RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 HEXAP06865 529 aa11.47□□□□□ -0.57
TNFRSF1A-215ENST00000543359 GRPRP30550 384 aa11.47□□□□□ -0.57
TNFRSF1A-215ENST00000543359 CDKN1AP38936 164 aa11.47□□□□□ -0.57
TNFRSF1A-215ENST00000543359 CDH11P55287 796 aa11.47□□□□□ -0.57
TNFRSF1A-215ENST00000543359 NPTX1Q15818 432 aa11.47□□□□□ -0.57
TNFRSF1A-215ENST00000543359 NRF1Q16656 503 aa11.47□□□□□ -0.57
TNFRSF1A-215ENST00000543359 MS4A18Q3C1V0 323 aa11.47□□□□□ -0.57
TNFRSF1A-215ENST00000543359 HIKESHIQ53FT3 197 aa11.47□□□□□ -0.57
TNFRSF1A-215ENST00000543359 ALG10BQ5I7T1 473 aa11.47□□□□□ -0.57
TNFRSF1A-215ENST00000543359 C1QTNF12Q5T7M4 302 aa11.47□□□□□ -0.57
TNFRSF1A-215ENST00000543359 C11orf71Q6IPW1 123 aa11.47□□□□□ -0.57
TNFRSF1A-215ENST00000543359 ULK3Q6PHR2 472 aa11.47□□□□□ -0.57
TNFRSF1A-215ENST00000543359 TMEM108Q6UXF1 575 aa11.47□□□□□ -0.57
TNFRSF1A-215ENST00000543359 TSPYL5Q86VY4 417 aaPredicted RBP11.47□□□□□ -0.57
TNFRSF1A-215ENST00000543359 SMYD1Q8NB12 490 aa11.47□□□□□ -0.57
TNFRSF1A-215ENST00000543359 C11orf65Q8NCR3 313 aa11.47□□□□□ -0.57
TNFRSF1A-215ENST00000543359 BHLHE22Q8NFJ8 381 aaPredicted RBP11.47□□□□□ -0.57
TNFRSF1A-215ENST00000543359 BCL2L2Q92843 193 aaPredicted RBP11.47□□□□□ -0.57
TNFRSF1A-215ENST00000543359 SLC25A36Q96CQ1 311 aa11.47□□□□□ -0.57
TNFRSF1A-215ENST00000543359 SLC41A3Q96GZ6 507 aa11.47□□□□□ -0.57
TNFRSF1A-215ENST00000543359 TMEM120AQ9BXJ8 343 aa11.47□□□□□ -0.57
TNFRSF1A-215ENST00000543359 NELFAQ9H3P2 528 aa11.47□□□□□ -0.57
TNFRSF1A-215ENST00000543359 RPS6KB2Q9UBS0 482 aa11.47□□□□□ -0.57
TNFRSF1A-215ENST00000543359 TESQ9UGI8 421 aaKnown RBP11.47□□□□□ -0.57
TNFRSF1A-215ENST00000543359 MGAT4BQ9UQ53 548 aa11.47□□□□□ -0.57
TNFRSF1A-215ENST00000543359 ARFGEF3Q5TH69 2177 aa11.46□□□□□ -0.57
TNFRSF1A-215ENST00000543359 TRAV36DV7A0A075B6V5 113 aa11.46□□□□□ -0.57
TNFRSF1A-215ENST00000543359 RPL36A-HNRNPH2H7BZ11 118 aa11.46□□□□□ -0.57
TNFRSF1A-215ENST00000543359 M0R082 166 aa11.46□□□□□ -0.57
TNFRSF1A-215ENST00000543359 TRAF3IP2O43734 574 aaPredicted RBP11.46□□□□□ -0.57
TNFRSF1A-215ENST00000543359 OR2T1O43869 369 aa11.46□□□□□ -0.57
TNFRSF1A-215ENST00000543359 NDUFS7O75251 213 aa11.46□□□□□ -0.57
TNFRSF1A-215ENST00000543359 HPRP00739 348 aa11.46□□□□□ -0.57
TNFRSF1A-215ENST00000543359 IGHV4-39P01824 125 aa11.46□□□□□ -0.57
TNFRSF1A-215ENST00000543359 BGLAPP02818 100 aa11.46□□□□□ -0.57
TNFRSF1A-215ENST00000543359 THY1P04216 161 aa11.46□□□□□ -0.57
TNFRSF1A-215ENST00000543359 CD247P20963 164 aa11.46□□□□□ -0.57
TNFRSF1A-215ENST00000543359 CDH12P55289 794 aa11.46□□□□□ -0.57
TNFRSF1A-215ENST00000543359 RGS8P57771 180 aaPredicted RBP11.46□□□□□ -0.57
TNFRSF1A-215ENST00000543359 TGFBR3Q03167 851 aa11.46□□□□□ -0.57
TNFRSF1A-215ENST00000543359 TNK1Q13470 666 aa11.46□□□□□ -0.57
TNFRSF1A-215ENST00000543359 FAM69AQ5T7M9 428 aa11.46□□□□□ -0.57
TNFRSF1A-215ENST00000543359 NANOGP8Q6NSW7 305 aa11.46□□□□□ -0.57
TNFRSF1A-215ENST00000543359 KLHL17Q6TDP4 642 aa11.46□□□□□ -0.57
TNFRSF1A-215ENST00000543359 C5orf46Q6UWT4 87 aa11.46□□□□□ -0.57
TNFRSF1A-215ENST00000543359 CLEC9AQ6UXN8 241 aa11.46□□□□□ -0.57
TNFRSF1A-215ENST00000543359 H1FNTQ75WM6 255 aaPredicted RBP11.46□□□□□ -0.57
TNFRSF1A-215ENST00000543359 CALHM3Q86XJ0 350 aa11.46□□□□□ -0.57
TNFRSF1A-215ENST00000543359 RBM45Q8IUH3 476 aaKnown RBP11.46□□□□□ -0.57
TNFRSF1A-215ENST00000543359 WDFY1Q8IWB7 410 aa11.46□□□□□ -0.57
TNFRSF1A-215ENST00000543359 ADPRHL1Q8NDY3 354 aa11.46□□□□□ -0.57
TNFRSF1A-215ENST00000543359 OR4D11Q8NGI4 311 aa11.46□□□□□ -0.57
TNFRSF1A-215ENST00000543359 OR1K1Q8NGR3 316 aa11.46□□□□□ -0.57
TNFRSF1A-215ENST00000543359 OR6S1Q8NH40 331 aa11.46□□□□□ -0.57
TNFRSF1A-215ENST00000543359 ZNF417Q8TAU3 575 aa11.46□□□□□ -0.57
TNFRSF1A-215ENST00000543359 TAMM41Q96BW9 452 aa11.46□□□□□ -0.57
TNFRSF1A-215ENST00000543359 SLC47A1Q96FL8 570 aa11.46□□□□□ -0.57
TNFRSF1A-215ENST00000543359 OXGR1Q96P68 337 aa11.46□□□□□ -0.57
TNFRSF1A-215ENST00000543359 ZNF587Q96SQ5 575 aaPredicted RBP11.46□□□□□ -0.57
TNFRSF1A-215ENST00000543359 DHRS9Q9BPW9 319 aa11.46□□□□□ -0.57
TNFRSF1A-215ENST00000543359 LINC00470Q9BZP3 86 aa11.46□□□□□ -0.57
TNFRSF1A-215ENST00000543359 NANOGQ9H9S0 305 aa11.46□□□□□ -0.57
TNFRSF1A-215ENST00000543359 TMEM27Q9HBJ8 222 aa11.46□□□□□ -0.57
TNFRSF1A-215ENST00000543359 ANGPT4Q9Y264 503 aa11.46□□□□□ -0.57
TNFRSF1A-215ENST00000543359 B3GALT5Q9Y2C3 310 aa11.46□□□□□ -0.57
TNFRSF1A-215ENST00000543359 AMDHD2Q9Y303 409 aa11.46□□□□□ -0.57
TNFRSF1A-215ENST00000543359 MXRA5Q9NR99 2828 aa11.46□□□□□ -0.58
TNFRSF1A-215ENST00000543359 OR6C65A6NJZ3 312 aa11.45□□□□□ -0.58
TNFRSF1A-215ENST00000543359 M0R1B8 84 aa11.45□□□□□ -0.58
TNFRSF1A-215ENST00000543359 M0R3H8 397 aa11.45□□□□□ -0.58
TNFRSF1A-215ENST00000543359 AIM2O14862 343 aa11.45□□□□□ -0.58
TNFRSF1A-215ENST00000543359 SMAD7O15105 426 aaKnown RBP11.45□□□□□ -0.58
TNFRSF1A-215ENST00000543359 FMO6PO60774 539 aa11.45□□□□□ -0.58
TNFRSF1A-215ENST00000543359 OPN1SWP03999 348 aa11.45□□□□□ -0.58
TNFRSF1A-215ENST00000543359 C8BP07358 591 aa11.45□□□□□ -0.58
TNFRSF1A-215ENST00000543359 PTNP21246 168 aa11.45□□□□□ -0.58
TNFRSF1A-215ENST00000543359 TTKP33981 857 aa11.45□□□□□ -0.58
TNFRSF1A-215ENST00000543359 PCGF2P35227 344 aa11.45□□□□□ -0.58
TNFRSF1A-215ENST00000543359 CLDN17P56750 224 aa11.45□□□□□ -0.58
TNFRSF1A-215ENST00000543359 KRTAP1-1Q07627 177 aa11.45□□□□□ -0.58
TNFRSF1A-215ENST00000543359 NFYCQ13952 458 aa11.45□□□□□ -0.58
TNFRSF1A-215ENST00000543359 CYP51A1Q16850 503 aa11.45□□□□□ -0.58
TNFRSF1A-215ENST00000543359 TRMT5Q32P41 509 aaKnown RBP11.45□□□□□ -0.58
TNFRSF1A-215ENST00000543359 TBRG1Q3YBR2 411 aa11.45□□□□□ -0.58
TNFRSF1A-215ENST00000543359 SWT1Q5T5J6 900 aaKnown RBP11.45□□□□□ -0.58
TNFRSF1A-215ENST00000543359 NIPAL3Q6P499 406 aa11.45□□□□□ -0.58
TNFRSF1A-215ENST00000543359 WDR88Q6ZMY6 472 aa11.45□□□□□ -0.58
TNFRSF1A-215ENST00000543359 TMEM123Q8N131 208 aa11.45□□□□□ -0.58
TNFRSF1A-215ENST00000543359 ANKK1Q8NFD2 765 aa11.45□□□□□ -0.58
TNFRSF1A-215ENST00000543359 OR6T1Q8NGN1 323 aa11.45□□□□□ -0.58
TNFRSF1A-215ENST00000543359 OR10A6Q8NH74 314 aa11.45□□□□□ -0.58
TNFRSF1A-215ENST00000543359 ZNF837Q96EG3 531 aaPredicted RBP11.45□□□□□ -0.58
TNFRSF1A-215ENST00000543359 MOGAT1Q96PD6 335 aa11.45□□□□□ -0.58
TNFRSF1A-215ENST00000543359 ALKBH3Q96Q83 286 aaPredicted RBP11.45□□□□□ -0.58
TNFRSF1A-215ENST00000543359 TMEM43Q9BTV4 400 aa11.45□□□□□ -0.58
TNFRSF1A-215ENST00000543359 EVA1AQ9H8M9 152 aa11.45□□□□□ -0.58
TNFRSF1A-215ENST00000543359 SAR1AQ9NR31 198 aa11.45□□□□□ -0.58
TNFRSF1A-215ENST00000543359 FGFR1OP2Q9NVK5 253 aa11.45□□□□□ -0.58
TNFRSF1A-215ENST00000543359 RCE1Q9Y256 329 aa11.45□□□□□ -0.58
TNFRSF1A-215ENST00000543359 CR1P17927 2039 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms