RNA–Protein interactions for RNA: ENST00000308077.9

PTCD2-201, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 1 (best)

Gene PTCD2, Length 2,195 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-201ENST00000308077 NIPAL3Q6P499 406 aa6.26□□□□□ -1.41
PTCD2-201ENST00000308077 HIST3H2AQ7L7L0 130 aa6.26□□□□□ -1.41
PTCD2-201ENST00000308077 SULF2Q8IWU5 870 aa6.26□□□□□ -1.41
PTCD2-201ENST00000308077 STX19Q8N4C7 294 aa6.26□□□□□ -1.41
PTCD2-201ENST00000308077 SLC37A3Q8NCC5 494 aa6.26□□□□□ -1.41
PTCD2-201ENST00000308077 SDR9C7Q8NEX9 313 aa6.26□□□□□ -1.41
PTCD2-201ENST00000308077 OR2M7Q8NG81 312 aa6.26□□□□□ -1.41
PTCD2-201ENST00000308077 OR52E2Q8NGJ4 325 aa6.26□□□□□ -1.41
PTCD2-201ENST00000308077 OR4K13Q8NH42 304 aa6.26□□□□□ -1.41
PTCD2-201ENST00000308077 MFSD8Q8NHS3 518 aa6.26□□□□□ -1.41
PTCD2-201ENST00000308077 HIST1H2ACQ93077 130 aa6.26□□□□□ -1.41
PTCD2-201ENST00000308077 KISS1RQ969F8 398 aaPredicted RBP6.26□□□□□ -1.41
PTCD2-201ENST00000308077 MYDGFQ969H8 173 aa6.26□□□□□ -1.41
PTCD2-201ENST00000308077 MUL1Q969V5 352 aa6.26□□□□□ -1.41
PTCD2-201ENST00000308077 LGALS12Q96DT0 336 aa6.26□□□□□ -1.41
PTCD2-201ENST00000308077 Q96M85 177 aa6.26□□□□□ -1.41
PTCD2-201ENST00000308077 AGAP4Q96P64 663 aa6.26□□□□□ -1.41
PTCD2-201ENST00000308077 TSPAN32Q96QS1 320 aa6.26□□□□□ -1.41
PTCD2-201ENST00000308077 DDOQ99489 341 aa6.26□□□□□ -1.41
PTCD2-201ENST00000308077 POTEKPQ9BYX7 375 aa6.26□□□□□ -1.41
PTCD2-201ENST00000308077 NAA50Q9GZZ1 169 aaKnown RBP6.26□□□□□ -1.41
PTCD2-201ENST00000308077 POLHQ9Y253 713 aa6.26□□□□□ -1.41
PTCD2-201ENST00000308077 RPL36Q9Y3U8 105 aaKnown RBP6.26□□□□□ -1.41
PTCD2-201ENST00000308077 KIAA1549Q9HCM3 1950 aa6.26□□□□□ -1.41
PTCD2-201ENST00000308077 A0A1W2PNR3 127 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 OR2M5A3KFT3 312 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 OR5H15A6NDH6 313 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 RIIAD1A6NNX1 92 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 MS4A18H0YCH9 400 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 PLPP3O14495 311 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 WIPF1O43516 503 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 INMTO95050 263 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 ADORA3P0DMS8 318 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 SLC2A5P22732 501 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 SRD5A2P31213 254 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 SFTPDP35247 375 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 IDUAP35475 653 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 CCL11P51671 97 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 MAP2K6P52564 334 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 GP2P55259 537 aaKnown RBP6.25□□□□□ -1.41
PTCD2-201ENST00000308077 MYBPHQ13203 477 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 MFAP5Q13361 173 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 DEFB109BQ30KR1 87 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 MS4A18Q3C1V0 323 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 RAET1LQ5VY80 246 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 B3GLCTQ6Y288 498 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 CCDC81Q6ZN84 652 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 YRDCQ86U90 279 aaKnown RBP6.25□□□□□ -1.41
PTCD2-201ENST00000308077 GHDCQ8N2G8 530 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 NPEPL1Q8NDH3 523 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 FDCSPQ8NFU4 85 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 OR52I1Q8NGK6 324 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 KCNE4Q8WWG9 221 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 OTULINQ96BN8 352 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 RNFT2Q96EX2 444 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 FAM173AQ9BQD7 235 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 FAM192AQ9GZU8 254 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 ZFP64Q9NPA5 681 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 ACOT13Q9NPJ3 140 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 SERINC1Q9NRX5 453 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 MRPS18AQ9NVS2 196 aaKnown RBP6.25□□□□□ -1.41
PTCD2-201ENST00000308077 MRPL39Q9NYK5 338 aaKnown RBP6.25□□□□□ -1.41
PTCD2-201ENST00000308077 KLHL21Q9UJP4 597 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 SLC6A5Q9Y345 797 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 COMMD3-BMI1R4GMX3 469 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 AKAP13Q12802 2813 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 OR6C68A6NDL8 312 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 PRR23D1E9PI22 279 aaPredicted RBP6.25□□□□□ -1.41
PTCD2-201ENST00000308077 RNF13O43567 381 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 AKR7A3O95154 331 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 TXNDC12O95881 172 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 PLGP00747 810 aaPredicted RBP6.25□□□□□ -1.41
PTCD2-201ENST00000308077 PTHP01270 115 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 GYPBP06028 91 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 LCKP06239 509 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 PRR23D2P0DMB1 279 aaPredicted RBP6.25□□□□□ -1.41
PTCD2-201ENST00000308077 HLA-DOBP13765 273 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 APEHP13798 732 aaKnown RBP6.25□□□□□ -1.41
PTCD2-201ENST00000308077 ZNF17P17021 662 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 ZNF3P17036 446 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 KLK2P20151 261 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 ACVR2AP27037 513 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 PCSK6P29122 969 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 HTR1FP30939 366 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 SDHAP31040 664 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 RFC3P40938 356 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 CDKN2AP42771 156 aaKnown RBP6.25□□□□□ -1.41
PTCD2-201ENST00000308077 MTNR1AP48039 350 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 P2RY4P51582 365 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 TBCEQ15813 527 aaPredicted RBP6.25□□□□□ -1.41
PTCD2-201ENST00000308077 TMEM176BQ3YBM2 270 aaPredicted RBP6.25□□□□□ -1.41
PTCD2-201ENST00000308077 MESTQ5EB52 335 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 PAQR6Q6TCH4 344 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 B3GNT6Q6ZMB0 384 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 SHFQ7M4L6 423 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 GID4Q8IVV7 300 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 WDFY1Q8IWB7 410 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 KDM8Q8N371 416 aa6.25□□□□□ -1.41
PTCD2-201ENST00000308077 FAM98AQ8NCA5 519 aaKnown RBP6.25□□□□□ -1.41
PTCD2-201ENST00000308077 FAM83FQ8NEG4 500 aaPredicted RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms