RNA–Protein interactions for RNA: ENST00000358552.7

NFIX-201, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-201ENST00000358552 PPP1R3DO95685 299 aa12.04□□□□□ -0.48
NFIX-201ENST00000358552 BGLAPP02818 100 aa12.04□□□□□ -0.48
NFIX-201ENST00000358552 BLVRAP53004 296 aa12.04□□□□□ -0.48
NFIX-201ENST00000358552 SLC25A1P53007 311 aa12.04□□□□□ -0.48
NFIX-201ENST00000358552 GPR50Q13585 617 aa12.04□□□□□ -0.48
NFIX-201ENST00000358552 DESI1Q6ICB0 168 aa12.04□□□□□ -0.48
NFIX-201ENST00000358552 ZNF544Q6NX49 715 aa12.04□□□□□ -0.48
NFIX-201ENST00000358552 PLCZ1Q86YW0 608 aa12.04□□□□□ -0.48
NFIX-201ENST00000358552 KLHL36Q8N4N3 616 aa12.04□□□□□ -0.48
NFIX-201ENST00000358552 FADS6Q8N9I5 356 aa12.04□□□□□ -0.48
NFIX-201ENST00000358552 FAM98AQ8NCA5 519 aaKnown RBP12.04□□□□□ -0.48
NFIX-201ENST00000358552 OR52N1Q8NH53 320 aa12.04□□□□□ -0.48
NFIX-201ENST00000358552 KIAA1143Q96AT1 154 aaPredicted RBP12.04□□□□□ -0.48
NFIX-201ENST00000358552 TEAD3Q99594 435 aa12.04□□□□□ -0.48
NFIX-201ENST00000358552 MED18Q9BUE0 208 aa12.04□□□□□ -0.48
NFIX-201ENST00000358552 SMURF1Q9HCE7 757 aa12.04□□□□□ -0.48
NFIX-201ENST00000358552 MRPL39Q9NYK5 338 aaKnown RBP12.04□□□□□ -0.48
NFIX-201ENST00000358552 FBXL4Q9UKA2 621 aa12.04□□□□□ -0.48
NFIX-201ENST00000358552 GSTK1Q9Y2Q3 226 aa12.04□□□□□ -0.48
NFIX-201ENST00000358552 LSM2Q9Y333 95 aaKnown RBP12.04□□□□□ -0.48
NFIX-201ENST00000358552 CAB39Q9Y376 341 aaPredicted RBP12.04□□□□□ -0.48
NFIX-201ENST00000358552 TERTO14746 1132 aaKnown RBP12.03□□□□□ -0.48
NFIX-201ENST00000358552 SLC30A4O14863 429 aa12.03□□□□□ -0.48
NFIX-201ENST00000358552 DXOO77932 396 aaKnown RBP12.03□□□□□ -0.48
NFIX-201ENST00000358552 GAAP10253 952 aa12.03□□□□□ -0.48
NFIX-201ENST00000358552 GTF2E2P29084 291 aaKnown RBP12.03□□□□□ -0.48
NFIX-201ENST00000358552 PTGDSP41222 190 aa12.03□□□□□ -0.48
NFIX-201ENST00000358552 ZP4Q12836 540 aa12.03□□□□□ -0.48
NFIX-201ENST00000358552 ZNF362Q5T0B9 420 aaPredicted RBP12.03□□□□□ -0.48
NFIX-201ENST00000358552 SLC35F1Q5T1Q4 408 aa12.03□□□□□ -0.48
NFIX-201ENST00000358552 FAM205BPQ63HN1 556 aa12.03□□□□□ -0.48
NFIX-201ENST00000358552 C16orf47Q6ZP98 133 aaPredicted RBP12.03□□□□□ -0.48
NFIX-201ENST00000358552 JAZF1Q86VZ6 243 aa12.03□□□□□ -0.48
NFIX-201ENST00000358552 OR52E2Q8NGJ4 325 aa12.03□□□□□ -0.48
NFIX-201ENST00000358552 PTP4A1Q93096 173 aa12.03□□□□□ -0.48
NFIX-201ENST00000358552 TAAR8Q969N4 342 aa12.03□□□□□ -0.48
NFIX-201ENST00000358552 KTI12Q96EK9 354 aaPredicted RBP12.03□□□□□ -0.48
NFIX-201ENST00000358552 RNF31Q96EP0 1072 aa12.03□□□□□ -0.48
NFIX-201ENST00000358552 TMEM41AQ96HV5 264 aa12.03□□□□□ -0.48
NFIX-201ENST00000358552 OPALINQ96PE5 141 aa12.03□□□□□ -0.48
NFIX-201ENST00000358552 MNTQ99583 582 aa12.03□□□□□ -0.48
NFIX-201ENST00000358552 SH2D2AQ9NP31 389 aa12.03□□□□□ -0.48
NFIX-201ENST00000358552 EXOSC4Q9NPD3 245 aaKnown RBP12.03□□□□□ -0.48
NFIX-201ENST00000358552 FOXJ2Q9P0K8 574 aa12.03□□□□□ -0.48
NFIX-201ENST00000358552 IL20RAQ9UHF4 553 aa12.03□□□□□ -0.48
NFIX-201ENST00000358552 NOX1Q9Y5S8 564 aa12.03□□□□□ -0.48
NFIX-201ENST00000358552 SDK2Q58EX2 2172 aa12.03□□□□□ -0.48
NFIX-201ENST00000358552 TMEM72A0PK05 275 aa12.03□□□□□ -0.48
NFIX-201ENST00000358552 AKAP8O43823 692 aaKnown RBP12.03□□□□□ -0.48
NFIX-201ENST00000358552 FZD7O75084 574 aa12.03□□□□□ -0.48
NFIX-201ENST00000358552 TRAPPC2P0DI81 140 aa12.03□□□□□ -0.48
NFIX-201ENST00000358552 TRAPPC2BP0DI82 140 aa12.03□□□□□ -0.48
NFIX-201ENST00000358552 PTBP1P26599 531 aaKnown RBP eCLIP12.03□□□□□ -0.487e-6■■■■□ 20.2
NFIX-201ENST00000358552 CASRP41180 1078 aa12.03□□□□□ -0.48
NFIX-201ENST00000358552 RPS5P46782 204 aaKnown RBP12.03□□□□□ -0.48
NFIX-201ENST00000358552 DSCR4P56555 118 aaPredicted RBP12.03□□□□□ -0.48
NFIX-201ENST00000358552 CLDN6P56747 220 aa12.03□□□□□ -0.48
NFIX-201ENST00000358552 CTXN1P60606 82 aa12.03□□□□□ -0.48
NFIX-201ENST00000358552 RPS7P62081 194 aaKnown RBP12.03□□□□□ -0.48
NFIX-201ENST00000358552 HSF2Q03933 536 aa12.03□□□□□ -0.48
NFIX-201ENST00000358552 GGTLC2Q14390 218 aa12.03□□□□□ -0.48
NFIX-201ENST00000358552 TOMM34Q15785 309 aaPredicted RBP12.03□□□□□ -0.48
NFIX-201ENST00000358552 C3orf33Q6P1S2 294 aa12.03□□□□□ -0.48
NFIX-201ENST00000358552 IL20RBQ6UXL0 311 aa12.03□□□□□ -0.48
NFIX-201ENST00000358552 LRRC75AQ8NAA5 344 aa12.03□□□□□ -0.48
NFIX-201ENST00000358552 ADPRHL1Q8NDY3 354 aa12.03□□□□□ -0.48
NFIX-201ENST00000358552 OTULINQ96BN8 352 aa12.03□□□□□ -0.48
NFIX-201ENST00000358552 NTNG2Q96CW9 530 aa12.03□□□□□ -0.48
NFIX-201ENST00000358552 C1GALT1C1Q96EU7 318 aa12.03□□□□□ -0.48
NFIX-201ENST00000358552 KATNB1Q9BVA0 655 aa12.03□□□□□ -0.48
NFIX-201ENST00000358552 ENKD1Q9H0I2 346 aa12.03□□□□□ -0.48
NFIX-201ENST00000358552 FANCFQ9NPI8 374 aa12.03□□□□□ -0.48
NFIX-201ENST00000358552 MED11Q9P086 117 aa12.03□□□□□ -0.48
NFIX-201ENST00000358552 B3GALT5Q9Y2C3 310 aa12.03□□□□□ -0.48
NFIX-201ENST00000358552 EXPH5Q8NEV8 1989 aa12.02□□□□□ -0.48
NFIX-201ENST00000358552 AHCTF1Q8WYP5 2266 aa12.02□□□□□ -0.49
NFIX-201ENST00000358552 MCIDASD6RGH6 385 aa12.02□□□□□ -0.49
NFIX-201ENST00000358552 J3QRE1 110 aa12.02□□□□□ -0.49
NFIX-201ENST00000358552 XKRYO14609 159 aa12.02□□□□□ -0.49
NFIX-201ENST00000358552 CBR3O75828 277 aa12.02□□□□□ -0.49
NFIX-201ENST00000358552 RENP00797 406 aa12.02□□□□□ -0.49
NFIX-201ENST00000358552 P04436 131 aa12.02□□□□□ -0.49
NFIX-201ENST00000358552 KRT8P05787 483 aa12.02□□□□□ -0.49
NFIX-201ENST00000358552 OR2T7P0C7T2 308 aa12.02□□□□□ -0.49
NFIX-201ENST00000358552 HIST1H1CP16403 213 aaKnown RBP12.02□□□□□ -0.49
NFIX-201ENST00000358552 CPEP16870 476 aa12.02□□□□□ -0.49
NFIX-201ENST00000358552 CD53P19397 219 aa12.02□□□□□ -0.49
NFIX-201ENST00000358552 GALP22466 123 aa12.02□□□□□ -0.49
NFIX-201ENST00000358552 CFL1P23528 166 aaKnown RBP12.02□□□□□ -0.49
NFIX-201ENST00000358552 AQP2P41181 271 aa12.02□□□□□ -0.49
NFIX-201ENST00000358552 TAS2R43P59537 309 aa12.02□□□□□ -0.49
NFIX-201ENST00000358552 SCN1BQ07699 218 aa12.02□□□□□ -0.49
NFIX-201ENST00000358552 AIMP2Q13155 320 aaKnown RBP12.02□□□□□ -0.49
NFIX-201ENST00000358552 SELENBP1Q13228 472 aa12.02□□□□□ -0.49
NFIX-201ENST00000358552 CRMP1Q14194 572 aa12.02□□□□□ -0.49
NFIX-201ENST00000358552 PLPPR5Q32ZL2 321 aa12.02□□□□□ -0.49
NFIX-201ENST00000358552 CCDC92Q53HC0 331 aaPredicted RBP12.02□□□□□ -0.49
NFIX-201ENST00000358552 FAM122BQ7Z309 247 aa12.02□□□□□ -0.49
NFIX-201ENST00000358552 HDDC2Q7Z4H3 204 aa12.02□□□□□ -0.49
NFIX-201ENST00000358552 LRRC17Q8N6Y2 441 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms