RNA–Protein interactions for RNA: ENST00000548171.1

GATC-202, Transcript of glutamyl-tRNA amidotransferase subunit C, humanhuman

TSL 2

Gene GATC, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GATC-202ENST00000548171 GKN3PP0CG01 181 aa17.3■□□□□ 0.36
GATC-202ENST00000548171 LBPP18428 481 aa17.3■□□□□ 0.36
GATC-202ENST00000548171 EVX1P49640 407 aa17.3■□□□□ 0.36
GATC-202ENST00000548171 IL1RL1Q01638 556 aa17.3■□□□□ 0.36
GATC-202ENST00000548171 DAG1Q14118 895 aa17.3■□□□□ 0.36
GATC-202ENST00000548171 LIN52Q52LA3 116 aa17.3■□□□□ 0.36
GATC-202ENST00000548171 ZNF836Q6ZNA1 936 aa17.3■□□□□ 0.36
GATC-202ENST00000548171 MYPOPQ86VE0 399 aaPredicted RBP17.3■□□□□ 0.36
GATC-202ENST00000548171 NUDCD3Q8IVD9 361 aa17.3■□□□□ 0.36
GATC-202ENST00000548171 KIRREL3Q8IZU9 778 aa17.3■□□□□ 0.36
GATC-202ENST00000548171 ZNF781Q8N8C0 355 aa17.3■□□□□ 0.36
GATC-202ENST00000548171 SEMA6DQ8NFY4 1073 aa17.3■□□□□ 0.36
GATC-202ENST00000548171 MFSD8Q8NHS3 518 aa17.3■□□□□ 0.36
GATC-202ENST00000548171 STK35Q8TDR2 534 aa17.3■□□□□ 0.36
GATC-202ENST00000548171 METTL17Q9H7H0 456 aaPredicted RBP17.3■□□□□ 0.36
GATC-202ENST00000548171 CALML5Q9NZT1 146 aa17.3■□□□□ 0.36
GATC-202ENST00000548171 DSPPQ9NZW4 1301 aa17.29■□□□□ 0.36
GATC-202ENST00000548171 VENTXO95231 258 aa17.29■□□□□ 0.36
GATC-202ENST00000548171 AHSA1O95433 338 aa17.29■□□□□ 0.36
GATC-202ENST00000548171 IGFBP1P08833 259 aaPredicted RBP17.29■□□□□ 0.36
GATC-202ENST00000548171 ZNF43P17038 809 aa17.29■□□□□ 0.36
GATC-202ENST00000548171 NCF2P19878 526 aaPredicted RBP17.29■□□□□ 0.36
GATC-202ENST00000548171 ETV4P43268 484 aa17.29■□□□□ 0.36
GATC-202ENST00000548171 COMPP49747 757 aaPredicted RBP17.29■□□□□ 0.36
GATC-202ENST00000548171 NPRL3Q12980 569 aa17.29■□□□□ 0.36
GATC-202ENST00000548171 SNTB2Q13425 540 aaKnown RBP17.29■□□□□ 0.36
GATC-202ENST00000548171 CCNIQ14094 377 aa17.29■□□□□ 0.36
GATC-202ENST00000548171 RNF220Q5VTB9 566 aa17.29■□□□□ 0.36
GATC-202ENST00000548171 CDK20Q8IZL9 346 aa17.29■□□□□ 0.36
GATC-202ENST00000548171 GPR137CQ8N3F9 429 aa17.29■□□□□ 0.36
GATC-202ENST00000548171 OR52P1PQ8NH57 321 aa17.29■□□□□ 0.36
GATC-202ENST00000548171 MS4A5Q9H3V2 200 aa17.29■□□□□ 0.36
GATC-202ENST00000548171 ARMC7Q9H6L4 198 aa17.29■□□□□ 0.36
GATC-202ENST00000548171 NOX3Q9HBY0 568 aa17.29■□□□□ 0.36
GATC-202ENST00000548171 CRLF2Q9HC73 371 aa17.29■□□□□ 0.36
GATC-202ENST00000548171 GPR35Q9HC97 309 aa17.29■□□□□ 0.36
GATC-202ENST00000548171 P2RX2Q9UBL9 471 aa17.29■□□□□ 0.36
GATC-202ENST00000548171 USP22Q9UPT9 525 aa17.29■□□□□ 0.36
GATC-202ENST00000548171 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.29■□□□□ 0.36
GATC-202ENST00000548171 CMAHPQ9Y471 501 aa17.29■□□□□ 0.36
GATC-202ENST00000548171 FTCDNL1E5RQL4 147 aa17.28■□□□□ 0.36
GATC-202ENST00000548171 ITM2AO43736 263 aa17.28■□□□□ 0.36
GATC-202ENST00000548171 KRT75O95678 551 aa17.28■□□□□ 0.36
GATC-202ENST00000548171 SERPINE1P05121 402 aa17.28■□□□□ 0.36
GATC-202ENST00000548171 PNMTP11086 282 aa17.28■□□□□ 0.36
GATC-202ENST00000548171 NR4A1P22736 598 aa17.28■□□□□ 0.36
GATC-202ENST00000548171 GTF2E2P29084 291 aaKnown RBP17.28■□□□□ 0.36
GATC-202ENST00000548171 RPL14P50914 215 aaKnown RBP17.28■□□□□ 0.36
GATC-202ENST00000548171 CLDN17P56750 224 aa17.28■□□□□ 0.36
GATC-202ENST00000548171 ACTG1P63261 375 aa17.28■□□□□ 0.36
GATC-202ENST00000548171 LARS2Q15031 903 aaKnown RBP17.28■□□□□ 0.36
GATC-202ENST00000548171 SLC9B1Q4ZJI4 515 aa17.28■□□□□ 0.36
GATC-202ENST00000548171 COX20Q5RI15 118 aa17.28■□□□□ 0.36
GATC-202ENST00000548171 REP15Q6BDI9 236 aa17.28■□□□□ 0.36
GATC-202ENST00000548171 ZNF621Q6ZSS3 439 aa17.28■□□□□ 0.36
GATC-202ENST00000548171 SGMS2Q8NHU3 365 aa17.28■□□□□ 0.36
GATC-202ENST00000548171 ZNF418Q8TF45 676 aaPredicted RBP17.28■□□□□ 0.36
GATC-202ENST00000548171 TMEM186Q96B77 213 aa17.28■□□□□ 0.36
GATC-202ENST00000548171 OXGR1Q96P68 337 aa17.28■□□□□ 0.36
GATC-202ENST00000548171 OR52E6Q96RD3 313 aa17.28■□□□□ 0.36
GATC-202ENST00000548171 RAP2CQ9Y3L5 183 aa17.28■□□□□ 0.36
GATC-202ENST00000548171 GRIP1Q9Y3R0 1128 aa17.28■□□□□ 0.36
GATC-202ENST00000548171 ZNF99A8MXY4 864 aaPredicted RBP17.27■□□□□ 0.36
GATC-202ENST00000548171 LYNX1G3V0Z9 82 aa17.27■□□□□ 0.36
GATC-202ENST00000548171 M0R233 179 aa17.27■□□□□ 0.36
GATC-202ENST00000548171 SYNGR3O43761 229 aa17.27■□□□□ 0.36
GATC-202ENST00000548171 TYROBPO43914 113 aa17.27■□□□□ 0.36
GATC-202ENST00000548171 LYNX1P0DP58 116 aa17.27■□□□□ 0.36
GATC-202ENST00000548171 CRISP3P54108 245 aa17.27■□□□□ 0.36
GATC-202ENST00000548171 ABCE1P61221 599 aaKnown RBP17.27■□□□□ 0.36
GATC-202ENST00000548171 IFFO1Q0D2I5 559 aa17.27■□□□□ 0.36
GATC-202ENST00000548171 MAPK11Q15759 364 aa17.27■□□□□ 0.36
GATC-202ENST00000548171 CEACAM16Q2WEN9 425 aa17.27■□□□□ 0.36
GATC-202ENST00000548171 OGFOD2Q6N063 350 aa17.27■□□□□ 0.36
GATC-202ENST00000548171 SHQ1Q6PI26 577 aaKnown RBP17.27■□□□□ 0.36
GATC-202ENST00000548171 VRK2Q86Y07 508 aa17.27■□□□□ 0.36
GATC-202ENST00000548171 TEX29Q8N6K0 151 aa17.27■□□□□ 0.36
GATC-202ENST00000548171 PNPT1Q8TCS8 783 aaKnown RBP17.27■□□□□ 0.36
GATC-202ENST00000548171 MRPL24Q96A35 216 aaKnown RBP17.27■□□□□ 0.36
GATC-202ENST00000548171 ROPN1BQ9BZX4 212 aaPredicted RBP17.27■□□□□ 0.36
GATC-202ENST00000548171 ROPN1Q9HAT0 212 aaPredicted RBP17.27■□□□□ 0.36
GATC-202ENST00000548171 HIF1ANQ9NWT6 349 aa17.27■□□□□ 0.36
GATC-202ENST00000548171 REV1Q9UBZ9 1251 aa17.27■□□□□ 0.36
GATC-202ENST00000548171 ZNF232Q9UNY5 417 aa17.27■□□□□ 0.36
GATC-202ENST00000548171 SPEF1Q9Y4P9 236 aa17.27■□□□□ 0.36
GATC-202ENST00000548171 MGAM2Q2M2H8 2515 aa17.26■□□□□ 0.35
GATC-202ENST00000548171 ZNF503-AS2A6NEH8 195 aa17.26■□□□□ 0.35
GATC-202ENST00000548171 AKAP8O43823 692 aaKnown RBP17.26■□□□□ 0.35
GATC-202ENST00000548171 TFP02787 698 aa17.26■□□□□ 0.35
GATC-202ENST00000548171 ACHEP22303 614 aa17.26■□□□□ 0.35
GATC-202ENST00000548171 CDKN2CP42773 168 aa17.26■□□□□ 0.35
GATC-202ENST00000548171 CAPZA2P47755 286 aa17.26■□□□□ 0.35
GATC-202ENST00000548171 KRT80Q6KB66 452 aa17.26■□□□□ 0.35
GATC-202ENST00000548171 MDP1Q86V88 176 aa17.26■□□□□ 0.35
GATC-202ENST00000548171 KDM8Q8N371 416 aa17.26■□□□□ 0.35
GATC-202ENST00000548171 C3orf56Q8N813 242 aa17.26■□□□□ 0.35
GATC-202ENST00000548171 PIK3C3Q8NEB9 887 aa17.26■□□□□ 0.35
GATC-202ENST00000548171 SLC25A36Q96CQ1 311 aa17.26■□□□□ 0.35
GATC-202ENST00000548171 PTDSS2Q9BVG9 487 aa17.26■□□□□ 0.35
GATC-202ENST00000548171 RACGAP1Q9H0H5 632 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms