RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 SRSF1Q07955 248 aaKnown RBP eCLIP11.06□□□□□ -0.647e-6■□□□□ 10.7
NIF3L1-201ENST00000359683 PUDPQ08623 228 aa11.06□□□□□ -0.64
NIF3L1-201ENST00000359683 MRPL49Q13405 166 aaKnown RBP11.06□□□□□ -0.64
NIF3L1-201ENST00000359683 SLC17A1Q14916 467 aa11.06□□□□□ -0.64
NIF3L1-201ENST00000359683 RNPS1Q15287 305 aaKnown RBP11.06□□□□□ -0.64
NIF3L1-201ENST00000359683 POU4F3Q15319 338 aa11.06□□□□□ -0.64
NIF3L1-201ENST00000359683 LRRC36Q1X8D7 754 aa11.06□□□□□ -0.64
NIF3L1-201ENST00000359683 RFX4Q33E94 735 aa11.06□□□□□ -0.64
NIF3L1-201ENST00000359683 GTF2IRD2BQ6EKJ0 949 aa11.06□□□□□ -0.64
NIF3L1-201ENST00000359683 SMARCD3Q6STE5 483 aa11.06□□□□□ -0.64
NIF3L1-201ENST00000359683 ZNF620Q6ZNG0 422 aa11.06□□□□□ -0.64
NIF3L1-201ENST00000359683 PXKQ7Z7A4 578 aa11.06□□□□□ -0.64
NIF3L1-201ENST00000359683 GTF2IRD2Q86UP8 949 aa11.06□□□□□ -0.64
NIF3L1-201ENST00000359683 PACRGLQ8N7B6 248 aa11.06□□□□□ -0.64
NIF3L1-201ENST00000359683 MBD3L2Q8NHZ7 208 aaPredicted RBP11.06□□□□□ -0.64
NIF3L1-201ENST00000359683 MAGEE2Q8TD90 523 aaPredicted RBP11.06□□□□□ -0.64
NIF3L1-201ENST00000359683 ENKD1Q9H0I2 346 aa11.06□□□□□ -0.64
NIF3L1-201ENST00000359683 OR52D1Q9H346 318 aa11.06□□□□□ -0.64
NIF3L1-201ENST00000359683 KRT84Q9NSB2 600 aa11.06□□□□□ -0.64
NIF3L1-201ENST00000359683 TINAGQ9UJW2 476 aa11.06□□□□□ -0.64
NIF3L1-201ENST00000359683 ING1Q9UK53 422 aaPredicted RBP11.06□□□□□ -0.64
NIF3L1-201ENST00000359683 POFUT2Q9Y2G5 429 aa11.06□□□□□ -0.64
NIF3L1-201ENST00000359683 CDH10Q9Y6N8 788 aa11.06□□□□□ -0.64
NIF3L1-201ENST00000359683 IGKV3D-15A0A087WSY6 115 aa11.05□□□□□ -0.64
NIF3L1-201ENST00000359683 MITFO75030 526 aaPredicted RBP11.05□□□□□ -0.64
NIF3L1-201ENST00000359683 AHCYP23526 432 aa11.05□□□□□ -0.64
NIF3L1-201ENST00000359683 IGFBP5P24593 272 aa11.05□□□□□ -0.64
NIF3L1-201ENST00000359683 TIMP3P35625 211 aa11.05□□□□□ -0.64
NIF3L1-201ENST00000359683 CA7P43166 264 aa11.05□□□□□ -0.64
NIF3L1-201ENST00000359683 RASGEF1BQ0VAM2 473 aa11.05□□□□□ -0.64
NIF3L1-201ENST00000359683 ALG10Q5BKT4 473 aa11.05□□□□□ -0.64
NIF3L1-201ENST00000359683 FBXW10Q5XX13 1052 aa11.05□□□□□ -0.64
NIF3L1-201ENST00000359683 RPL13AP3Q6NVV1 102 aa11.05□□□□□ -0.64
NIF3L1-201ENST00000359683 B3GNT6Q6ZMB0 384 aa11.05□□□□□ -0.64
NIF3L1-201ENST00000359683 THSD4Q6ZMP0 1018 aa11.05□□□□□ -0.64
NIF3L1-201ENST00000359683 P4HA3Q7Z4N8 544 aa11.05□□□□□ -0.64
NIF3L1-201ENST00000359683 C9orf106Q8NAJ2 232 aa11.05□□□□□ -0.64
NIF3L1-201ENST00000359683 ABHD3Q8WU67 409 aa11.05□□□□□ -0.64
NIF3L1-201ENST00000359683 GPX7Q96SL4 187 aaPredicted RBP11.05□□□□□ -0.64
NIF3L1-201ENST00000359683 TM9SF2Q99805 663 aa11.05□□□□□ -0.64
NIF3L1-201ENST00000359683 TTYH2Q9BSA4 534 aa11.05□□□□□ -0.64
NIF3L1-201ENST00000359683 EGLN3Q9H6Z9 239 aa11.05□□□□□ -0.64
NIF3L1-201ENST00000359683 BCO1Q9HAY6 547 aa11.05□□□□□ -0.64
NIF3L1-201ENST00000359683 GP6Q9HCN6 339 aa11.05□□□□□ -0.64
NIF3L1-201ENST00000359683 GLRX2Q9NS18 164 aa11.05□□□□□ -0.64
NIF3L1-201ENST00000359683 KLHL9Q9P2J3 617 aa11.05□□□□□ -0.64
NIF3L1-201ENST00000359683 KLHL13Q9P2N7 655 aa11.05□□□□□ -0.64
NIF3L1-201ENST00000359683 OSGIN2Q9Y236 505 aa11.05□□□□□ -0.64
NIF3L1-201ENST00000359683 NOX1Q9Y5S8 564 aa11.05□□□□□ -0.64
NIF3L1-201ENST00000359683 MED12LQ86YW9 2145 aa11.04□□□□□ -0.64
NIF3L1-201ENST00000359683 ZNF724A8MTY0 619 aa11.04□□□□□ -0.64
NIF3L1-201ENST00000359683 E9PLN8 166 aa11.04□□□□□ -0.64
NIF3L1-201ENST00000359683 C11orf98E9PRG8 122 aa11.04□□□□□ -0.64
NIF3L1-201ENST00000359683 RNF13O43567 381 aa11.04□□□□□ -0.64
NIF3L1-201ENST00000359683 TOXO94900 526 aa11.04□□□□□ -0.64
NIF3L1-201ENST00000359683 F13BP05160 661 aa11.04□□□□□ -0.64
NIF3L1-201ENST00000359683 IGFBP1P08833 259 aaPredicted RBP11.04□□□□□ -0.64
NIF3L1-201ENST00000359683 GLI4P10075 376 aa11.04□□□□□ -0.64
NIF3L1-201ENST00000359683 HLA-DOBP13765 273 aa11.04□□□□□ -0.64
NIF3L1-201ENST00000359683 CEACAM8P31997 349 aaPredicted RBP11.04□□□□□ -0.64
NIF3L1-201ENST00000359683 CASP6P55212 293 aa11.04□□□□□ -0.64
NIF3L1-201ENST00000359683 ESRRGP62508 458 aa11.04□□□□□ -0.64
NIF3L1-201ENST00000359683 TAF11Q15544 211 aa11.04□□□□□ -0.64
NIF3L1-201ENST00000359683 C3P1Q6ZMU1 363 aa11.04□□□□□ -0.64
NIF3L1-201ENST00000359683 DPY19L2P2Q6ZN68 376 aa11.04□□□□□ -0.64
NIF3L1-201ENST00000359683 CREB3L2Q70SY1 520 aa11.04□□□□□ -0.64
NIF3L1-201ENST00000359683 GALNT5Q7Z7M9 940 aa11.04□□□□□ -0.64
NIF3L1-201ENST00000359683 RPRMLQ8N4K4 120 aa11.04□□□□□ -0.64
NIF3L1-201ENST00000359683 ZIC4Q8N9L1 334 aa11.04□□□□□ -0.64
NIF3L1-201ENST00000359683 ANKK1Q8NFD2 765 aa11.04□□□□□ -0.64
NIF3L1-201ENST00000359683 OR9K2Q8NGE7 335 aa11.04□□□□□ -0.64
NIF3L1-201ENST00000359683 OR8D4Q8NGM9 314 aa11.04□□□□□ -0.64
NIF3L1-201ENST00000359683 FANK1Q8TC84 345 aa11.04□□□□□ -0.64
NIF3L1-201ENST00000359683 SAMD8Q96LT4 415 aa11.04□□□□□ -0.64
NIF3L1-201ENST00000359683 VKORC1Q9BQB6 163 aa11.04□□□□□ -0.64
NIF3L1-201ENST00000359683 PLA2G12AQ9BZM1 189 aa11.04□□□□□ -0.64
NIF3L1-201ENST00000359683 RASSF4Q9H2L5 321 aa11.04□□□□□ -0.64
NIF3L1-201ENST00000359683 INIPQ9NRY2 104 aa11.04□□□□□ -0.64
NIF3L1-201ENST00000359683 FLVCR1Q9Y5Y0 555 aa11.04□□□□□ -0.64
NIF3L1-201ENST00000359683 ARHGAP21Q5T5U3 1957 aa11.04□□□□□ -0.64
NIF3L1-201ENST00000359683 ESPL1Q14674 2120 aa11.03□□□□□ -0.64
NIF3L1-201ENST00000359683 ALPK2Q86TB3 2170 aa11.03□□□□□ -0.64
NIF3L1-201ENST00000359683 TRGV8A0A0C4DH27 118 aa11.03□□□□□ -0.64
NIF3L1-201ENST00000359683 NPIPB13A6NJU9 1138 aa11.03□□□□□ -0.64
NIF3L1-201ENST00000359683 NPIPB4C9JG80 1138 aa11.03□□□□□ -0.64
NIF3L1-201ENST00000359683 MCIDASD6RGH6 385 aa11.03□□□□□ -0.64
NIF3L1-201ENST00000359683 DLGAP1O14490 977 aa11.03□□□□□ -0.64
NIF3L1-201ENST00000359683 GPR171O14626 319 aa11.03□□□□□ -0.64
NIF3L1-201ENST00000359683 TRAF3IP2O43734 574 aaPredicted RBP11.03□□□□□ -0.64
NIF3L1-201ENST00000359683 SOX14O95416 240 aa11.03□□□□□ -0.64
NIF3L1-201ENST00000359683 CD14P08571 375 aa11.03□□□□□ -0.64
NIF3L1-201ENST00000359683 ZNF43P17038 809 aa11.03□□□□□ -0.64
NIF3L1-201ENST00000359683 SLC6A6P31641 620 aa11.03□□□□□ -0.64
NIF3L1-201ENST00000359683 PTDSS1P48651 473 aaKnown RBP11.03□□□□□ -0.64
NIF3L1-201ENST00000359683 CRISP1P54107 249 aa11.03□□□□□ -0.64
NIF3L1-201ENST00000359683 RAD23AP54725 363 aa11.03□□□□□ -0.64
NIF3L1-201ENST00000359683 CTXN1P60606 82 aa11.03□□□□□ -0.64
NIF3L1-201ENST00000359683 IL1RL1Q01638 556 aa11.03□□□□□ -0.64
NIF3L1-201ENST00000359683 GUSBP1Q15486 140 aa11.03□□□□□ -0.64
NIF3L1-201ENST00000359683 SLC36A3Q495N2 470 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms