RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 C1orf189Q5VU69 101 aa14.95□□□□□ -0.02
CTCF-201ENST00000264010 TMED4Q7Z7H5 227 aa14.95□□□□□ -0.02
CTCF-201ENST00000264010 ZNF676Q8N7Q3 588 aa14.95□□□□□ -0.02
CTCF-201ENST00000264010 SRRQ9GZT4 340 aa14.95□□□□□ -0.02
CTCF-201ENST00000264010 MUTYHQ9UIF7 546 aa14.95□□□□□ -0.02
CTCF-201ENST00000264010 F8W036 122 aa14.94□□□□□ -0.02
CTCF-201ENST00000264010 ZNF264O43296 627 aa14.94□□□□□ -0.02
CTCF-201ENST00000264010 NR0B1P51843 470 aaKnown RBP14.94□□□□□ -0.02
CTCF-201ENST00000264010 BLOC1S1P78537 153 aa14.94□□□□□ -0.02
CTCF-201ENST00000264010 CORO6Q6QEF8 472 aa14.94□□□□□ -0.02
CTCF-201ENST00000264010 KIRREL2Q6UWL6 708 aa14.94□□□□□ -0.02
CTCF-201ENST00000264010 PRR22Q8IZ63 422 aa14.94□□□□□ -0.02
CTCF-201ENST00000264010 LILRB1Q8NHL6 650 aaPredicted RBP14.94□□□□□ -0.02
CTCF-201ENST00000264010 ABHD4Q8TB40 342 aa14.94□□□□□ -0.02
CTCF-201ENST00000264010 TMEM185BQ9H7F4 350 aa14.94□□□□□ -0.02
CTCF-201ENST00000264010 RASD1Q9Y272 281 aa14.94□□□□□ -0.02
CTCF-201ENST00000264010 H0YIG0 161 aa14.94□□□□□ -0.02
CTCF-201ENST00000264010 SHC1P29353 583 aa14.94□□□□□ -0.02
CTCF-201ENST00000264010 CBX5P45973 191 aa14.94□□□□□ -0.02
CTCF-201ENST00000264010 GFERP55789 205 aa14.94□□□□□ -0.02
CTCF-201ENST00000264010 OR12D2P58182 307 aa14.94□□□□□ -0.02
CTCF-201ENST00000264010 NKAIN2Q5VXU1 208 aa14.94□□□□□ -0.02
CTCF-201ENST00000264010 C19orf48Q6RUI8 117 aa14.94□□□□□ -0.02
CTCF-201ENST00000264010 NXPE2Q96DL1 559 aa14.94□□□□□ -0.02
CTCF-201ENST00000264010 SYNPO2LQ9H987 977 aa14.94□□□□□ -0.02
CTCF-201ENST00000264010 SLC23A1Q9UHI7 598 aa14.94□□□□□ -0.02
CTCF-201ENST00000264010 LAMP5Q9UJQ1 280 aa14.94□□□□□ -0.02
CTCF-201ENST00000264010 CPED1A4D0V7 1026 aa14.94□□□□□ -0.02
CTCF-201ENST00000264010 METTL12A8MUP2 240 aa14.94□□□□□ -0.02
CTCF-201ENST00000264010 AGPAT2O15120 278 aa14.94□□□□□ -0.02
CTCF-201ENST00000264010 NME1P15531 152 aaKnown RBP14.94□□□□□ -0.02
CTCF-201ENST00000264010 CSNK1EP49674 416 aaKnown RBP14.94□□□□□ -0.02
CTCF-201ENST00000264010 DCAF7P61962 342 aa14.94□□□□□ -0.02
CTCF-201ENST00000264010 HBMQ6B0K9 141 aa14.94□□□□□ -0.02
CTCF-201ENST00000264010 C12orf45Q8N5I9 185 aaPredicted RBP14.94□□□□□ -0.02
CTCF-201ENST00000264010 OR2T4Q8NH00 348 aa14.94□□□□□ -0.02
CTCF-201ENST00000264010 TRMT10AQ8TBZ6 339 aaKnown RBP14.94□□□□□ -0.02
CTCF-201ENST00000264010 BARHL1Q9BZE3 327 aa14.94□□□□□ -0.02
CTCF-201ENST00000264010 ISG20L2Q9H9L3 353 aaKnown RBP14.94□□□□□ -0.02
CTCF-201ENST00000264010 OR2S2Q9NQN1 319 aa14.94□□□□□ -0.02
CTCF-201ENST00000264010 SLC6A5Q9Y345 797 aa14.94□□□□□ -0.02
CTCF-201ENST00000264010 C1orf196B1AJZ1 125 aa14.93□□□□□ -0.02
CTCF-201ENST00000264010 AHSA1O95433 338 aa14.93□□□□□ -0.02
CTCF-201ENST00000264010 CD53P19397 219 aa14.93□□□□□ -0.02
CTCF-201ENST00000264010 HSD11B2P80365 405 aa14.93□□□□□ -0.02
CTCF-201ENST00000264010 MRGPREQ86SM8 312 aa14.93□□□□□ -0.02
CTCF-201ENST00000264010 GHSRQ92847 366 aa14.93□□□□□ -0.02
CTCF-201ENST00000264010 LURAP1Q96LR2 239 aa14.93□□□□□ -0.02
CTCF-201ENST00000264010 DNAJB12Q9NXW2 375 aaKnown RBP14.93□□□□□ -0.02
CTCF-201ENST00000264010 OR2W5A6NFC9 320 aa14.93□□□□□ -0.02
CTCF-201ENST00000264010 SCO2O43819 266 aa14.93□□□□□ -0.02
CTCF-201ENST00000264010 ZIC2O95409 532 aaPredicted RBP14.93□□□□□ -0.02
CTCF-201ENST00000264010 TFPIP10646 304 aa14.93□□□□□ -0.02
CTCF-201ENST00000264010 GRPRP30550 384 aa14.93□□□□□ -0.02
CTCF-201ENST00000264010 HES5Q5TA89 166 aa14.93□□□□□ -0.02
CTCF-201ENST00000264010 FHL5Q5TD97 284 aa14.93□□□□□ -0.02
CTCF-201ENST00000264010 THSD4Q6ZMP0 1018 aa14.93□□□□□ -0.02
CTCF-201ENST00000264010 C3P1Q6ZMU1 363 aa14.93□□□□□ -0.02
CTCF-201ENST00000264010 LRRC28Q86X40 367 aaPredicted RBP14.93□□□□□ -0.02
CTCF-201ENST00000264010 TMEM185AQ8NFB2 350 aa14.93□□□□□ -0.02
CTCF-201ENST00000264010 THEM6Q8WUY1 208 aa14.93□□□□□ -0.02
CTCF-201ENST00000264010 LCORQ96JN0 433 aaPredicted RBP14.93□□□□□ -0.02
CTCF-201ENST00000264010 LRFN5Q96NI6 719 aa14.93□□□□□ -0.02
CTCF-201ENST00000264010 HTTP42858 3142 aa14.93□□□□□ -0.02
CTCF-201ENST00000264010 UTS2O95399 124 aa14.93□□□□□ -0.02
CTCF-201ENST00000264010 RPS5P46782 204 aaKnown RBP14.93□□□□□ -0.02
CTCF-201ENST00000264010 CTBP2P56545 445 aa14.93□□□□□ -0.02
CTCF-201ENST00000264010 SF3A2Q15428 464 aaKnown RBP14.93□□□□□ -0.02
CTCF-201ENST00000264010 PRTGQ2VWP7 1150 aa14.93□□□□□ -0.02
CTCF-201ENST00000264010 ZAR1Q86SH2 424 aa14.93□□□□□ -0.02
CTCF-201ENST00000264010 ZNF680Q8NEM1 530 aa14.93□□□□□ -0.02
CTCF-201ENST00000264010 OR6N2Q8NGY6 317 aa14.93□□□□□ -0.02
CTCF-201ENST00000264010 FLVCR1-AS1Q8TAF5 88 aa14.93□□□□□ -0.02
CTCF-201ENST00000264010 TRMT61AQ96FX7 289 aaKnown RBP14.93□□□□□ -0.02
CTCF-201ENST00000264010 C5orf34Q96MH7 638 aa14.93□□□□□ -0.02
CTCF-201ENST00000264010 PRSS27Q9BQR3 290 aa14.93□□□□□ -0.02
CTCF-201ENST00000264010 OR10A4Q9H209 315 aa14.93□□□□□ -0.02
CTCF-201ENST00000264010 NPAP1Q9NZP6 1156 aa14.93□□□□□ -0.02
CTCF-201ENST00000264010 FAM171A2A8MVW0 826 aa14.92□□□□□ -0.02
CTCF-201ENST00000264010 IGHA1P01876 353 aa14.92□□□□□ -0.02
CTCF-201ENST00000264010 IFI6P09912 130 aa14.92□□□□□ -0.02
CTCF-201ENST00000264010 MAPK3P27361 379 aaPredicted RBP14.92□□□□□ -0.02
CTCF-201ENST00000264010 DDOSTP39656 456 aa14.92□□□□□ -0.02
CTCF-201ENST00000264010 PSG6Q00889 435 aa14.92□□□□□ -0.02
CTCF-201ENST00000264010 KRT77Q7Z794 578 aa14.92□□□□□ -0.02
CTCF-201ENST00000264010 CCNL2Q96S94 520 aaPredicted RBP14.92□□□□□ -0.02
CTCF-201ENST00000264010 NMNAT3Q96T66 252 aa14.92□□□□□ -0.02
CTCF-201ENST00000264010 TRAF4Q9BUZ4 470 aaPredicted RBP14.92□□□□□ -0.02
CTCF-201ENST00000264010 MS4A7Q9GZW8 240 aaPredicted RBP14.92□□□□□ -0.02
CTCF-201ENST00000264010 DHCR7Q9UBM7 475 aaKnown RBP14.92□□□□□ -0.02
CTCF-201ENST00000264010 TMEM14AQ9Y6G1 99 aa14.92□□□□□ -0.02
CTCF-201ENST00000264010 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.92□□□□□ -0.02
CTCF-201ENST00000264010 C11orf98E9PRG8 122 aa14.92□□□□□ -0.02
CTCF-201ENST00000264010 PTBP1P26599 531 aaKnown RBP eCLIP14.92□□□□□ -0.02
CTCF-201ENST00000264010 ASAH1Q13510 395 aa14.92□□□□□ -0.02
CTCF-201ENST00000264010 GRK1Q15835 563 aa14.92□□□□□ -0.02
CTCF-201ENST00000264010 BAK1Q16611 211 aa14.92□□□□□ -0.02
CTCF-201ENST00000264010 TSEN15Q8WW01 171 aaKnown RBP14.92□□□□□ -0.02
CTCF-201ENST00000264010 ACTR6Q9GZN1 396 aa14.92□□□□□ -0.02
CTCF-201ENST00000264010 LRRK1Q38SD2 2015 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms