RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 CELA3BP08861 270 aa11.51□□□□□ -0.57
COPS3-214ENST00000577246 ZNF43P17038 809 aa11.51□□□□□ -0.57
COPS3-214ENST00000577246 NR4A1P22736 598 aa11.51□□□□□ -0.57
COPS3-214ENST00000577246 GTF2E2P29084 291 aaKnown RBP11.51□□□□□ -0.57
COPS3-214ENST00000577246 ALDH3A1P30838 453 aa11.51□□□□□ -0.57
COPS3-214ENST00000577246 ARF1P84077 181 aaKnown RBP11.51□□□□□ -0.57
COPS3-214ENST00000577246 MYBPC1Q00872 1141 aa11.51□□□□□ -0.57
COPS3-214ENST00000577246 DPY19L1Q2PZI1 675 aa11.51□□□□□ -0.57
COPS3-214ENST00000577246 AWAT1Q58HT5 328 aa11.51□□□□□ -0.57
COPS3-214ENST00000577246 ZNF311Q5JNZ3 666 aa11.51□□□□□ -0.57
COPS3-214ENST00000577246 MRPL2Q5T653 305 aaKnown RBP11.51□□□□□ -0.57
COPS3-214ENST00000577246 WBP2NLQ6ICG8 309 aa11.51□□□□□ -0.57
COPS3-214ENST00000577246 KRT80Q6KB66 452 aa11.51□□□□□ -0.57
COPS3-214ENST00000577246 LRRC74BQ6ZQY2 392 aa11.51□□□□□ -0.57
COPS3-214ENST00000577246 ZCCHC23Q6ZST2 131 aa11.51□□□□□ -0.57
COPS3-214ENST00000577246 HMGN2P46Q86SG4 172 aa11.51□□□□□ -0.57
COPS3-214ENST00000577246 PEX5LQ8IYB4 626 aa11.51□□□□□ -0.57
COPS3-214ENST00000577246 C4orf33Q8N1A6 199 aa11.51□□□□□ -0.57
COPS3-214ENST00000577246 GPR137CQ8N3F9 429 aa11.51□□□□□ -0.57
COPS3-214ENST00000577246 C17orf53Q8N3J3 647 aaPredicted RBP11.51□□□□□ -0.57
COPS3-214ENST00000577246 TRIML2Q8N7C3 387 aa11.51□□□□□ -0.57
COPS3-214ENST00000577246 ZIM3Q96PE6 472 aa11.51□□□□□ -0.57
COPS3-214ENST00000577246 RACGAP1Q9H0H5 632 aa11.51□□□□□ -0.57
COPS3-214ENST00000577246 NARFLQ9H6Q4 476 aa11.51□□□□□ -0.57
COPS3-214ENST00000577246 TENM1Q9UKZ4 2725 aa11.51□□□□□ -0.57
COPS3-214ENST00000577246 MGAM2Q2M2H8 2515 aa11.5□□□□□ -0.57
COPS3-214ENST00000577246 A0A0G2JMP0 313 aa11.5□□□□□ -0.57
COPS3-214ENST00000577246 A0A0X1KG70 313 aa11.5□□□□□ -0.57
COPS3-214ENST00000577246 HMGN4O00479 90 aa11.5□□□□□ -0.57
COPS3-214ENST00000577246 PPIHO43447 177 aaKnown RBP11.5□□□□□ -0.57
COPS3-214ENST00000577246 FRS3O43559 492 aa11.5□□□□□ -0.57
COPS3-214ENST00000577246 AHSA1O95433 338 aa11.5□□□□□ -0.57
COPS3-214ENST00000577246 CPSF4O95639 269 aaKnown RBP11.5□□□□□ -0.57
COPS3-214ENST00000577246 IGFBP1P08833 259 aaPredicted RBP11.5□□□□□ -0.57
COPS3-214ENST00000577246 TFPTP0C1Z6 253 aa11.5□□□□□ -0.57
COPS3-214ENST00000577246 P2RY4P51582 365 aa11.5□□□□□ -0.57
COPS3-214ENST00000577246 FOXL1Q12952 345 aa11.5□□□□□ -0.57
COPS3-214ENST00000577246 TRMT5Q32P41 509 aaKnown RBP11.5□□□□□ -0.57
COPS3-214ENST00000577246 MMEL1Q495T6 779 aa11.5□□□□□ -0.57
COPS3-214ENST00000577246 PDLIM3Q53GG5 364 aaPredicted RBP11.5□□□□□ -0.57
COPS3-214ENST00000577246 ELFN2Q5R3F8 820 aa11.5□□□□□ -0.57
COPS3-214ENST00000577246 C1orf140Q5VVS0 124 aa11.5□□□□□ -0.57
COPS3-214ENST00000577246 LINGO2Q7L985 606 aa11.5□□□□□ -0.57
COPS3-214ENST00000577246 ANKRD46Q86W74 232 aa11.5□□□□□ -0.57
COPS3-214ENST00000577246 EPHX4Q8IUS5 362 aa11.5□□□□□ -0.57
COPS3-214ENST00000577246 BPIFB2Q8N4F0 458 aa11.5□□□□□ -0.57
COPS3-214ENST00000577246 PIK3C3Q8NEB9 887 aa11.5□□□□□ -0.57
COPS3-214ENST00000577246 OR4M2Q8NGB6 313 aa11.5□□□□□ -0.57
COPS3-214ENST00000577246 SLC35A5Q9BS91 424 aa11.5□□□□□ -0.57
COPS3-214ENST00000577246 ZNF747Q9BV97 191 aa11.5□□□□□ -0.57
COPS3-214ENST00000577246 TXLNGYQ9BZA5 131 aa11.5□□□□□ -0.57
COPS3-214ENST00000577246 SLC38A1Q9H2H9 487 aa11.5□□□□□ -0.57
COPS3-214ENST00000577246 ZNF385DQ9H6B1 395 aa11.5□□□□□ -0.57
COPS3-214ENST00000577246 MKS1Q9NXB0 559 aa11.5□□□□□ -0.57
COPS3-214ENST00000577246 TREM2Q9NZC2 230 aa11.5□□□□□ -0.57
COPS3-214ENST00000577246 ZNF346Q9UL40 294 aaKnown RBP11.5□□□□□ -0.57
COPS3-214ENST00000577246 SMIM23A6NLE4 172 aa11.49□□□□□ -0.57
COPS3-214ENST00000577246 ZNF99A8MXY4 864 aaPredicted RBP11.49□□□□□ -0.57
COPS3-214ENST00000577246 TMEM229AB2RXF0 380 aa11.49□□□□□ -0.57
COPS3-214ENST00000577246 J3QLI3 93 aa11.49□□□□□ -0.57
COPS3-214ENST00000577246 TMPRSS2O15393 492 aa11.49□□□□□ -0.57
COPS3-214ENST00000577246 ZNF432O94892 652 aa11.49□□□□□ -0.57
COPS3-214ENST00000577246 NR2F1P10589 423 aa11.49□□□□□ -0.57
COPS3-214ENST00000577246 NCF2P19878 526 aaPredicted RBP11.49□□□□□ -0.57
COPS3-214ENST00000577246 RPS4Y1P22090 263 aaKnown RBP11.49□□□□□ -0.57
COPS3-214ENST00000577246 GLRXP35754 106 aa11.49□□□□□ -0.57
COPS3-214ENST00000577246 CLDN17P56750 224 aa11.49□□□□□ -0.57
COPS3-214ENST00000577246 GALK2Q01415 458 aa11.49□□□□□ -0.57
COPS3-214ENST00000577246 C1DQ13901 141 aaKnown RBP11.49□□□□□ -0.57
COPS3-214ENST00000577246 LIN52Q52LA3 116 aa11.49□□□□□ -0.57
COPS3-214ENST00000577246 GKAP1Q5VSY0 366 aaPredicted RBP11.49□□□□□ -0.57
COPS3-214ENST00000577246 ACSM5Q6NUN0 579 aa11.49□□□□□ -0.57
COPS3-214ENST00000577246 C1QL2Q7Z5L3 287 aa11.49□□□□□ -0.57
COPS3-214ENST00000577246 MDP1Q86V88 176 aa11.49□□□□□ -0.57
COPS3-214ENST00000577246 MYPOPQ86VE0 399 aaPredicted RBP11.49□□□□□ -0.57
COPS3-214ENST00000577246 CADM2Q8N3J6 435 aa11.49□□□□□ -0.57
COPS3-214ENST00000577246 RIBC1Q8N443 379 aaPredicted RBP11.49□□□□□ -0.57
COPS3-214ENST00000577246 MFSD8Q8NHS3 518 aa11.49□□□□□ -0.57
COPS3-214ENST00000577246 NANPQ8TBE9 248 aa11.49□□□□□ -0.57
COPS3-214ENST00000577246 MGARPQ8TDB4 240 aa11.49□□□□□ -0.57
COPS3-214ENST00000577246 STK35Q8TDR2 534 aa11.49□□□□□ -0.57
COPS3-214ENST00000577246 TESCQ96BS2 214 aa11.49□□□□□ -0.57
COPS3-214ENST00000577246 RAB39BQ96DA2 213 aa11.49□□□□□ -0.57
COPS3-214ENST00000577246 APOPT1Q96IL0 206 aa11.49□□□□□ -0.57
COPS3-214ENST00000577246 MRPL37Q9BZE1 423 aaKnown RBP11.49□□□□□ -0.57
COPS3-214ENST00000577246 ARMC7Q9H6L4 198 aa11.49□□□□□ -0.57
COPS3-214ENST00000577246 NTN4Q9HB63 628 aa11.49□□□□□ -0.57
COPS3-214ENST00000577246 CACYBPQ9HB71 228 aaKnown RBP11.49□□□□□ -0.57
COPS3-214ENST00000577246 GPR35Q9HC97 309 aa11.49□□□□□ -0.57
COPS3-214ENST00000577246 ZNF275Q9NSD4 429 aaPredicted RBP11.49□□□□□ -0.57
COPS3-214ENST00000577246 DDX28Q9NUL7 540 aaKnown RBP11.49□□□□□ -0.57
COPS3-214ENST00000577246 GPR160Q9UJ42 338 aa11.49□□□□□ -0.57
COPS3-214ENST00000577246 FBXL3Q9UKT7 428 aa11.49□□□□□ -0.57
COPS3-214ENST00000577246 DYSFO75923 2080 aa11.48□□□□□ -0.57
COPS3-214ENST00000577246 LOC105371242A0A075B767 164 aa11.48□□□□□ -0.57
COPS3-214ENST00000577246 HPXP02790 462 aa11.48□□□□□ -0.57
COPS3-214ENST00000577246 NUDT17P0C025 328 aa11.48□□□□□ -0.57
COPS3-214ENST00000577246 FAM153BP0C7A2 387 aa11.48□□□□□ -0.57
COPS3-214ENST00000577246 FPR2P25090 351 aa11.48□□□□□ -0.57
COPS3-214ENST00000577246 LSP1P33241 339 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms