SHMT2-202ENST00000414700 NDRG4Q9ULP0 352 aaKnown RBP14□□□□□ -0.17
SHMT2-202ENST00000414700 TBC1D24Q9ULP9 559 aa14□□□□□ -0.17
SHMT2-202ENST00000414700 M0R082 166 aa14□□□□□ -0.17
SHMT2-202ENST00000414700 PEPDP12955 493 aa14□□□□□ -0.17
SHMT2-202ENST00000414700 RPS5P46782 204 aaKnown RBP14□□□□□ -0.17
SHMT2-202ENST00000414700 MEOX1P50221 254 aa14□□□□□ -0.17
SHMT2-202ENST00000414700 DLX5P56178 289 aa14□□□□□ -0.17
SHMT2-202ENST00000414700 TBCEQ15813 527 aaPredicted RBP14□□□□□ -0.17
SHMT2-202ENST00000414700 TBR1Q16650 682 aa14□□□□□ -0.17
SHMT2-202ENST00000414700 SLC25A53Q5H9E4 307 aa14□□□□□ -0.17
SHMT2-202ENST00000414700 PNPLA5Q7Z6Z6 429 aaPredicted RBP14□□□□□ -0.17
SHMT2-202ENST00000414700 YRDCQ86U90 279 aaKnown RBP14□□□□□ -0.17
SHMT2-202ENST00000414700 KIF18BQ86Y91 864 aa14□□□□□ -0.17
SHMT2-202ENST00000414700 LINC00471Q8N535 108 aa14□□□□□ -0.17
SHMT2-202ENST00000414700 ARL5BQ96KC2 179 aa14□□□□□ -0.17
SHMT2-202ENST00000414700 MRGPRX4Q96LA9 322 aa14□□□□□ -0.17
SHMT2-202ENST00000414700 C5orf34Q96MH7 638 aa14□□□□□ -0.17
SHMT2-202ENST00000414700 MOGAT1Q96PD6 335 aa14□□□□□ -0.17
SHMT2-202ENST00000414700 TTTY12Q9BZ98 90 aa14□□□□□ -0.17
SHMT2-202ENST00000414700 EGLN3Q9H6Z9 239 aa14□□□□□ -0.17
SHMT2-202ENST00000414700 C12orf10Q9HB07 376 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms