RNA–Protein interactions for RNA: ENST00000375023.3

NOTCH4-201, Transcript of notch 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH4, Length 6,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-201ENST00000375023 NAT6Q93015 286 aa13.64□□□□□ -0.23
NOTCH4-201ENST00000375023 LMF2Q9BU23 707 aaKnown RBP13.64□□□□□ -0.23
NOTCH4-201ENST00000375023 C20orf27Q9GZN8 174 aa13.64□□□□□ -0.23
NOTCH4-201ENST00000375023 PPT2Q9UMR5 302 aa13.64□□□□□ -0.23
NOTCH4-201ENST00000375023 CDHR4A6H8M9 788 aa13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 DVL1O14640 695 aa13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 DVL1P1P54792 670 aaPredicted RBP13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 MLF1P58340 268 aa13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 TNFRSF17Q02223 184 aa13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 KEAP1Q14145 624 aa13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 UBE2NLQ5JXB2 153 aa13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 FOXRED1Q96CU9 486 aaPredicted RBP13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 BIRC8Q96P09 236 aa13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 ATG4BQ9Y4P1 393 aa13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 CTDSP2O14595 271 aa13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 DPM1O60762 260 aa13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 SERPINF1P36955 418 aa13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 MPPED2Q15777 294 aa13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 BCL7AQ4VC05 210 aa13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 PLPP7Q8NBV4 271 aa13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 EMC6Q9BV81 110 aa13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 CLDN1O95832 211 aa13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 NME2P22392 152 aa13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 HTR3AP46098 478 aa13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 NDUFA6P56556 154 aa13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 ZNF691Q5VV52 312 aa13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 IL34Q6ZMJ4 242 aa13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 SYT13Q7L8C5 426 aa13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 PARP16Q8N5Y8 322 aa13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 MFSD9Q8NBP5 474 aa13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 PATE1Q8WXA2 126 aa13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 PGAP3Q96FM1 320 aaPredicted RBP13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 ZNF587Q96SQ5 575 aaPredicted RBP13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 TCEAL2Q9H3H9 227 aaPredicted RBP13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 UFSP2Q9NUQ7 469 aa13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 MRPS2Q9Y399 296 aaKnown RBP13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 TNFRSF10AO00220 468 aa13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 FZD7O75084 574 aa13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 RFPL3O75679 317 aa13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 ABHD16AO95870 558 aa13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 SHC1P29353 583 aa13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 OR4A16Q8NH70 328 aa13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 SLC38A5Q8WUX1 472 aa13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 FGGYQ96C11 551 aa13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 RANGRFQ9HD47 186 aaPredicted RBP13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 PDLIM7Q9NR12 457 aa13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 METTL15A6NJ78 407 aa13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 BLVRBP30043 206 aaPredicted RBP13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 METAP1DQ6UB28 335 aaPredicted RBP13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 TMEM207Q6UWW9 146 aa13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 YRDCQ86U90 279 aaKnown RBP13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 RNF128Q8TEB7 428 aa13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 ZNF419Q96HQ0 510 aaPredicted RBP13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 CHST11Q9NPF2 352 aa13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.63□□□□□ -0.23
NOTCH4-201ENST00000375023 DNAJC25-GNG10A0A024R161 153 aa13.62□□□□□ -0.23
NOTCH4-201ENST00000375023 ZFP82Q8N141 532 aa13.62□□□□□ -0.23
NOTCH4-201ENST00000375023 IER2Q9BTL4 223 aa13.62□□□□□ -0.23
NOTCH4-201ENST00000375023 WSB2Q9NYS7 404 aaPredicted RBP13.62□□□□□ -0.23
NOTCH4-201ENST00000375023 IGHV3-15A0A0B4J1V0 119 aa13.62□□□□□ -0.23
NOTCH4-201ENST00000375023 FUOMA2VDF0 154 aa13.62□□□□□ -0.23
NOTCH4-201ENST00000375023 NSA2O95478 260 aaKnown RBP13.62□□□□□ -0.23
NOTCH4-201ENST00000375023 ATXN1LP0C7T5 689 aaKnown RBP13.62□□□□□ -0.23
NOTCH4-201ENST00000375023 GLI4P10075 376 aa13.62□□□□□ -0.23
NOTCH4-201ENST00000375023 TPT1P13693 172 aaKnown RBP13.62□□□□□ -0.23
NOTCH4-201ENST00000375023 ZNF546Q86UE3 836 aa13.62□□□□□ -0.23
NOTCH4-201ENST00000375023 LAX1Q8IWV1 398 aa13.62□□□□□ -0.23
NOTCH4-201ENST00000375023 MRPL41Q8IXM3 137 aaKnown RBP13.62□□□□□ -0.23
NOTCH4-201ENST00000375023 DEFB108BQ8NET1 73 aa13.62□□□□□ -0.23
NOTCH4-201ENST00000375023 NDRG3Q9UGV2 375 aa13.62□□□□□ -0.23
NOTCH4-201ENST00000375023 TMED7-TICAM2A0A0A6YYA0 188 aa13.62□□□□□ -0.23
NOTCH4-201ENST00000375023 A0A1W2PS29 197 aa13.62□□□□□ -0.23
NOTCH4-201ENST00000375023 YIF1AO95070 293 aa13.62□□□□□ -0.23
NOTCH4-201ENST00000375023 TK1P04183 234 aa13.62□□□□□ -0.23
NOTCH4-201ENST00000375023 FGF4P08620 206 aa13.62□□□□□ -0.23
NOTCH4-201ENST00000375023 PIPP12273 146 aaPredicted RBP13.62□□□□□ -0.23
NOTCH4-201ENST00000375023 PRDX1Q06830 199 aaKnown RBP13.62□□□□□ -0.23
NOTCH4-201ENST00000375023 C6orf15Q6UXA7 325 aaPredicted RBP13.62□□□□□ -0.23
NOTCH4-201ENST00000375023 KHSRPQ92945 711 aaKnown RBP eCLIP13.62□□□□□ -0.23
NOTCH4-201ENST00000375023 PDXPQ96GD0 296 aa13.62□□□□□ -0.23
NOTCH4-201ENST00000375023 ZNF286AQ9HBT8 521 aa13.62□□□□□ -0.23
NOTCH4-201ENST00000375023 TXNL4BQ9NX01 149 aaKnown RBP13.62□□□□□ -0.23
NOTCH4-201ENST00000375023 CLEC1BQ9P126 229 aa13.62□□□□□ -0.23
NOTCH4-201ENST00000375023 TMED7Q9Y3B3 224 aa13.62□□□□□ -0.23
NOTCH4-201ENST00000375023 A0A1B0GTW7 788 aa13.62□□□□□ -0.23
NOTCH4-201ENST00000375023 AKR7A3O95154 331 aa13.62□□□□□ -0.23
NOTCH4-201ENST00000375023 IRS1P35568 1242 aa13.62□□□□□ -0.23
NOTCH4-201ENST00000375023 SLC1A3P43003 542 aa13.62□□□□□ -0.23
NOTCH4-201ENST00000375023 OR2B11Q5JQS5 317 aa13.62□□□□□ -0.23
NOTCH4-201ENST00000375023 TRNP1Q6NT89 227 aa13.62□□□□□ -0.23
NOTCH4-201ENST00000375023 NOXA1Q86UR1 476 aa13.62□□□□□ -0.23
NOTCH4-201ENST00000375023 SLC43A2Q8N370 569 aa13.62□□□□□ -0.23
NOTCH4-201ENST00000375023 OR4N2Q8NGD1 307 aa13.62□□□□□ -0.23
NOTCH4-201ENST00000375023 HRASLS5Q96KN8 279 aa13.62□□□□□ -0.23
NOTCH4-201ENST00000375023 OCSTAMPQ9BR26 566 aa13.62□□□□□ -0.23
NOTCH4-201ENST00000375023 ALG12Q9BV10 488 aa13.62□□□□□ -0.23
NOTCH4-201ENST00000375023 MRI1Q9BV20 369 aa13.62□□□□□ -0.23
NOTCH4-201ENST00000375023 BABAM2Q9NXR7 383 aa13.62□□□□□ -0.23
NOTCH4-201ENST00000375023 TMEM202A6NGA9 273 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms